Non-Coding RNA Search

Ss1.1-Pig4-TMW8027C05.5

Sequence:


               
               CAGTCTAAGCTTTGTGTCCATCATACTGTTAAATGAAACAAAGGGTGGGGGGTGTAATAC
AGTCCTGCCATTGCCTACCAGTAGGAGAGTCCAAACAGAACACTCTTTTGAGTAGCAATT
ATTTAATTTGCCCAGTCAAGGCACCGTGTTTATATACTATTTCACATTGAATTTGATTAT
GCCCTACAGACCTGGCTGGTCAAGGATTTGATATACACATATTGGCTTGGGATTCGAGCT
TTCTTTTTTATTTAAATAAAAATTTATATATATTGGGTATGTTTTATGGATTTTTTCGCG
AGCGCAGCTGTTGCAATAAAATGACTGATTGGGAGGTAGAAGCACTGAATGAAGATGAGG
CATTTTATCAGTTGATATCCATATTTTCATTTTTTTTTAAATACACTTGCTTGTTTGCCT
TTTTTGTTTGTTTTCTTTGTGTGTGTGCTTAATATAACCCCCTTACATTTAATCTTTAAG
TGCTTATTGTTTTTGGGGGGAGAAGGAGAGAAACTTTTTTATGTCTGACAGAGTCCCAAG
GTTTTCCATTTCTCTTATAACCGTAAAAGGCAACATTCTTGGCCTCTAACCTTCTGTAGG
CAGATTTGGGCAGATCTTATTTCTCCTTTAGCTAATTCCTAGATTTTAGAAGAAATTTTG
GTTCAACTTTGAACTCAAAATGATCTGGTATTGCAAAGGAATTTATAGGTATTGATTTTG
TTGATGTTTGGAATAAAAGTAAAATTCCATTTTGAGTATCTAATGAAACTCCTAATAACT
CATTAAATTGTT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CAGTCTAAGCTTTGTGTCCATCATACTGTTAAATGAAACAAAGGGTGGGGGGTGTAATAC
AGTCCTGCCATTGCCTACCAGTAGGAGAGTCCAAACAGAACACTCTTTTGAGTAGCAATT
ATTTAATTTGCCCAGTCAAGGCACCGTGTTTATATACTATTTCACATTGAATTTGATTAT
GCCCTACAGACCTGGCTGGTCAAGGATTTGATATACACATATTGGCTTGGGATTCGAGCT
TTCTTTTTTATTTAAATAAAAATTTATATATATTGGGTATGTTTTATGGATTTTTTCGCG
AGCGCAGCTGTTGCAATAAAATGACTGATTGGGAGGTAGAAGCACTGAATGAAGATGAGG
CATTTTATCAGTTGATATCCATATTTTCATTTTTTTTTAAATACACTTGCTTGTTTGCCT
TTTTTGTTTGTTTTCTTTGTGTGTGTGCTTAATATAACCCCCTTACATTTAATCTTTAAG
TGCTTATTGTTTTTGGGGGGAGAAGGAGAGAAACTTTTTTATGTCTGACAGAGTCCCAAG
GTTTTCCATTTCTCTTATAACCGTAAAAGGCAACATTCTTGGCCTCTAACCTTCTGTAGG
CAGATTTGGGCAGATCTTATTTCTCCTTTAGCTAATTCCTAGATTTTAGAAGAAATTTTG
GTTCAACTTTGAACTCAAAATGATCTGGTATTGCAAAGGAATTTATAGGTATTGATTTTG
TTGATGTTTGGAATAAAAGTAAAATTCCATTTTGAGTATCTAATGAAACTCCTAATAACT
CATTAAATTGTT

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-273, gnl|bosTau2|chr21 (47605197-47604913)
               

               
               1-273, gnl|Hg17|chr1 (170638035-170637755)
               

               
               1-273, gnl|Mm7|chr1 (160931589-160931885)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-273, gnl|bosTau2|chr21 (47605197-47604913)
               

               
               1-273, gnl|Hg17|chr1 (170638035-170637755)
               

               
               1-273, gnl|Mm7|chr1 (160931589-160931885)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               fty (0.17584)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               fty (0.17584)

	1-273, gnl\|bosTau2\|chr21 (47605197-47604913)
	1-273, gnl\|Hg17\|chr1 (170638035-170637755)
	1-273, gnl\|Mm7\|chr1 (160931589-160931885)