Ss1.1-Pig4-TMW8026M12.5
|
AGGTTAAGGACGTGCGGCCCTTCATCGTGGGCGCCGTCGTGCGGGGCATGGACCTGCGGC
CCGGGAATGCGCTCAAGCGGTTCCTCTCCTGCCAGACAAAGCTGCACGAGGACCTTTGCG
AGAAGAGGACAGCGGCCACCATCGCGACGCACGACCTCAGAGCCATCCGAGGGCCCCTGC
TGTACACCGCCCGCCCGCCGCAGGACCTCAAGATCGTCCCTTTGGGGCGCCGGGAAGTCA
AGGCCAAGGACCTGGTGCGGCAGCTGCAGCTGGAGGCCGAGGAGCACAGGAAGCAGAAGA
AGAGGCAGAATGTGTCGGGCCTGCACAGGTACCTCCACCTGCTGGACGGGCAGGAGCGCT
ACCCGTGCCTCCTGGATGCCGATGGCGACGCGATTTCCTTCCCACCGATAACCAACAGCG
AGAAGACCAAGATAAAGAAAACCACTTGCGATCTGTTCCTGGAGGTGACGAGTGCGGCCA
GCCTGCAGATCTGCAAGGACATCCTGGATGCCCTCATCCTGAAAATGGCAGAACTGAACA
AGTACACTTTGGAAAACAAAGAGGAAAGCTCCCTCTCCGACCCTGAGGCCGATGCCGAGG
CTGGACCCCCTTCGGATGCCAGGGTGGCCCCCACAGCCGAGCAGGACAGGCGCGCCCCAC
TGGTGGTGGAGCAGGTCCGGGTGGTGGACCAGGACGGGCAGCTGAAGGTGGTGTATCCAT
CCAAGACGGACCTGGACCTCGCCGCAGCACACGTGACCGTGACCCGCTGACGCCAGGCCG
CCGGGGCTCCCGGGGTCACAGAGGAAATGACTCCCTCCCCTCTGTGTTTAAGACATGTGC
GTTCTCTGTTCAGTTTTCCAGATGATTCTGCCTTGGGGGGGAGCTTGTTGTCGTGAGCTT
AAATCGTTTTGCCTCTAAGCACCAAACTGGCTTTACTAATGCTTTTTATGAAAGGACTTG
AATGTTGGGATTAACTGCTTGGAGTGTTTTGAAATCATGTAGACACACAGCCAATAACTG
TGTTTCCCCCGAGGAAAAGGATGCTGTAACTGGTTTGAATTCAGGTCTAAGCGGAGAAGC
GAAACAACACGCATTTTACTGGACTGCAGTTATTTTTCTACGATGCTGTACCTTTTAAAG
TCCTCCCGCGCCAGCATGCAGCTCACGCTGTGGGCTGATGTCATGTGTTCCAGTTCCTGA
AAATCATCTTCTCATAAACAAAACGTTACTGTGACG
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
AGGTTAAGGACGTGCGGCCCTTCATCGTGGGCGCCGTCGTGCGGGGCATGGACCTGCGGC
CCGGGAATGCGCTCAAGCGGTTCCTCTCCTGCCAGACAAAGCTGCACGAGGACCTTTGCG
AGAAGAGGACAGCGGCCACCATCGCGACGCACGACCTCAGAGCCATCCGAGGGCCCCTGC
TGTACACCGCCCGCCCGCCGCAGGACCTCAAGATCGTCCCTTTGGGGCGCCGGGAAGTCA
AGGCCAAGGACCTGGTGCGGCAGCTGCAGCTGGAGGCCGAGGAGCACAGGAAGCAGAAGA
AGAGGCAGAATGTGTCGGGCCTGCACAGGTACCTCCACCTGCTGGACGGGCAGGAGCGCT
ACCCGTGCCTCCTGGATGCCGATGGCGACGCGATTTCCTTCCCACCGATAACCAACAGCG
AGAAGACCAAGATAAAGAAAACCACTTGCGATCTGTTCCTGGAGGTGACGAGTGCGGCCA
GCCTGCAGATCTGCAAGGACATCCTGGATGCCCTCATCCTGAAAATGGCAGAACTGAACA
AGTACACTTTGGAAAACAAAGAGGAAAGCTCCCTCTCCGACCCTGAGGCCGATGCCGAGG
CTGGACCCCCTTCGGATGCCAGGGTGGCCCCCACAGCCGAGCAGGACAGGCGCGCCCCAC
TGGTGGTGGAGCAGGTCCGGGTGGTGGACCAGGACGGGCAGCTGAAGGTGGTGTATCCAT
CCAAGACGGACCTGGACCTCGCCGCAGCACACGTGACCGTGACCCGCTGACGCCAGGCCG
CCGGGGCTCCCGGGGTCACAGAGGAAATGACTCCCTCCCCTCTGTGTTTAAGACATGTGC
GTTCTCTGTTCAGTTTTCCAGATGATTCTGCCTTGGGGGGGAGCTTGTTGTCGTGAGCTT
AAATCGTTTTGCCTCTAAGCACCAAACTGGCTTTACTAATGCTTTTTATGAAAGGACTTG
AATGTTGGGATTAACTGCTTGGAGTGTTTTGAAATCATGTAGACACACAGCCAATAACTG
TGTTTCCCCCGAGGAAAAGGATGCTGTAACTGGTTTGAATTCAGGTCTAAGCGGAGAAGC
GAAACAACACGCATTTTACTGGACTGCAGTTATTTTTCTACGATGCTGTACCTTTTAAAG
TCCTCCCGCGCCAGCATGCAGCTCACGCTGTGGGCTGATGTCATGTGTTCCAGTTCCTGA
AAATCATCTTCTCATAAACAAAACGTTACTGTGACG
|
|
gi|12850904|dbj|BAB28889.1| |
Protein identifier
|
gi|12850904|dbj|BAB28889.1| |
|
211-330, gnl|bosTau2|chr16 (35384503-35384622) |
|
211-330, gnl|canFam2|chr5 (61291003-61291130) |
|
211-330, gnl|danRer3|chrUn (140512793-140512670) |
|
211-330, gnl|dasNov1|scaffold_178924 (3428-3285) |
|
211-330, gnl|fr1|chrUn (305782506-305782632) |
|
211-330, gnl|galGal2|chr21 (840402-840246) |
|
211-330, gnl|hg17|chr1 (3723685-3723836) |
|
211-330, gnl|Hg17|chr1 (3723834-3723715) |
|
211-330, gnl|mm7|chr4 (153008030-153007910) |
|
211-330, gnl|Mm7|chr4 (153007910-153008035) |
|
211-330, gnl|monDom2|scaffold_78 (6476869-6476744) |
|
211-330, gnl|panTro1|chr1 (3578071-3578222) |
|
211-330, gnl|rn3|chr5 (170815928-170815808) |
|
211-330, gnl|tetNig1|chrUn_random (28869174-28869049) |
|
211-330, gnl|xenTro1|scaffold_503 (698134-698260) |
| |
|
521-782, gnl|bosTau2|chr16 (35385491-35385753) |
|
521-782, gnl|Hg17|chr1 (3721058-3720799) |
|
521-782, gnl|Mm7|chr4 (153009172-153009424) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
211-330, gnl|bosTau2|chr16 (35384503-35384622) |
|
211-330, gnl|canFam2|chr5 (61291003-61291130) |
|
211-330, gnl|danRer3|chrUn (140512793-140512670) |
|
211-330, gnl|dasNov1|scaffold_178924 (3428-3285) |
|
211-330, gnl|fr1|chrUn (305782506-305782632) |
|
211-330, gnl|galGal2|chr21 (840402-840246) |
|
211-330, gnl|hg17|chr1 (3723685-3723836) |
|
211-330, gnl|Hg17|chr1 (3723834-3723715) |
|
211-330, gnl|mm7|chr4 (153008030-153007910) |
|
211-330, gnl|Mm7|chr4 (153007910-153008035) |
|
211-330, gnl|monDom2|scaffold_78 (6476869-6476744) |
|
211-330, gnl|panTro1|chr1 (3578071-3578222) |
|
211-330, gnl|rn3|chr5 (170815928-170815808) |
|
211-330, gnl|tetNig1|chrUn_random (28869174-28869049) |
|
211-330, gnl|xenTro1|scaffold_503 (698134-698260) |
| |
|
521-782, gnl|bosTau2|chr16 (35385491-35385753) |
|
521-782, gnl|Hg17|chr1 (3721058-3720799) |
|
521-782, gnl|Mm7|chr4 (153009172-153009424) |
|
hea (0.613497) |
|
fcc (0.39557) |
|
cag (0.302389) |
|
cte (0.29274) |
|
aor (0.195274) |
|
nep (0.183925) |
|
fbs (0.175346) |
|
sin (0.174948) |
|
pty (0.142714) |
|
csk (0.140746) |
|
hlv (0.139256) |
|
che (0.136314) |
|
ste (0.135208) |
|
pla (0.133672) |
|
ova (0.129132) |
|
bla (0.124347) |
|
cly (0.120642) |
|
ebs (0.118301) |
|
cty (0.10408) |
|
jej (0.0989218) |
|
hea (0.613497) |
|
fcc (0.39557) |
|
cag (0.302389) |
|
cte (0.29274) |
|
aor (0.195274) |
|
nep (0.183925) |
|
fbs (0.175346) |
|
sin (0.174948) |
|
pty (0.142714) |
|
csk (0.140746) |
|
hlv (0.139256) |
|
che (0.136314) |
|
ste (0.135208) |
|
pla (0.133672) |
|
ova (0.129132) |
|
bla (0.124347) |
|
cly (0.120642) |
|
ebs (0.118301) |
|
cty (0.10408) |
|
jej (0.0989218) |
