Non-Coding RNA Search

Ss1.1-Pig4-TMW8027E18.5

Sequence:


               
               TAATTATGCCACTTGTTCAGATTCTGTGCTGATTAAGCAATTTTCATGATTATAATTTGG
CTATAAGAAAAGAATATGCTCCTCATGTAGAAACAAGTATTCTGGTTACATAGATGAGTA
TGTTTCTTATAATAAATTAAATTGGCATGTTTAAGATTATTTACATCTCATTATATGTCA
GCTATGCTGAATGCCTTTGTAATTTATCTTTGCACAATTGACTCATCGTTTCCTTACCAA
CCATAATTTTTAGTCACAGAAGCTGCAGTGAATTTGCTCAGGGCCCTTAAGCATGGTTTG
TTCCTATGGCAAAGAGCCTAACAAAAGATTGATAGTATGGACATGTTCCTGGCAGTAGGC
ATGAACATTAAGTATGCGTTTGGAGAAGTATTAGAGAATATGATAAAAATCAGTGGTTGT
AGTGAGGAGAAACTCCCTTATTTTCTAATTGTACTAGAGAATTGCTTTAGTCAGTTCAGA
AATAGCAGCATCTATATGCTTTGTCTTGGTCCTGAGGCATGGTTGCTGGAAGTTGGCAAC
AATGGGCCAACAAAGGATTTTTACACTCCTTGAAGTCGTATAACTAGAGAGATTTGCATG
AAGAATTTGTAATTGAAAAGCATGCGTGCCTACTTTTAGTAGCCTGGAAGTTGATAGTAA
TGTCATTAACCATAGGATATAAGATATTTTAACTGAGAATAATAGCTTAATATCTAAAAA
GAACTTTTGCATCACTAAAGAAGAAAAATGTCTTGCTGGGAACAAGTTTAGGAAATGAAT
GTACTTTTTTTTTATCTTCTTGGGAGAAAAGTATCC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TAATTATGCCACTTGTTCAGATTCTGTGCTGATTAAGCAATTTTCATGATTATAATTTGG
CTATAAGAAAAGAATATGCTCCTCATGTAGAAACAAGTATTCTGGTTACATAGATGAGTA
TGTTTCTTATAATAAATTAAATTGGCATGTTTAAGATTATTTACATCTCATTATATGTCA
GCTATGCTGAATGCCTTTGTAATTTATCTTTGCACAATTGACTCATCGTTTCCTTACCAA
CCATAATTTTTAGTCACAGAAGCTGCAGTGAATTTGCTCAGGGCCCTTAAGCATGGTTTG
TTCCTATGGCAAAGAGCCTAACAAAAGATTGATAGTATGGACATGTTCCTGGCAGTAGGC
ATGAACATTAAGTATGCGTTTGGAGAAGTATTAGAGAATATGATAAAAATCAGTGGTTGT
AGTGAGGAGAAACTCCCTTATTTTCTAATTGTACTAGAGAATTGCTTTAGTCAGTTCAGA
AATAGCAGCATCTATATGCTTTGTCTTGGTCCTGAGGCATGGTTGCTGGAAGTTGGCAAC
AATGGGCCAACAAAGGATTTTTACACTCCTTGAAGTCGTATAACTAGAGAGATTTGCATG
AAGAATTTGTAATTGAAAAGCATGCGTGCCTACTTTTAGTAGCCTGGAAGTTGATAGTAA
TGTCATTAACCATAGGATATAAGATATTTTAACTGAGAATAATAGCTTAATATCTAAAAA
GAACTTTTGCATCACTAAAGAAGAAAAATGTCTTGCTGGGAACAAGTTTAGGAAATGAAT
GTACTTTTTTTTTATCTTCTTGGGAGAAAAGTATCC

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               1-594, gnl|bosTau2|chr24 (5987128-5987721)
               

               
               1-594, gnl|Hg17|chrX (73264295-73263365)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-594, gnl|bosTau2|chr24 (5987128-5987721)
               

               
               1-594, gnl|Hg17|chrX (73264295-73263365)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               cbl (0.114797)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cbl (0.114797)

	1-594, gnl\|bosTau2\|chr24 (5987128-5987721)
	1-594, gnl\|Hg17\|chrX (73264295-73263365)