Non-Coding RNA Search

Ss1.1-Pig4-TMW8027I06.5

Sequence:


               
               ACTGTAATTACACAGATGTCTGCTTTAGGCCATTTTAGATGTTTGCCGGTGTGTGTGTGT
GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT
TTTGTTTTTTAAAAAAATTTGCATGTTTCATAAATTAAAAAAAATTCAAATGTTGAAACA
GCAGCATTAGGAACATTCACTGACTAGAGCAAGGCTATGGCATAATAGAGACAGTTTTTC
GAGTATGCACCTCTTTAAGGGGTCTGGAGAAAGCTATGTCCACGTACCACATGAAGGGAC
AGTGATGTCACCACACAGGGCAGAGCCAGTGCTGCAGGACTCTGGGGCTCTCCAGAGAGG
CAGGCCTTGGCAGGCCCCACCCAGGAAATCCTCTCACCCTGCTTGTGCAGGGCGCCCCCC
CATGGGCATTTCCCTGAACTGCTCCAGGAGGAAGCAAGGTACAAATTTCAACTTTTCCTC
CATTAAAGATATTTACAGTATCACGTCTTAATGAAGAACATACTCAGTAAAACGTGATGA
TTTCTACCCTTGCCTAACCTTAAAATCAGGGCAGAAAAAAATGTTCTCTCCTACGCCCAA
GCCCAAATTAGTGGAAAAAACTGGTCAGGGCCAACAGGTGGGTCAAAGCCACACCTGACT
TCAGACTTTCTCCAAACCCCACTCTCGCTGTTAATGCTCAGCCTCCTCACAATCCTTCCC
CGCGATTCCTGGTTACCTGAGAAGTAGTCTCATGGCCAAGGATGTTGCTCCGAATGTGCC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ACTGTAATTACACAGATGTCTGCTTTAGGCCATTTTAGATGTTTGCCGGTGTGTGTGTGT
GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT
TTTGTTTTTTAAAAAAATTTGCATGTTTCATAAATTAAAAAAAATTCAAATGTTGAAACA
GCAGCATTAGGAACATTCACTGACTAGAGCAAGGCTATGGCATAATAGAGACAGTTTTTC
GAGTATGCACCTCTTTAAGGGGTCTGGAGAAAGCTATGTCCACGTACCACATGAAGGGAC
AGTGATGTCACCACACAGGGCAGAGCCAGTGCTGCAGGACTCTGGGGCTCTCCAGAGAGG
CAGGCCTTGGCAGGCCCCACCCAGGAAATCCTCTCACCCTGCTTGTGCAGGGCGCCCCCC
CATGGGCATTTCCCTGAACTGCTCCAGGAGGAAGCAAGGTACAAATTTCAACTTTTCCTC
CATTAAAGATATTTACAGTATCACGTCTTAATGAAGAACATACTCAGTAAAACGTGATGA
TTTCTACCCTTGCCTAACCTTAAAATCAGGGCAGAAAAAAATGTTCTCTCCTACGCCCAA
GCCCAAATTAGTGGAAAAAACTGGTCAGGGCCAACAGGTGGGTCAAAGCCACACCTGACT
TCAGACTTTCTCCAAACCCCACTCTCGCTGTTAATGCTCAGCCTCCTCACAATCCTTCCC
CGCGATTCCTGGTTACCTGAGAAGTAGTCTCATGGCCAAGGATGTTGCTCCGAATGTGCC

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

Help | Less info


               
               104-780, gnl|bosTau2|chr22 (9215412-9214747)
               

               
               104-780, gnl|Hg17|chr3 (38501194-38500514)
               

               
               104-780, gnl|Mm7|chr9 (119114990-119114333)

Aligned organism(s): 3 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               104-780, gnl|bosTau2|chr22 (9215412-9214747)
               

               
               104-780, gnl|Hg17|chr3 (38501194-38500514)
               

               
               104-780, gnl|Mm7|chr9 (119114990-119114333)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

Help | Less info


               
               eli (0.151814)

Expressed library(ies): 1 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               eli (0.151814)

	104-780, gnl\|bosTau2\|chr22 (9215412-9214747)
	104-780, gnl\|Hg17\|chr3 (38501194-38500514)
	104-780, gnl\|Mm7\|chr9 (119114990-119114333)