Ss1.1-Pig4-TMW8026K02.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CGGCATAGTTATTGGAAAAACAGATGTCAAAGGCTTTCCAGACAGAAAAAATATTGGATC AGAAAGGTACACTTTCAGTTTCACCATTCGTGATTCAGCAGCCCATTTTGTAAACGTAGC ATCCTGGGGCAATGAAGACTACGTCAGAGCCCTTTCTGACAGCTTTAGAGTTGGCGCGTG TGTGATAATTGAAAACCCCTTGATCCAGATAAAGGACTTGGAAAGAGAAGAAAAGTTCAG CCCTGCAACTCCTAGGTAAACCCAGCGCAGAGTTAACAGTCTTTGTGCCAGAATGGCCGT TACTAAGAAGTTTTTGTGTGTCCGCTGAGCAGAGAGCTTCCTAAAGGTGCATACTTCCCA ACTGAAAATTAGGAGTCTCGTTCTTCCTCACATCACAGTGCTATGATTTTTGCTTTATTT CTCTTTCATTTTGCATCATTCCCTATTGTGGCTCTAATCATTTATCTTTCTGGAAACATA AAAAAATGTGGCTAAATAGATTTCGATAAAAGATGATATTTGAATTGTAATGGGATTTTT AAGAAACTTTACTTTTAGTATAAAATACCAAATCTTTTGTATCCTCAAACCACCCTAGTA TCCCTCTGATGGTACAGTGTAGTATAATAAATGAAAAAGAATAAGACTTTGAAAACAGAT AAATCTGGATTCAAATCCAAGTGCTAACATTTATTTACATTGTGGCTTTGAGACAATTTC TTAGTCCTGTTGGGCCTCAACTGTGAATTAATACCCTATAGATTCTTGTGAATATTAAAT GAGATAATGTACCTGGTATGAAATGTAGAATTTAGTCCCTCAGTAGATGACAGCTCTAGT TTCATACAGGAAACAGGAAAGCTC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CGGCATAGTTATTGGAAAAACAGATGTCAAAGGCTTTCCAGACAGAAAAAATATTGGATC AGAAAGGTACACTTTCAGTTTCACCATTCGTGATTCAGCAGCCCATTTTGTAAACGTAGC ATCCTGGGGCAATGAAGACTACGTCAGAGCCCTTTCTGACAGCTTTAGAGTTGGCGCGTG TGTGATAATTGAAAACCCCTTGATCCAGATAAAGGACTTGGAAAGAGAAGAAAAGTTCAG CCCTGCAACTCCTAGGTAAACCCAGCGCAGAGTTAACAGTCTTTGTGCCAGAATGGCCGT TACTAAGAAGTTTTTGTGTGTCCGCTGAGCAGAGAGCTTCCTAAAGGTGCATACTTCCCA ACTGAAAATTAGGAGTCTCGTTCTTCCTCACATCACAGTGCTATGATTTTTGCTTTATTT CTCTTTCATTTTGCATCATTCCCTATTGTGGCTCTAATCATTTATCTTTCTGGAAACATA AAAAAATGTGGCTAAATAGATTTCGATAAAAGATGATATTTGAATTGTAATGGGATTTTT AAGAAACTTTACTTTTAGTATAAAATACCAAATCTTTTGTATCCTCAAACCACCCTAGTA TCCCTCTGATGGTACAGTGTAGTATAATAAATGAAAAAGAATAAGACTTTGAAAACAGAT AAATCTGGATTCAAATCCAAGTGCTAACATTTATTTACATTGTGGCTTTGAGACAATTTC TTAGTCCTGTTGGGCCTCAACTGTGAATTAATACCCTATAGATTCTTGTGAATATTAAAT GAGATAATGTACCTGGTATGAAATGTAGAATTTAGTCCCTCAGTAGATGACAGCTCTAGT TTCATACAGGAAACAGGAAAGCTC |
| Aligned organism(s): 20 entry(ies) | More info |
| Aligned organism(s): 20 entry(ies) | Help | Less info |
| 51-182, gnl|bosTau2|chr25 (3174506-3174637) | |
| 51-182, gnl|canFam2|chr6 (42095862-42095694) | |
| 51-182, gnl|danRer3|chr12 (13379934-13379773) | |
| 51-182, gnl|dasNov1|scaffold_59758 (4503-4334) | |
| 51-182, gnl|fr1|chrUn (64966794-64966629) | |
| 51-182, gnl|galGal2|chr14 (8099934-8100104) | |
| 51-182, gnl|hg17|chr16 (1851980-1852149) | |
| 51-182, gnl|Hg17|chr16 (1852118-1851987) | |
| 51-182, gnl|loxAfr1|scaffold_14801 (48613-48444) | |
| 51-182, gnl|mm7|chr17 (23001070-23000902) | |
| 51-182, gnl|Mm7|chr17 (23000930-23001061) | |
| 51-182, gnl|monDom2|scaffold_5 (121842662-121842490) | |
| 51-182, gnl|oryCun1|scaffold_86426 (2271-2440) | |
| 51-182, gnl|panTro1|chr18_random (6758124-6757955) | |
| 51-182, gnl|rheMac2|chr20 (1852755-1852924) | |
| 51-182, gnl|rn3|chr10 (14072256-14072088) | |
| 51-182, gnl|tetNig1|chr2 (3609482-3609621) | |
| 51-182, gnl|xenTro1|scaffold_142 (1798947-1799090) | |
| 401-862, gnl|bosTau2|chr25 (3174852-3175300) | |
| 401-862, gnl|Hg17|chr16 (1851457-1850966) |
| Aligned organism(s): 20 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 51-182, gnl|bosTau2|chr25 (3174506-3174637) | |
| 51-182, gnl|canFam2|chr6 (42095862-42095694) | |
| 51-182, gnl|danRer3|chr12 (13379934-13379773) | |
| 51-182, gnl|dasNov1|scaffold_59758 (4503-4334) | |
| 51-182, gnl|fr1|chrUn (64966794-64966629) | |
| 51-182, gnl|galGal2|chr14 (8099934-8100104) | |
| 51-182, gnl|hg17|chr16 (1851980-1852149) | |
| 51-182, gnl|Hg17|chr16 (1852118-1851987) | |
| 51-182, gnl|loxAfr1|scaffold_14801 (48613-48444) | |
| 51-182, gnl|mm7|chr17 (23001070-23000902) | |
| 51-182, gnl|Mm7|chr17 (23000930-23001061) | |
| 51-182, gnl|monDom2|scaffold_5 (121842662-121842490) | |
| 51-182, gnl|oryCun1|scaffold_86426 (2271-2440) | |
| 51-182, gnl|panTro1|chr18_random (6758124-6757955) | |
| 51-182, gnl|rheMac2|chr20 (1852755-1852924) | |
| 51-182, gnl|rn3|chr10 (14072256-14072088) | |
| 51-182, gnl|tetNig1|chr2 (3609482-3609621) | |
| 51-182, gnl|xenTro1|scaffold_142 (1798947-1799090) | |
| 401-862, gnl|bosTau2|chr25 (3174852-3175300) | |
| 401-862, gnl|Hg17|chr16 (1851457-1850966) |
| Expressed library(ies): 3 entry(ies) | More info |
| Expressed library(ies): 3 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| tes (0.207814) | |
| ski (0.146735) | |
| thg (0.126791) |