Ss1.1-Pig4-TMW8025N02.5
|
TAGTATTAACGGAAGACATAGCACCCACGAGAACGAAGCACACTGGATGTGTCAGAGCAA
CTCCTGTCAAGGGGTGTGAGTTCTTCAGTCTAAACGTCTATAGAACTATCTTTTCCATCA
GCTCCCACTGACCATTAATGTTTCTAGCTATTTCTCAAAGGGACTCTGCACAAATTTTTA
AATTGAGAAAATCATATTTATAATAAAGATTTTTATATTCTTATTTTAATTTGGTCATTC
TTACATCATATTGATTTTTCTGGATTATAATTTAGTTCTGTTGAGTCCTTCCCTATAAAA
GCTGAACAAATTGGAATTTTTTATAACAAAGCATTTATAACAGTTTGTTAATGCGAAACT
CTAGCCTGCAGTCTTTTCATTCAGAGGAGCCAATCTTGTAAACCATAACCAAGTACTTTA
GAAAGCCTTCACTGGCATAGATGGAATTTTATGTAGGGCACCTACTGCAGGGAAGAATAG
CTAGTAACTCTGCAAAGCACCACCGGCCATGTTCTCTTAGCATCGTTGCTCAAGTTCCTA
TACTTTTTAAGATAATCAGACTCCCTTAGAGTCTACATGCATGAGGCTTAACTCCCTCTT
CTACAGATATCAGTTTGTTTTAAATACTGCAAAGCAATTAATAGGCCTAAAATGTCTTTG
TCCTATATTATAGTCCATTCAGAGAGTAAAGTTTAAGAACAAATTCTGGGTGCTTCTTGG
TGAATATGTATATGAGTTTAAATTTCATCTTTTTTCTTCAAAGAATAAAATCTTTGATTT
AGCTGTTGCAGCTATTTAGATTTGCTTAGGAATTATAAAAAAAAATTTGCACACATGGTC
ATACACATTCAAAAATTGTAATTTTGAATAAATGCCCACTTTTTCTCCTAGTCTTTTTAG
ATGAATTATATTTGGTTTAGTTATGTTTAAAAGCTTGAAAATTACCTTTATAACAGTGTA
TCTTTCTTTGTCATATGAAACCAGGCATTTAAATGCTTTAATTTTTCAATTTTTATAAAT
GTAAAAGCAATGAATTTTATAATACTGATACTTAAATATTCCAAAATATTAATATTATTA |
Blue-coloured subsequences are predicted RNA structures by RNAz
|
TAGTATTAACGGAAGACATAGCACCCACGAGAACGAAGCACACTGGATGTGTCAGAGCAA
CTCCTGTCAAGGGGTGTGAGTTCTTCAGTCTAAACGTCTATAGAACTATCTTTTCCATCA
GCTCCCACTGACCATTAATGTTTCTAGCTATTTCTCAAAGGGACTCTGCACAAATTTTTA
AATTGAGAAAATCATATTTATAATAAAGATTTTTATATTCTTATTTTAATTTGGTCATTC
TTACATCATATTGATTTTTCTGGATTATAATTTAGTTCTGTTGAGTCCTTCCCTATAAAA
GCTGAACAAATTGGAATTTTTTATAACAAAGCATTTATAACAGTTTGTTAATGCGAAACT
CTAGCCTGCAGTCTTTTCATTCAGAGGAGCCAATCTTGTAAACCATAACCAAGTACTTTA
GAAAGCCTTCACTGGCATAGATGGAATTTTATGTAGGGCACCTACTGCAGGGAAGAATAG
CTAGTAACTCTGCAAAGCACCACCGGCCATGTTCTCTTAGCATCGTTGCTCAAGTTCCTA
TACTTTTTAAGATAATCAGACTCCCTTAGAGTCTACATGCATGAGGCTTAACTCCCTCTT
CTACAGATATCAGTTTGTTTTAAATACTGCAAAGCAATTAATAGGCCTAAAATGTCTTTG
TCCTATATTATAGTCCATTCAGAGAGTAAAGTTTAAGAACAAATTCTGGGTGCTTCTTGG
TGAATATGTATATGAGTTTAAATTTCATCTTTTTTCTTCAAAGAATAAAATCTTTGATTT
AGCTGTTGCAGCTATTTAGATTTGCTTAGGAATTATAAAAAAAAATTTGCACACATGGTC
ATACACATTCAAAAATTGTAATTTTGAATAAATGCCCACTTTTTCTCCTAGTCTTTTTAG
ATGAATTATATTTGGTTTAGTTATGTTTAAAAGCTTGAAAATTACCTTTATAACAGTGTA
TCTTTCTTTGTCATATGAAACCAGGCATTTAAATGCTTTAATTTTTCAATTTTTATAAAT
GTAAAAGCAATGAATTTTATAATACTGATACTTAAATATTCCAAAATATTAATATTATTA |
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1-824, gnl|bosTau2|chr9 (15937069-15937916) |
|
1-824, gnl|Hg17|chr15 (49992216-49994808) |
| |
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855-1080, gnl|bosTau2|chr9 (15937983-15938208) |
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855-1080, gnl|hg17|chr15 (49994822-49995087) |
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855-1080, gnl|Hg17|chr15 (49994845-49995081) |
|
855-1080, gnl|loxAfr1|scaffold_20967 (677-399) |
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855-1080, gnl|mm7|chr9 (75523842-75523611) |
|
855-1080, gnl|panTro1|chr16 (50023399-50023664) |
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855-1080, gnl|rheMac2|chr7 (30208435-30208700) |
|
855-1080, gnl|rn3|chr8 (80328988-80328783) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
1-824, gnl|bosTau2|chr9 (15937069-15937916) |
|
1-824, gnl|Hg17|chr15 (49992216-49994808) |
| |
|
855-1080, gnl|bosTau2|chr9 (15937983-15938208) |
|
855-1080, gnl|hg17|chr15 (49994822-49995087) |
|
855-1080, gnl|Hg17|chr15 (49994845-49995081) |
|
855-1080, gnl|loxAfr1|scaffold_20967 (677-399) |
|
855-1080, gnl|mm7|chr9 (75523842-75523611) |
|
855-1080, gnl|panTro1|chr16 (50023399-50023664) |
|
855-1080, gnl|rheMac2|chr7 (30208435-30208700) |
|
855-1080, gnl|rn3|chr8 (80328988-80328783) |
|
mgp (0.461361) |
|
tra (0.369276) |
|
ret (0.257467) |
|
cbe (0.239234) |
|
cmu (0.186393) |
|
sin (0.174948) |
|
ski (0.146735) |
|
csk (0.140746) |
|
sug (0.127291) |
|
ldo (0.0970026) |
|
mgp (0.461361) |
|
tra (0.369276) |
|
ret (0.257467) |
|
cbe (0.239234) |
|
cmu (0.186393) |
|
sin (0.174948) |
|
ski (0.146735) |
|
csk (0.140746) |
|
sug (0.127291) |
|
ldo (0.0970026) |
