Non-Coding RNA Search

Ss1.1-Pig4-TMW8025M13.5

Sequence:


               
               CTTGAATGTTTAACCTACTTACCAAATAAATATCAGAAGCCTGACTTTCATGTTCAAGAA
GATTCTCTTAACGAAATAGCAATTTTTAAAGGGCGGAAACTTTTATTTTCAGGACCTAAG
GGGCGTTTTCCCCTCACAGTTTTTTTTTAATGGGCCACTCCCAGAGCATGCGGAAGTTCC
CAGACCAGGAAATGAACCCGAGTCACAGCAGTGACCCAAAGTGCCACAGTGACAATGCAG
GATCCCTAACCTGCTGCACCCAAGGGAACTCCACCTCTCAGAATTGTTCCCACTCAATAT
TGACTGTCTCATGGACCATCTGAGTTTTCTTTGGCAATTTTAGGCTAATTTTATCTTGGC
CTAATTTTTCTGTAATACTGTTTTTTCCTCACATTCTTCCATCAGGTGGCTGGATTCTAA
GAGGAATGGAAATTATGATCTCATGTGAATAAATAGTGTATGTAGAGGAGTCGAATTCAC
CAGCTGTTTCTATTAGAATTTTCAGACACGTTTGTGTCTCTCTGTGTCCTCAGATTGGGG
CAATATATTGTATATCTTATATGTAGTTGATCCAAGTAGCCAAAGACCTGTCATGAGCTG
AAGCATATATGTCAGAATTCAATGTTTCTTTCTCAAGCCTCCAAAATGACATAGCTGGCA
CCTTGAGAATAGTTACCTAAACTAGGTCTGATATTGAACTGATTTTTTTAGGTGTAAATA
AAATAAAAACTTATAAAAGATGTACTCCACATGACTTTAGTATATATGCAAAGGATTCAA
TCCTCAGAGGATCCAGATTTTCCGTTACACCTTTTGAAGAACTGTATGATTCAAACAGTT
TTGGAACCCCAGCATATGGAATAGAATTTCCCTCCCTCCTTTCTCCTATAAGAACAATCA
CATTTCTGCAGTCTATTATTTGACTGCTTCATTTATTTTTTCTTTTTGTGGTAGCTTCTG
CAGCATATGGAAGTTCCCAGGCCAGGGGCTGGATCAGAGCTGCAGCTACAGGCCTAACCA
CAGCCATGGCAACATCAGGTCCAAGCCACATCTGTGACCTATGCTGCAGCTTGTGGCAAC
ACTGGATTCTTAAGCCACTGAGCCAGGCCAAGGATTGAACCCACATCCTTACAGGGACAA
CTTCAGGTCCTTAATCTGCTGAGCCACAACAGGAAC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CTTGAATGTTTAACCTACTTACCAAATAAATATCAGAAGCCTGACTTTCATGTTCAAGAA
GATTCTCTTAACGAAATAGCAATTTTTAAAGGGCGGAAACTTTTATTTTCAGGACCTAAG
GGGCGTTTTCCCCTCACAGTTTTTTTTTAATGGGCCACTCCCAGAGCATGCGGAAGTTCC
CAGACCAGGAAATGAACCCGAGTCACAGCAGTGACCCAAAGTGCCACAGTGACAATGCAG
GATCCCTAACCTGCTGCACCCAAGGGAACTCCACCTCTCAGAATTGTTCCCACTCAATAT
TGACTGTCTCATGGACCATCTGAGTTTTCTTTGGCAATTTTAGGCTAATTTTATCTTGGC
CTAATTTTTCTGTAATACTGTTTTTTCCTCACATTCTTCCATCAGGTGGCTGGATTCTAA
GAGGAATGGAAATTATGATCTCATGTGAATAAATAGTGTATGTAGAGGAGTCGAATTCAC
CAGCTGTTTCTATTAGAATTTTCAGACACGTTTGTGTCTCTCTGTGTCCTCAGATTGGGG
CAATATATTGTATATCTTATATGTAGTTGATCCAAGTAGCCAAAGACCTGTCATGAGCTG
AAGCATATATGTCAGAATTCAATGTTTCTTTCTCAAGCCTCCAAAATGACATAGCTGGCA
CCTTGAGAATAGTTACCTAAACTAGGTCTGATATTGAACTGATTTTTTTAGGTGTAAATA
AAATAAAAACTTATAAAAGATGTACTCCACATGACTTTAGTATATATGCAAAGGATTCAA
TCCTCAGAGGATCCAGATTTTCCGTTACACCTTTTGAAGAACTGTATGATTCAAACAGTT
TTGGAACCCCAGCATATGGAATAGAATTTCCCTCCCTCCTTTCTCCTATAAGAACAATCA
CATTTCTGCAGTCTATTATTTGACTGCTTCATTTATTTTTTCTTTTTGTGGTAGCTTCTG
CAGCATATGGAAGTTCCCAGGCCAGGGGCTGGATCAGAGCTGCAGCTACAGGCCTAACCA
CAGCCATGGCAACATCAGGTCCAAGCCACATCTGTGACCTATGCTGCAGCTTGTGGCAAC
ACTGGATTCTTAAGCCACTGAGCCAGGCCAAGGATTGAACCCACATCCTTACAGGGACAA
CTTCAGGTCCTTAATCTGCTGAGCCACAACAGGAAC

Aligned organism(s): 2 entry(ies)

More info

Aligned organism(s): 2 entry(ies)

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               452-855, gnl|bosTau2|chr4 (11815253-11814851)
               

               
               452-855, gnl|Hg17|chr7 (23014628-23015324)

Aligned organism(s): 2 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               452-855, gnl|bosTau2|chr4 (11815253-11814851)
               

               
               452-855, gnl|Hg17|chr7 (23014628-23015324)

Expressed library(ies): 3 entry(ies)

More info

Expressed library(ies): 3 entry(ies)

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               fce (0.271592)
               

               
               rec (0.17307)
               

               
               sug (0.127291)

Expressed library(ies): 3 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               fce (0.271592)
               

               
               rec (0.17307)
               

               
               sug (0.127291)

	452-855, gnl\|bosTau2\|chr4 (11815253-11814851)
	452-855, gnl\|Hg17\|chr7 (23014628-23015324)