Non-Coding RNA Search

Ss1.1-Pig4-TMW8026D08.5

Sequence:


               
               ATGGACGGGCTCTTCGGCTGCTGCTGACTTTACCTCCACCTGGCTCTCCAGAACGAACTG
TCCTTCATGCCAATCTGGCTGCCTGTCAGTTGCTGCTGGGGCAGCCCCATTTGGCAGCCC
AGAGCTGTGACCGGGTGCTGGAGCGGGAGCCTGGCCATTTAAAGGCCTTGTACCGAAGGG
GGGTTGCCCAGGCTGCTCTTGGGAACCTGGACAAAGCAACTGCTGACCTCAAGAAAGTGC
TGGCAGTAGACCCCAAAAATCGGGCAGCCCAGGAGGAGCTGGGAAAGGTGATCATTCAGG
GGAAGAAACAAGATGCAGGACTGGCTCAGGGACTGCGCAAGATGTTTGGCTAATTAAAAG
TTAAACCTTAAAAGAGACAGGAAC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ATGGACGGGCTCTTCGGCTGCTGCTGACTTTACCTCCACCTGGCTCTCCAGAACGAACTG
TCCTTCATGCCAATCTGGCTGCCTGTCAGTTGCTGCTGGGGCAGCCCCATTTGGCAGCCC
AGAGCTGTGACCGGGTGCTGGAGCGGGAGCCTGGCCATTTAAAGGCCTTGTACCGAAGGG
GGGTTGCCCAGGCTGCTCTTGGGAACCTGGACAAAGCAACTGCTGACCTCAAGAAAGTGC
TGGCAGTAGACCCCAAAAATCGGGCAGCCCAGGAGGAGCTGGGAAAGGTGATCATTCAGG
GGAAGAAACAAGATGCAGGACTGGCTCAGGGACTGCGCAAGATGTTTGGCTAATTAAAAG
TTAAACCTTAAAAGAGACAGGAAC

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-384, gnl|bosTau2|chr23 (23735325-23735708)
               

               
               1-384, gnl|Hg17|chr6 (32204838-32204455)
               

               
               1-384, gnl|Mm7|chr17 (32731316-32731685)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-384, gnl|bosTau2|chr23 (23735325-23735708)
               

               
               1-384, gnl|Hg17|chr6 (32204838-32204455)
               

               
               1-384, gnl|Mm7|chr17 (32731316-32731685)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               cli (0.152812)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cli (0.152812)

	1-384, gnl\|bosTau2\|chr23 (23735325-23735708)
	1-384, gnl\|Hg17\|chr6 (32204838-32204455)
	1-384, gnl\|Mm7\|chr17 (32731316-32731685)