Non-Coding RNA Search

Ss1.1-Pig4-TMW8026L24.3

Sequence:


               
               CATGTGAGGGAGTGTCCTAGTTTCATTTTTTTTAAATGCAATTATCCACTTTTCCCAGAA
ACACCTATTGAAGAGACTTTCTTTTCTCCATTGTATATTCTTGTCTCCTTTGTCATAGAT
TGATTGACCATGGATTTATTTCTGGGCTCTCTGTTCGGTTCCATTGATCTATGTGTCTGT
TTTTCTGCCAGCCCCATGCTGTTTTGATCGCTGTAGCTTTATTTTTTTAATTTTATTGAC
GTATAAGCTGATTGACAATGTCGTGTTAATTTTTACTGTACAGCACAGTGATTCAGTTAC
ATATTCTTTTGTATTATGTTTTATCATAGGATATTGAGAGAAATGTTGTTAATTTCCAAA
TATTTGGGGCTGTTAAATCTATGCTATTATTTTTATTACTGCTTTCTAGTTTAATTCTCA
TATTGTCTGGAGCAAACTTTTGAAATGTATTGACCTCAATCAGTTTTATGACCCAACATG
TGGCATACCTAGGTGACGGTTCCATGACTTTAAAGGAATGTGCATCATGAAGTTGTTGTA
TGTAGTGTTTTATAAATGTCAGCTGGACAGGGTGGTTCATGGTGCTGTTCAGATCTAGAT
CATTAATTTTTTTCATCTAGTGCTTTTATCAGTAACGGAGAGGACGTTAAAATCTCTGTG
CGAATTTGTCCATCTCTCCATTGAGTTCTGTCCTGTTTGCTTCCTGTATTTTGAATTTAT
TTGGCTTATACAATTTATAATCGTTATGCCTTCTTGCTTAATGACATTTTTGTTATTATG
AAATGCTCATCTCTAAATATAGCTCTTATCTTTAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CATGTGAGGGAGTGTCCTAGTTTCATTTTTTTTAAATGCAATTATCCACTTTTCCCAGAA
ACACCTATTGAAGAGACTTTCTTTTCTCCATTGTATATTCTTGTCTCCTTTGTCATAGAT
TGATTGACCATGGATTTATTTCTGGGCTCTCTGTTCGGTTCCATTGATCTATGTGTCTGT
TTTTCTGCCAGCCCCATGCTGTTTTGATCGCTGTAGCTTTATTTTTTTAATTTTATTGAC
GTATAAGCTGATTGACAATGTCGTGTTAATTTTTACTGTACAGCACAGTGATTCAGTTAC
ATATTCTTTTGTATTATGTTTTATCATAGGATATTGAGAGAAATGTTGTTAATTTCCAAA
TATTTGGGGCTGTTAAATCTATGCTATTATTTTTATTACTGCTTTCTAGTTTAATTCTCA
TATTGTCTGGAGCAAACTTTTGAAATGTATTGACCTCAATCAGTTTTATGACCCAACATG
TGGCATACCTAGGTGACGGTTCCATGACTTTAAAGGAATGTGCATCATGAAGTTGTTGTA
TGTAGTGTTTTATAAATGTCAGCTGGACAGGGTGGTTCATGGTGCTGTTCAGATCTAGAT
CATTAATTTTTTTCATCTAGTGCTTTTATCAGTAACGGAGAGGACGTTAAAATCTCTGTG
CGAATTTGTCCATCTCTCCATTGAGTTCTGTCCTGTTTGCTTCCTGTATTTTGAATTTAT
TTGGCTTATACAATTTATAATCGTTATGCCTTCTTGCTTAATGACATTTTTGTTATTATG
AAATGCTCATCTCTAAATATAGCTCTTATCTTTAAA

Aligned organism(s): 1 entry(ies)

More info

Aligned organism(s): 1 entry(ies)

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               3-220, gnl|bosTau2|chr11 (67920474-67920698)

Aligned organism(s): 1 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               3-220, gnl|bosTau2|chr11 (67920474-67920698)

Expressed library(ies): 5 entry(ies)

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Expressed library(ies): 5 entry(ies)

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               mgp (0.230681)
               

               
               aor (0.195274)
               

               
               ova (0.129132)
               

               
               tra (0.123092)
               

               
               med (0.116252)

Expressed library(ies): 5 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               mgp (0.230681)
               

               
               aor (0.195274)
               

               
               ova (0.129132)
               

               
               tra (0.123092)
               

               
               med (0.116252)

	mgp (0.230681)
	aor (0.195274)
	ova (0.129132)
	tra (0.123092)
	med (0.116252)