Non-Coding RNA Search

Ss1.1-Pig4-TMW8026N20.3

Sequence:


               
               TCCGCTGAGTTCTCCTTGATCCCCACGGGTCCTCTGCCGTGGCCTAGAGGAAGCTAGCAG
AGCGGAGGCAGACAGATCTGACAGACTGAGTCCACACGGCAGCTCTGTCTTAAGGAGAAT
CAGAAAGGAGAGAGGCAGCCGGGCCCGGGTGGAGCACGCGCCGTCTTCCTCCCCTCTCCT
CTTCCCTGGGGTCAGCCCGACACTGACCCCAGACAGCAGGCCGGCCACCTTCCCACCTGC
TCAGGCAGGTTCACCAAGATGATCGTCTAGACGCCGGGCCTGCGCTCTTGAATCTGCTGG
CAAGGAGCCCTGCTAACGATACACTGCCCACCCCTCTAGAGAGTCTGAAGTGCCCCCCAT
CTCACCTGAGACTGGAGCGTTTTAAATCGTGTCGACCAGGTGATGCTTGCTTTATGTGAG
AAGGACTTCTGCAGAATGGATACACATGTTCAAAGCAGTCTTTTCATATCTATGTATTAT
CTCTATTAAAAGTGATAAAGTCATGTTTCTGGGGCGTATTCAAGTAGACGACAAGTAATT
ATTTAATAATAGTACATTGAGTGCATTGTAATTATTCTCGCAGTAGTCAGGTAATAGTAT
CCAACAGAAATTTCCTACCAACCT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TCCGCTGAGTTCTCCTTGATCCCCACGGGTCCTCTGCCGTGGCCTAGAGGAAGCTAGCAG
AGCGGAGGCAGACAGATCTGACAGACTGAGTCCACACGGCAGCTCTGTCTTAAGGAGAAT
CAGAAAGGAGAGAGGCAGCCGGGCCCGGGTGGAGCACGCGCCGTCTTCCTCCCCTCTCCT
CTTCCCTGGGGTCAGCCCGACACTGACCCCAGACAGCAGGCCGGCCACCTTCCCACCTGC
TCAGGCAGGTTCACCAAGATGATCGTCTAGACGCCGGGCCTGCGCTCTTGAATCTGCTGG
CAAGGAGCCCTGCTAACGATACACTGCCCACCCCTCTAGAGAGTCTGAAGTGCCCCCCAT
CTCACCTGAGACTGGAGCGTTTTAAATCGTGTCGACCAGGTGATGCTTGCTTTATGTGAG
AAGGACTTCTGCAGAATGGATACACATGTTCAAAGCAGTCTTTTCATATCTATGTATTAT
CTCTATTAAAAGTGATAAAGTCATGTTTCTGGGGCGTATTCAAGTAGACGACAAGTAATT
ATTTAATAATAGTACATTGAGTGCATTGTAATTATTCTCGCAGTAGTCAGGTAATAGTAT
CCAACAGAAATTTCCTACCAACCT

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               102-624, gnl|bosTau2|chr19 (41307931-41307400)
               

               
               102-624, gnl|Hg17|chr17 (42195806-42195262)
               

               
               102-624, gnl|Mm7|chr11 (103926328-103926847)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               102-624, gnl|bosTau2|chr19 (41307931-41307400)
               

               
               102-624, gnl|Hg17|chr17 (42195806-42195262)
               

               
               102-624, gnl|Mm7|chr11 (103926328-103926847)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               ski (0.29347)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ski (0.29347)

	102-624, gnl\|bosTau2\|chr19 (41307931-41307400)
	102-624, gnl\|Hg17\|chr17 (42195806-42195262)
	102-624, gnl\|Mm7\|chr11 (103926328-103926847)