Ss1.1-Pig4-TMW8026P16.3
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GCAGTTGAAAGCACACTTGGATGAGGCTCGGACCCTGCTTCATGGCACCAGGGGGACCCA CCAGCGCCAAGTTGAGCTCATTGAGCGGGATGAGGTTAGTCTTCATAAGAAGCTGAGGAC TGAAGTGATCCAGCTCGAAGATACACTGGCCCAGGTCCGCAAGGAGTATGAAATGCTGAG GATAGAATTTGAGCAGACCCTTGCTGCCAATGAACAAGCAGGCCCCATAAACCGGGAGAT GCGTCACCTCATCAGTAGCCTCCAGAATCACAATCACCAGCTGAAAGGGGAGGTTCTGAG GTATAAGCGGAAACTGAGAGAAGCCCAGTCTGACCTGAACAAGACTCGATTGCGCAGTGG CAGTGCCCTCTTGCAGTCTCAGTCCAGTACTGAGGACCCCAAAGAAGAGCCTGCAGAGCT AAAACAAGATCCTGAGGACTTACCCGCCCAGTCCGCTACCTCGAAGACATCTCAGGAGGA AGTCAATGAAATTAAGTCCAAAAGGGATGAGGAAGAGCGAGAACGAGAAAGGAGGGAGAA AGAGAGAGAACGGGAAAGAGAGCGGGAGAAGGAAAAGGAGAGAGAACGTGAGAAGCAGAA ACTAAAAGAGTCAGAAAAAGAAAGAGATTCTGCTAAGGATAAAGAGAAAGGGAAACATGA TGATGGAAGGAAAAAGGAAGCAGAAATTATCACACCCTTGAAGATTGAACTCAAGAAGGC ACAGGAGAGCCAAAAGGAGATGAAACTATTGCTAGATATGTACCGCTCTGCCCCAAAGGA ACAGAGAGACAAAGTTCAGCTAATGGCAGCTGAGAAGAAGTCTAAGGCAGAGTTGGAAGA TTTGAGGCAAAGACTTAAGGACCT |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GCAGTTGAAAGCACACTTGGATGAGGCTCGGACCCTGCTTCATGGCACCAGGGGGACCCA CCAGCGCCAAGTTGAGCTCATTGAGCGGGATGAGGTTAGTCTTCATAAGAAGCTGAGGAC TGAAGTGATCCAGCTCGAAGATACACTGGCCCAGGTCCGCAAGGAGTATGAAATGCTGAG GATAGAATTTGAGCAGACCCTTGCTGCCAATGAACAAGCAGGCCCCATAAACCGGGAGAT GCGTCACCTCATCAGTAGCCTCCAGAATCACAATCACCAGCTGAAAGGGGAGGTTCTGAG GTATAAGCGGAAACTGAGAGAAGCCCAGTCTGACCTGAACAAGACTCGATTGCGCAGTGG CAGTGCCCTCTTGCAGTCTCAGTCCAGTACTGAGGACCCCAAAGAAGAGCCTGCAGAGCT AAAACAAGATCCTGAGGACTTACCCGCCCAGTCCGCTACCTCGAAGACATCTCAGGAGGA AGTCAATGAAATTAAGTCCAAAAGGGATGAGGAAGAGCGAGAACGAGAAAGGAGGGAGAA AGAGAGAGAACGGGAAAGAGAGCGGGAGAAGGAAAAGGAGAGAGAACGTGAGAAGCAGAA ACTAAAAGAGTCAGAAAAAGAAAGAGATTCTGCTAAGGATAAAGAGAAAGGGAAACATGA TGATGGAAGGAAAAAGGAAGCAGAAATTATCACACCCTTGAAGATTGAACTCAAGAAGGC ACAGGAGAGCCAAAAGGAGATGAAACTATTGCTAGATATGTACCGCTCTGCCCCAAAGGA ACAGAGAGACAAAGTTCAGCTAATGGCAGCTGAGAAGAAGTCTAAGGCAGAGTTGGAAGA TTTGAGGCAAAGACTTAAGGACCT |
| Aligned organism(s): 22 entry(ies) | More info |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
| 84-222, gnl|bosTau2|chr8 (50218511-50218649) | |
| 84-222, gnl|canFam2|chr11 (61286172-61286346) | |
| 84-222, gnl|danRer3|chr12 (23637649-23637814) | |
| 84-222, gnl|dasNov1|scaffold_7245 (4844-4676) | |
| 84-222, gnl|echTel1|scaffold_298700 (14917-15088) | |
| 84-222, gnl|fr1|chrUn (51946187-51946349) | |
| 84-222, gnl|galGal2|chrZ (27608250-27608419) | |
| 84-222, gnl|hg17|chr9 (101393497-101393671) | |
| 84-222, gnl|Hg17|chr9 (101393519-101393657) | |
| 84-222, gnl|loxAfr1|scaffold_145259 (4708-4882) | |
| 84-222, gnl|mm7|chr4 (49663065-49663234) | |
| 84-222, gnl|Mm7|chr4 (49663082-49663220) | |
| 84-222, gnl|monDom2|scaffold_5 (85463913-85464090) | |
| 84-222, gnl|oryCun1|scaffold_197424 (18163-18340) | |
| 84-222, gnl|panTro1|chr11 (85641559-85641733) | |
| 84-222, gnl|rheMac2|chr15 (34658190-34658016) | |
| 84-222, gnl|rn3|chr5 (66395531-66395700) | |
| 84-222, gnl|tetNig1|chr1 (391202-391041) | |
| 84-222, gnl|xenTro1|scaffold_958 (160656-160814) | |
| 342-715, gnl|bosTau2|chr8 (50219445-50219818) | |
| 342-715, gnl|Hg17|chr9 (101394218-101394591) | |
| 342-715, gnl|Mm7|chr4 (49663775-49664142) |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 84-222, gnl|bosTau2|chr8 (50218511-50218649) | |
| 84-222, gnl|canFam2|chr11 (61286172-61286346) | |
| 84-222, gnl|danRer3|chr12 (23637649-23637814) | |
| 84-222, gnl|dasNov1|scaffold_7245 (4844-4676) | |
| 84-222, gnl|echTel1|scaffold_298700 (14917-15088) | |
| 84-222, gnl|fr1|chrUn (51946187-51946349) | |
| 84-222, gnl|galGal2|chrZ (27608250-27608419) | |
| 84-222, gnl|hg17|chr9 (101393497-101393671) | |
| 84-222, gnl|Hg17|chr9 (101393519-101393657) | |
| 84-222, gnl|loxAfr1|scaffold_145259 (4708-4882) | |
| 84-222, gnl|mm7|chr4 (49663065-49663234) | |
| 84-222, gnl|Mm7|chr4 (49663082-49663220) | |
| 84-222, gnl|monDom2|scaffold_5 (85463913-85464090) | |
| 84-222, gnl|oryCun1|scaffold_197424 (18163-18340) | |
| 84-222, gnl|panTro1|chr11 (85641559-85641733) | |
| 84-222, gnl|rheMac2|chr15 (34658190-34658016) | |
| 84-222, gnl|rn3|chr5 (66395531-66395700) | |
| 84-222, gnl|tetNig1|chr1 (391202-391041) | |
| 84-222, gnl|xenTro1|scaffold_958 (160656-160814) | |
| 342-715, gnl|bosTau2|chr8 (50219445-50219818) | |
| 342-715, gnl|Hg17|chr9 (101394218-101394591) | |
| 342-715, gnl|Mm7|chr4 (49663775-49664142) |
| Expressed library(ies): 2 entry(ies) | More info |
| Expressed library(ies): 2 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| eye (0.341006) | |
| nmm (0.132802) |