Non-Coding RNA Search

Ss1.1-Pig4-TMW8026M22.5

Sequence:


               
               CTATAACAACATCCAAGATCACATACTTTAAGAGGAAGTATGTGGAAGAAGAGGATTTTC
ACCCACCACTCAGCAGCTGTAGCCATAAAACCATCTCGATCTTTGAGGAGCGCGCGCACA
TCCTTTATATGTCCTTAGAAAAGCTAAAGTTTATCGATGACCCTGAGGTGTACCTCCGAC
GATCGGTCCTGATCAACAACTTGATGAAAAGAATCCATGGGGAGATTATCATGCAGAATA
ACTGGTGCTTTCCCGCCTGCTCTTTCAATGGCGCCTCCGCCCAGGAGTGGTTTATGGCTC
AAGACTGTCCTTACCGAAAACGACCTCGGATGGCCAAAGAGGAGTGTGAAAAGTTTCATG
CCTGCTGCTTTTACCAAGAATGTGGTGGTCACTACCTAAATTTACCCCTGTCTGTCAATG
CTAACGTCGGAAGTGCCTCCTCCTCCTCCTCCTCTTCCTCCTCTTCCTCTCCCTCTCCCC
CTCCGCCTTTACCGAGTTGCTCCCACCAGGTGGATTTTGATGTAGGCAGCACACCTCTCT
ACAAGGGCGATGGCCAGATACCTGCCAATGAAACATACCTGTCTAGGGCAGCAGTCAACA
ATATGAGTAGAGAGTGGTCCCTGCCAGTTCCCAGCTTGCCTAGGACGGGTGATGAGGCTT
TTAGAGAGGTATTATACAGGGCGATTTTTGGTGCCTTACTTTATCTTAATTTTTGCCAAT
GTGAAAATTAAGGATAAATCAGAGTACAGCAGGGATTTAACAAACAGGAAAAAAAAAAGA
ACACAGGGTGGATCAGTATTGTTTGGAAGTCGTTAC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CTATAACAACATCCAAGATCACATACTTTAAGAGGAAGTATGTGGAAGAAGAGGATTTTC
ACCCACCACTCAGCAGCTGTAGCCATAAAACCATCTCGATCTTTGAGGAGCGCGCGCACA
TCCTTTATATGTCCTTAGAAAAGCTAAAGTTTATCGATGACCCTGAGGTGTACCTCCGAC
GATCGGTCCTGATCAACAACTTGATGAAAAGAATCCATGGGGAGATTATCATGCAGAATA
ACTGGTGCTTTCCCGCCTGCTCTTTCAATGGCGCCTCCGCCCAGGAGTGGTTTATGGCTC
AAGACTGTCCTTACCGAAAACGACCTCGGATGGCCAAAGAGGAGTGTGAAAAGTTTCATG
CCTGCTGCTTTTACCAAGAATGTGGTGGTCACTACCTAAATTTACCCCTGTCTGTCAATG
CTAACGTCGGAAGTGCCTCCTCCTCCTCCTCCTCTTCCTCCTCTTCCTCTCCCTCTCCCC
CTCCGCCTTTACCGAGTTGCTCCCACCAGGTGGATTTTGATGTAGGCAGCACACCTCTCT
ACAAGGGCGATGGCCAGATACCTGCCAATGAAACATACCTGTCTAGGGCAGCAGTCAACA
ATATGAGTAGAGAGTGGTCCCTGCCAGTTCCCAGCTTGCCTAGGACGGGTGATGAGGCTT
TTAGAGAGGTATTATACAGGGCGATTTTTGGTGCCTTACTTTATCTTAATTTTTGCCAAT
GTGAAAATTAAGGATAAATCAGAGTACAGCAGGGATTTAACAAACAGGAAAAAAAAAAGA
ACACAGGGTGGATCAGTATTGTTTGGAAGTCGTTAC

Coded protein: 1 entry(ies)

More info

Coded protein: 1 entry(ies)

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               gi|7263934|emb|CAB81635.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|7263934|emb|CAB81635.1|

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               90-573, gnl|bosTau2|chr13 (21468644-21468152)
               

               
               90-573, gnl|Hg17|chr1 (206803298-206803799)
               

               
               90-573, gnl|Mm7|chr1 (192399834-192399270)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               90-573, gnl|bosTau2|chr13 (21468644-21468152)
               

               
               90-573, gnl|Hg17|chr1 (206803298-206803799)
               

               
               90-573, gnl|Mm7|chr1 (192399834-192399270)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               liv (0.146284)
               

               
               cty (0.10408)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               liv (0.146284)
               

               
               cty (0.10408)

	90-573, gnl\|bosTau2\|chr13 (21468644-21468152)
	90-573, gnl\|Hg17\|chr1 (206803298-206803799)
	90-573, gnl\|Mm7\|chr1 (192399834-192399270)