Non-Coding RNA Search

Ss1.1-Pig4-TMW8027C01.3

Sequence:


               
               GGTACGAGCCAGCGAGTGCCTGCCGCGTCCCCCTCGGCTCACAGCATCAGCGCCAGCACG
CCCGACCGGACCCGCTTCCCCCGGGGCAGCTCGAGCCGCAGCACCTTCCACGGGGAGCAG
CTCCGCGAGCGCCGCAGCGCCGCCTACAGCGGGCCGCCCGCCTCCCCCTCGCACGAGCCC
GGCGCCTTCGCCCACGCCCGGAGGGGCACGTCCACCGGTATCATAAGCAAACTCACCTCC
AAATTCGTCCGCAGAAGTACCACAGGGGAACCAAAAGAAAGAGACAAGGACGAGGGCAAA
GACTCCAAGCCCCGCTCTCTGCGGTTCACATGGAGCATGAAGACCACCAGTTCCATGGAC
CCCAATGACATGATGAGAGAAATTCGCAAAGTGTTAGATGCCAACAACTGTGATTATGAA
CAAAAAGAGAGGTTTCTGCTTTTCTGCGTCCATGGCGACGCCAGGCAGGACAGCCTCGTG
CAGTGGGAGATGGAGGTCTGCAAGCTGCCCCGACTGTCCCTCAACGGCGTTCGCTTCAAG
CGAATATCCGGGACCTCTATTGCCTTTAAGAACATTGCATCCAAAATAGCCAACGAGCTT
AAGCTGTAACGCAGCTCGGACCTAGAGGAGCAGGGAAGATACGTCCGTGTGAGGTACAGG
TTTGGAATGTACTGGTAAATGCCCAATGTGATTGGCCCGTGGCTCTCCCCATGTAGAATT
TGCCCTTATCGCAATAAGGTTATACATAGTCATGAACTGTAAAATGAAAGTCCGTATGAA
CTATAATAAATACCTGTAGCTAAAAAAAGTAGGTTCACATGTACAGGTAAGTATATTGTG
TATTTCTGTTCATTTTCTGTTTATAGAGTTGTATAATAAAACAGATGATTGCTTACAAAC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGTACGAGCCAGCGAGTGCCTGCCGCGTCCCCCTCGGCTCACAGCATCAGCGCCAGCACG
CCCGACCGGACCCGCTTCCCCCGGGGCAGCTCGAGCCGCAGCACCTTCCACGGGGAGCAG
CTCCGCGAGCGCCGCAGCGCCGCCTACAGCGGGCCGCCCGCCTCCCCCTCGCACGAGCCC
GGCGCCTTCGCCCACGCCCGGAGGGGCACGTCCACCGGTATCATAAGCAAACTCACCTCC
AAATTCGTCCGCAGAAGTACCACAGGGGAACCAAAAGAAAGAGACAAGGACGAGGGCAAA
GACTCCAAGCCCCGCTCTCTGCGGTTCACATGGAGCATGAAGACCACCAGTTCCATGGAC
CCCAATGACATGATGAGAGAAATTCGCAAAGTGTTAGATGCCAACAACTGTGATTATGAA
CAAAAAGAGAGGTTTCTGCTTTTCTGCGTCCATGGCGACGCCAGGCAGGACAGCCTCGTG
CAGTGGGAGATGGAGGTCTGCAAGCTGCCCCGACTGTCCCTCAACGGCGTTCGCTTCAAG
CGAATATCCGGGACCTCTATTGCCTTTAAGAACATTGCATCCAAAATAGCCAACGAGCTT
AAGCTGTAACGCAGCTCGGACCTAGAGGAGCAGGGAAGATACGTCCGTGTGAGGTACAGG
TTTGGAATGTACTGGTAAATGCCCAATGTGATTGGCCCGTGGCTCTCCCCATGTAGAATT
TGCCCTTATCGCAATAAGGTTATACATAGTCATGAACTGTAAAATGAAAGTCCGTATGAA
CTATAATAAATACCTGTAGCTAAAAAAAGTAGGTTCACATGTACAGGTAAGTATATTGTG
TATTTCTGTTCATTTTCTGTTTATAGAGTTGTATAATAAAACAGATGATTGCTTACAAAC

Coded protein: 1 entry(ies)

More info

Coded protein: 1 entry(ies)

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               Q9H051_HUMAN

Coded protein: 1 entry(ies)

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Protein identifier


               
               Q9H051_HUMAN

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               252-898, gnl|bosTau2|chr16 (10974560-10973914)
               

               
               252-898, gnl|Hg17|chr1 (217223546-217224191)
               

               
               252-898, gnl|Mm7|chr1 (184424460-184423824)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               252-898, gnl|bosTau2|chr16 (10974560-10973914)
               

               
               252-898, gnl|Hg17|chr1 (217223546-217224191)
               

               
               252-898, gnl|Mm7|chr1 (184424460-184423824)

Expressed library(ies): 8 entry(ies)

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Expressed library(ies): 8 entry(ies)

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               cmu (0.186393)
               

               
               cki (0.165235)
               

               
               fco (0.157208)
               

               
               che (0.136314)
               

               
               thg (0.126791)
               

               
               eep (0.122564)
               

               
               ecc (0.115035)
               

               
               spc (0.113366)

Expressed library(ies): 8 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cmu (0.186393)
               

               
               cki (0.165235)
               

               
               fco (0.157208)
               

               
               che (0.136314)
               

               
               thg (0.126791)
               

               
               eep (0.122564)
               

               
               ecc (0.115035)
               

               
               spc (0.113366)

	252-898, gnl\|bosTau2\|chr16 (10974560-10973914)
	252-898, gnl\|Hg17\|chr1 (217223546-217224191)
	252-898, gnl\|Mm7\|chr1 (184424460-184423824)

	cmu (0.186393)
	cki (0.165235)
	fco (0.157208)
	che (0.136314)
	thg (0.126791)
	eep (0.122564)
	ecc (0.115035)
	spc (0.113366)