Ss1.1-Pig4-TMW8027G02.3
|
TGAAGAGTATAGGCCATGTGTTTTATAAAATTCCCCTCAGTTTAGATTTGTTTAATGTTT
CCTTATTAATAGATCCAGATTATGCATTTGGGGCAGGAATACCACAGAGATGTTGTGTCT
TCTCCGAGCCTTATATCAAAAAGTGCATGACATTTGTTTAACACATTGTTAAGTGTTATT
TTAATTTCAGGCATTTCTTTCAGCAGATGTACTTTGAATATCATATGGTACGTTTGCAGG
AGCATATGGGTGAAAAGTATATGACTTACAGTGTGAAAGCTCGCCAGTTAAAATTTTTTG
AAGAAAATGTCAATTTTTGAGAATTTATCTAACCTGCTGCCAGAATATAACTATTTTCAA
AGGTTTTTGGCTTATAAACAAGCATAACGATGACTGAAGCCCGTTCACCATCCTTATATC
TCCTTGGGTTTTTTTTAAACTGGAAAAAAATTGGACAAAAGAGTACCATGAAGCAAGCTC
ACAAAAGAAAAAACCTTTGGCTATCTTAATTCTCTTAATGAGGAAAAATCTGTTGTAAGA
TGTTTGTTTGGTTACTGTTTACTGAGCCTTACACCACCAACTTTATATCTAGAACTATTT
TTTTAAGGTACTTTTTAGCTTGAATACAGGGCCGTAACATACTGGATTGGAAGTTTTATA
TTATAGTGATAAAAAAATAGAGATAAATAGCATATATCCAGTGATACTACTTTTTATTAT
TAATAACCTTCAGTAGGCTGATAAATTATTTTTTTATAATTCTGGGAGTAGATTTAAAAG
TATGAAATTATATCTAGTATTTCAGCAGTTGAATTTCTTTTTTTGCATATTGATAGATGT
TTAACATTTTAGTTCCATTAAATGTGAACCTCATTCAGAGTATATAAAAATTGACAGTAG
GAGATTGTTTTTACACATTGGGGTTTTTTGGCTACACTTGTGACATGAAGAAGTTCCAGG
CTAGGAATCAAACCCATTCCCTAGCAGTGACAATGCCAGATCCTTAAGATAGCTGCACCA
CAAGGGAATTCCTAGGGTTTTTAGATTTATTTTTCCATCAGTTAAAACATTTATTAAACA
CTAATTCCTTTTCTGATTTAGCAGTTTTTAAGTAAAGTCCAGATTTTTTTAGTTATGCTA
TACATTAAGATATTGGCTATCTTCCCATGTTTTAAATGTATGACTTATCTATTTTCTTAG
TTGTCAGTTAGTTGTTTAATAAGGGGTAATGCTTATCTAGAAAATAGATTTTATAAAATA
AAAAAGATCTTGGTTAGTAAGTTTTCACTTCTGTATTCCAAGGACTGTAAAAATGAGCAC
TGCTTCAGAAAGTTTCAGTTTTTATAATTAAAAATGTATTTTACCTTTTTTGAAAATTAC
ATATACACATAAAGTAATAAAATGTTCCCTTTCTAG
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
TGAAGAGTATAGGCCATGTGTTTTATAAAATTCCCCTCAGTTTAGATTTGTTTAATGTTT
CCTTATTAATAGATCCAGATTATGCATTTGGGGCAGGAATACCACAGAGATGTTGTGTCT
TCTCCGAGCCTTATATCAAAAAGTGCATGACATTTGTTTAACACATTGTTAAGTGTTATT
TTAATTTCAGGCATTTCTTTCAGCAGATGTACTTTGAATATCATATGGTACGTTTGCAGG
AGCATATGGGTGAAAAGTATATGACTTACAGTGTGAAAGCTCGCCAGTTAAAATTTTTTG
AAGAAAATGTCAATTTTTGAGAATTTATCTAACCTGCTGCCAGAATATAACTATTTTCAA
AGGTTTTTGGCTTATAAACAAGCATAACGATGACTGAAGCCCGTTCACCATCCTTATATC
TCCTTGGGTTTTTTTTAAACTGGAAAAAAATTGGACAAAAGAGTACCATGAAGCAAGCTC
ACAAAAGAAAAAACCTTTGGCTATCTTAATTCTCTTAATGAGGAAAAATCTGTTGTAAGA
TGTTTGTTTGGTTACTGTTTACTGAGCCTTACACCACCAACTTTATATCTAGAACTATTT
TTTTAAGGTACTTTTTAGCTTGAATACAGGGCCGTAACATACTGGATTGGAAGTTTTATA
TTATAGTGATAAAAAAATAGAGATAAATAGCATATATCCAGTGATACTACTTTTTATTAT
TAATAACCTTCAGTAGGCTGATAAATTATTTTTTTATAATTCTGGGAGTAGATTTAAAAG
TATGAAATTATATCTAGTATTTCAGCAGTTGAATTTCTTTTTTTGCATATTGATAGATGT
TTAACATTTTAGTTCCATTAAATGTGAACCTCATTCAGAGTATATAAAAATTGACAGTAG
GAGATTGTTTTTACACATTGGGGTTTTTTGGCTACACTTGTGACATGAAGAAGTTCCAGG
CTAGGAATCAAACCCATTCCCTAGCAGTGACAATGCCAGATCCTTAAGATAGCTGCACCA
CAAGGGAATTCCTAGGGTTTTTAGATTTATTTTTCCATCAGTTAAAACATTTATTAAACA
CTAATTCCTTTTCTGATTTAGCAGTTTTTAAGTAAAGTCCAGATTTTTTTAGTTATGCTA
TACATTAAGATATTGGCTATCTTCCCATGTTTTAAATGTATGACTTATCTATTTTCTTAG
TTGTCAGTTAGTTGTTTAATAAGGGGTAATGCTTATCTAGAAAATAGATTTTATAAAATA
AAAAAGATCTTGGTTAGTAAGTTTTCACTTCTGTATTCCAAGGACTGTAAAAATGAGCAC
TGCTTCAGAAAGTTTCAGTTTTTATAATTAAAAATGTATTTTACCTTTTTTGAAAATTAC
ATATACACATAAAGTAATAAAATGTTCCCTTTCTAG
|
|
227-910, gnl|bosTau2|chr22 (39689503-39688809) |
|
227-910, gnl|Hg17|chr3 (52720926-52720203) |
|
227-910, gnl|Mm7|chr14 (28416758-28417459) |
| |
|
376-709, gnl|bosTau2|chr15 (4262022-4262333) |
|
376-709, gnl|canFam2|chr21 (7912795-7911968) |
|
376-709, gnl|hg17|chr11 (95621594-95622479) |
|
376-709, gnl|loxAfr1|scaffold_359 (146988-146160) |
|
376-709, gnl|mm7|chr9 (13313189-13312365) |
|
376-709, gnl|panTro1|chr9 (97540071-97540957) |
|
376-709, gnl|rheMac2|chr14 (94805279-94806161) |
|
376-709, gnl|rn3|chr8 (10244340-10243445) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
227-910, gnl|bosTau2|chr22 (39689503-39688809) |
|
227-910, gnl|Hg17|chr3 (52720926-52720203) |
|
227-910, gnl|Mm7|chr14 (28416758-28417459) |
| |
|
376-709, gnl|bosTau2|chr15 (4262022-4262333) |
|
376-709, gnl|canFam2|chr21 (7912795-7911968) |
|
376-709, gnl|hg17|chr11 (95621594-95622479) |
|
376-709, gnl|loxAfr1|scaffold_359 (146988-146160) |
|
376-709, gnl|mm7|chr9 (13313189-13312365) |
|
376-709, gnl|panTro1|chr9 (97540071-97540957) |
|
376-709, gnl|rheMac2|chr14 (94805279-94806161) |
|
376-709, gnl|rn3|chr8 (10244340-10243445) |
|
cbr (0.895828) |
|
mgp (0.461361) |
|
thg (0.253582) |
|
ece (0.229305) |
|
tes (0.207814) |
|
sag (0.182715) |
|
fhi (0.169578) |
|
mga (0.160205) |
|
fco (0.157208) |
|
lin (0.145603) |
|
tra (0.123092) |
|
pgl (0.118483) |
|
spc (0.113366) |
|
cbr (0.895828) |
|
mgp (0.461361) |
|
thg (0.253582) |
|
ece (0.229305) |
|
tes (0.207814) |
|
sag (0.182715) |
|
fhi (0.169578) |
|
mga (0.160205) |
|
fco (0.157208) |
|
lin (0.145603) |
|
tra (0.123092) |
|
pgl (0.118483) |
|
spc (0.113366) |
