Non-Coding RNA Search

Ss1.1-Pig4-TMW8026L07.5

Sequence:


               
               TTTAGTAGCTTTTGGCATGTTAGAAGTATTTTTAAATAATGTAATTTTCTACGAATGCAA
ATATCAATTTTTACATTAAAATAATGTTTAATATCAGAGTTATGTTTTAACAACCTTAAA
ATTAAGGTGATATTAAAGAATCTTAAAGTGGTGCTATATAAAACACTATCATGTGATGGT
TATTTTTCTTTAACACAACAATACTGGTTTTAATTCGATTCTTCCAATTATGTTAATTTT
CCTTAATAAAGTCAGGCAACTTCGGTTTTCCAATGAATACTGTATATGCAGCATTTTCTG
TTCTATAGGCAGATTGTCCAAGGAACTTACCTAGATCATGTAATGACTATATAGACTCCA
TCAATCTAAAGTGGTATTTGTAAACAATTTGTTTTTTTTTAAGAGATCATGACTATTTTA
AAAATTATTAATGTACCATTTCAGAAGTTTTGGTAGTGTATTTAATAACTTTACAGTATT
GTCAGTTACCACAAGTTATTTATTCAGTATTGAGGTTTATGTTTCCTTATTTTAAACTAA
AATGTGTTTTCGAAAGAAAAATAATAGTTCACGCAAATGTGCAATCTTAACCTGACTACT
AATGTTTGTAGATTATAAAGCAAGAAATTTTTGAAAGAAACTAAGTGACCCTTTGTCTGA
AGACTACAGTTAAAATCAAAGCTGTACACAGGCTAGTTTTTGAAATAATTGATGCTTCTC
TTCTTTTGTTAAAAGAGACAGTCGTCACATATTTAGTTTAGTTCCACTGTTGATCTTGGC
CTTGAGGGAGATAATATTCACATCTTTGGAAAGTGAAGTCAGTGTTGAAGAAGTACCAGA
AGCTTTATATTTTTAGTGATATGAAATATTTAATGGATCTTTCAAAGAGGAAGAATTTTA
CATACAAGTGGGAATTTATTCTTTTGTAAGACCAAACAATGCTTCTGTATCACTAACTTC
TAGAAATTAAAAAAAAGTAAGTGCTGTTACAGCCAACCTATGATTTCAAATAGATTTTTC
AATATTGTAAACAGTAACTTTTGTGTTGAGAGTAATCGGAAATAAAAGTATATCATCTGG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTTAGTAGCTTTTGGCATGTTAGAAGTATTTTTAAATAATGTAATTTTCTACGAATGCAA
ATATCAATTTTTACATTAAAATAATGTTTAATATCAGAGTTATGTTTTAACAACCTTAAA
ATTAAGGTGATATTAAAGAATCTTAAAGTGGTGCTATATAAAACACTATCATGTGATGGT
TATTTTTCTTTAACACAACAATACTGGTTTTAATTCGATTCTTCCAATTATGTTAATTTT
CCTTAATAAAGTCAGGCAACTTCGGTTTTCCAATGAATACTGTATATGCAGCATTTTCTG
TTCTATAGGCAGATTGTCCAAGGAACTTACCTAGATCATGTAATGACTATATAGACTCCA
TCAATCTAAAGTGGTATTTGTAAACAATTTGTTTTTTTTTAAGAGATCATGACTATTTTA
AAAATTATTAATGTACCATTTCAGAAGTTTTGGTAGTGTATTTAATAACTTTACAGTATT
GTCAGTTACCACAAGTTATTTATTCAGTATTGAGGTTTATGTTTCCTTATTTTAAACTAA
AATGTGTTTTCGAAAGAAAAATAATAGTTCACGCAAATGTGCAATCTTAACCTGACTACT
AATGTTTGTAGATTATAAAGCAAGAAATTTTTGAAAGAAACTAAGTGACCCTTTGTCTGA
AGACTACAGTTAAAATCAAAGCTGTACACAGGCTAGTTTTTGAAATAATTGATGCTTCTC
TTCTTTTGTTAAAAGAGACAGTCGTCACATATTTAGTTTAGTTCCACTGTTGATCTTGGC
CTTGAGGGAGATAATATTCACATCTTTGGAAAGTGAAGTCAGTGTTGAAGAAGTACCAGA
AGCTTTATATTTTTAGTGATATGAAATATTTAATGGATCTTTCAAAGAGGAAGAATTTTA
CATACAAGTGGGAATTTATTCTTTTGTAAGACCAAACAATGCTTCTGTATCACTAACTTC
TAGAAATTAAAAAAAAGTAAGTGCTGTTACAGCCAACCTATGATTTCAAATAGATTTTTC
AATATTGTAAACAGTAACTTTTGTGTTGAGAGTAATCGGAAATAAAAGTATATCATCTGG

Aligned organism(s): 2 entry(ies)

More info

Aligned organism(s): 2 entry(ies)

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               2-971, gnl|bosTau2|chr3 (12087294-12086362)
               

               
               2-971, gnl|Hg17|chr12 (99521926-99522885)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               2-971, gnl|bosTau2|chr3 (12087294-12086362)
               

               
               2-971, gnl|Hg17|chr12 (99521926-99522885)

Expressed library(ies): 5 entry(ies)

More info

Expressed library(ies): 5 entry(ies)

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               lin (0.291206)
               

               
               rec (0.17307)
               

               
               eye (0.170503)
               

               
               nje (0.16592)
               

               
               thg (0.126791)

Expressed library(ies): 5 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               lin (0.291206)
               

               
               rec (0.17307)
               

               
               eye (0.170503)
               

               
               nje (0.16592)
               

               
               thg (0.126791)

	2-971, gnl\|bosTau2\|chr3 (12087294-12086362)
	2-971, gnl\|Hg17\|chr12 (99521926-99522885)

	lin (0.291206)
	rec (0.17307)
	eye (0.170503)
	nje (0.16592)
	thg (0.126791)