Ss1.1-Pig4-TMW8026A24.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GCTGCCATGGCAGACCAGCGACAGCGTTCACTGTCCACCTCGGGGGAGTCGCTGTACCAC GTGCTGGGGCTGGACAAGAATGCAACCTCGGATGACATCAAGAAGTCCTATCGGAAGCTG GCCTTGAAGTATCACCCTGACAAGAACCCCGATAACCCGGAGGCGGCAGACAAGTTCAAG GAGATCAACAACGCCCACGCCATCCTGACCGACGCCACCAAGAGGAACATTTACGACAAG TACGGCTCGCTGGGTCTCTACGTGGCCGAGCAGTTCGGGGAGGAGAACGTCAACACCTAC TTCGTGCTGTCCAGCTGGTGGGCCAAGGCGCTCTTCGTCTTCTGCGGGCTCCTGACCTGC TGCTACTGCTGCTGCTGCCTGTGCTGCTGCTTCAACTGCTGCTGCGGCCGGTGCAAGCCC AAGGCCCCTGACGGCGAGGAGACCGAGTTCTACGTGTCCCCCGAGGACCTGGAGGCGCAG CTGCAGTCCGACGAGCGGGAGGCCGCAGACGCTCCGATCGCCGTCCAGCCGGCCTCGGCC ACGGAGACCACCCAGCTCACGGCCGACTCGCACCCCAGCTACCACACCGACGGGTTCAAC TAAGTTCAGGAAGAGCTGCAACGAGAGGGTCAGCGCCCGGCCGGCCGCTCAACCTTAGAA TCATGAACTGTAGTCACAGAGCTGGCGCGGGAGCCGCTCCGGCCACGGGAAGGGCAGCGC CCGCCCGCCCGCCTCTGTGCCCGCCCGCCATCCGTCGATCCCGACCCACGAAGCGCGTAG CATGCAGTATTTAAAGCAGTTTAG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GCTGCCATGGCAGACCAGCGACAGCGTTCACTGTCCACCTCGGGGGAGTCGCTGTACCAC GTGCTGGGGCTGGACAAGAATGCAACCTCGGATGACATCAAGAAGTCCTATCGGAAGCTG GCCTTGAAGTATCACCCTGACAAGAACCCCGATAACCCGGAGGCGGCAGACAAGTTCAAG GAGATCAACAACGCCCACGCCATCCTGACCGACGCCACCAAGAGGAACATTTACGACAAG TACGGCTCGCTGGGTCTCTACGTGGCCGAGCAGTTCGGGGAGGAGAACGTCAACACCTAC TTCGTGCTGTCCAGCTGGTGGGCCAAGGCGCTCTTCGTCTTCTGCGGGCTCCTGACCTGC TGCTACTGCTGCTGCTGCCTGTGCTGCTGCTTCAACTGCTGCTGCGGCCGGTGCAAGCCC AAGGCCCCTGACGGCGAGGAGACCGAGTTCTACGTGTCCCCCGAGGACCTGGAGGCGCAG CTGCAGTCCGACGAGCGGGAGGCCGCAGACGCTCCGATCGCCGTCCAGCCGGCCTCGGCC ACGGAGACCACCCAGCTCACGGCCGACTCGCACCCCAGCTACCACACCGACGGGTTCAAC TAAGTTCAGGAAGAGCTGCAACGAGAGGGTCAGCGCCCGGCCGGCCGCTCAACCTTAGAA TCATGAACTGTAGTCACAGAGCTGGCGCGGGAGCCGCTCCGGCCACGGGAAGGGCAGCGC CCGCCCGCCCGCCTCTGTGCCCGCCCGCCATCCGTCGATCCCGACCCACGAAGCGCGTAG CATGCAGTATTTAAAGCAGTTTAG |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 21 entry(ies) | More info |
| Aligned organism(s): 21 entry(ies) | Help | Less info |
| 113-328, gnl|bosTau2|chr11 (52050302-52050087) | |
| 113-328, gnl|canFam2|chr17 (24234755-24234984) | |
| 113-328, gnl|danRer3|chr20 (45744309-45744092) | |
| 113-328, gnl|dasNov1|scaffold_54862 (597-826) | |
| 113-328, gnl|echTel1|scaffold_91286 (915-695) | |
| 113-328, gnl|fr1|chrUn (205547001-205546783) | |
| 113-328, gnl|hg17|chr2 (27412318-27412547) | |
| 113-328, gnl|Hg17|chr2 (27412320-27412535) | |
| 113-328, gnl|loxAfr1|scaffold_3331 (82170-81941) | |
| 113-328, gnl|mm7|chr5 (30142008-30142237) | |
| 113-328, gnl|Mm7|chr5 (30142010-30142225) | |
| 113-328, gnl|monDom2|scaffold_1 (148997857-148997629) | |
| 113-328, gnl|oryCun1|scaffold_203841 (77681-77451) | |
| 113-328, gnl|panTro1|chr12 (28351537-28351766) | |
| 113-328, gnl|rheMac2|chr13 (27247128-27247358) | |
| 113-328, gnl|rn3|chr6 (25244857-25244628) | |
| 113-328, gnl|tetNig1|chr14 (9260657-9260440) | |
| 113-328, gnl|xenTro1|scaffold_777 (461959-462188) | |
| 499-804, gnl|bosTau2|chr13 (35199551-35199275) | |
| 499-804, gnl|Hg17|chr20 (62033261-62033563) | |
| 499-804, gnl|Mm7|chr2 (182050184-182050494) |
| Aligned organism(s): 21 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 113-328, gnl|bosTau2|chr11 (52050302-52050087) | |
| 113-328, gnl|canFam2|chr17 (24234755-24234984) | |
| 113-328, gnl|danRer3|chr20 (45744309-45744092) | |
| 113-328, gnl|dasNov1|scaffold_54862 (597-826) | |
| 113-328, gnl|echTel1|scaffold_91286 (915-695) | |
| 113-328, gnl|fr1|chrUn (205547001-205546783) | |
| 113-328, gnl|hg17|chr2 (27412318-27412547) | |
| 113-328, gnl|Hg17|chr2 (27412320-27412535) | |
| 113-328, gnl|loxAfr1|scaffold_3331 (82170-81941) | |
| 113-328, gnl|mm7|chr5 (30142008-30142237) | |
| 113-328, gnl|Mm7|chr5 (30142010-30142225) | |
| 113-328, gnl|monDom2|scaffold_1 (148997857-148997629) | |
| 113-328, gnl|oryCun1|scaffold_203841 (77681-77451) | |
| 113-328, gnl|panTro1|chr12 (28351537-28351766) | |
| 113-328, gnl|rheMac2|chr13 (27247128-27247358) | |
| 113-328, gnl|rn3|chr6 (25244857-25244628) | |
| 113-328, gnl|tetNig1|chr14 (9260657-9260440) | |
| 113-328, gnl|xenTro1|scaffold_777 (461959-462188) | |
| 499-804, gnl|bosTau2|chr13 (35199551-35199275) | |
| 499-804, gnl|Hg17|chr20 (62033261-62033563) | |
| 499-804, gnl|Mm7|chr2 (182050184-182050494) |
| Expressed library(ies): 6 entry(ies) | More info |
| Expressed library(ies): 6 entry(ies) | Help | Less info |
| fcc (0.197785) | |
| nlu (0.191681) | |
| fty (0.17584) | |
| eep (0.122564) | |
| jej (0.0989218) | |
| eje (0.0988338) |
| Expressed library(ies): 6 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| fcc (0.197785) | |
| nlu (0.191681) | |
| fty (0.17584) | |
| eep (0.122564) | |
| jej (0.0989218) | |
| eje (0.0988338) |