Ss1.1-Pig4-TMW8027I13.3
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| TGACACACCAGCATTTAACAAACTTTATAGAGTTGTTCCAATCAGAAAAATTCACGCTCT GACCATCACATGGGCACTCCCCCCTCAACAGCAACATTACAGGTCGAAGCCACTTCATTA TATCTCTTGGCTGGTTGGACATGAAGGCAAAGGCAGCATTCTTTCCTACCTTAGAAAAAA GTGCTGGGCTCTTGCACTATTTGGTGGAAATGGTGAGACAGGATTTGAGCAAAATTCTAC CTATTCAGTGTTCAGCATTTCTATTACATTGACTGATGAAGGTTATGAACACTTCTATGA GGTTGCTCATACTGTCTTCCAGTATTTAAAAATGCTGCAGAAGCTAGGCCCAGAAAAAAG AATTTTTGAAGAAATTCAGAAAATTGAGGATAATGAATTTCATTACCAAGAACAGACAGA TCCAGTTGAGTATGTGGAAAACATGTGTGAAAACATGCAGCTGTACCCACTGCAGGACTT TCTCACTGGAGATCAGCTTCTTTTTGAATACAAGCCAGAAGTCATTGCTGAAGCCCTTAA TCAGCTAGTTCCTCAAAAGGCAAATCTTGTTCTACTCTCTGGTGCTAATGAGGGAAAATG TGACCTCAAGGAGAAATGGTTTGGCACACAGTATAGTATGGAAGATATTGAAAACTCTTG GGCTGAACTGTGGAAGAGTAATTTTGAATTAAATCCAGATCTTCATCTTCCAGCGGAAAA CAAGTACATAGCTACGGATTTCATGTTGAAGGCCTTTGATTGTCCAGAGACAGAATACCC TGTTAAAATTGTGAATACTCCACAAGGTTGCCTATGGTATAAGAAAGACAACAAGTTCAA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| TGACACACCAGCATTTAACAAACTTTATAGAGTTGTTCCAATCAGAAAAATTCACGCTCT GACCATCACATGGGCACTCCCCCCTCAACAGCAACATTACAGGTCGAAGCCACTTCATTA TATCTCTTGGCTGGTTGGACATGAAGGCAAAGGCAGCATTCTTTCCTACCTTAGAAAAAA GTGCTGGGCTCTTGCACTATTTGGTGGAAATGGTGAGACAGGATTTGAGCAAAATTCTAC CTATTCAGTGTTCAGCATTTCTATTACATTGACTGATGAAGGTTATGAACACTTCTATGA GGTTGCTCATACTGTCTTCCAGTATTTAAAAATGCTGCAGAAGCTAGGCCCAGAAAAAAG AATTTTTGAAGAAATTCAGAAAATTGAGGATAATGAATTTCATTACCAAGAACAGACAGA TCCAGTTGAGTATGTGGAAAACATGTGTGAAAACATGCAGCTGTACCCACTGCAGGACTT TCTCACTGGAGATCAGCTTCTTTTTGAATACAAGCCAGAAGTCATTGCTGAAGCCCTTAA TCAGCTAGTTCCTCAAAAGGCAAATCTTGTTCTACTCTCTGGTGCTAATGAGGGAAAATG TGACCTCAAGGAGAAATGGTTTGGCACACAGTATAGTATGGAAGATATTGAAAACTCTTG GGCTGAACTGTGGAAGAGTAATTTTGAATTAAATCCAGATCTTCATCTTCCAGCGGAAAA CAAGTACATAGCTACGGATTTCATGTTGAAGGCCTTTGATTGTCCAGAGACAGAATACCC TGTTAAAATTGTGAATACTCCACAAGGTTGCCTATGGTATAAGAAAGACAACAAGTTCAA |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 52 entry(ies) | More info |
| Aligned organism(s): 52 entry(ies) | Help | Less info |
| 181-303, gnl|bosTau2|chr3 (64008800-64008922) | |
| 181-303, gnl|canFam2|chr15 (12489291-12489144) | |
| 181-303, gnl|danRer3|chr2 (35565173-35565334) | |
| 181-303, gnl|dasNov1|scaffold_16887 (54058-54196) | |
| 181-303, gnl|echTel1|scaffold_323956 (41438-41584) | |
| 181-303, gnl|fr1|chrUn (199165027-199164894) | |
| 181-303, gnl|galGal2|chr8 (24431680-24431825) | |
| 181-303, gnl|hg17|chr1 (51992366-51992513) | |
| 181-303, gnl|Hg17|chr1 (51992506-51992384) | |
| 181-303, gnl|loxAfr1|scaffold_146900 (4186-4039) | |
| 181-303, gnl|mm7|chr4 (108416235-108416092) | |
| 181-303, gnl|Mm7|chr4 (108416097-108416219) | |
| 181-303, gnl|monDom2|scaffold_70 (1787548-1787401) | |
| 181-303, gnl|panTro1|chr1 (50216321-50216468) | |
| 181-303, gnl|rheMac2|chr1 (54634196-54634343) | |
| 181-303, gnl|rn3|chr5 (130391701-130391558) | |
| 181-303, gnl|tetNig1|chr10 (8581282-8581412) | |
| 521-647, gnl|bosTau2|chr3 (64034667-64034793) | |
| 521-647, gnl|canFam2|chr15 (12496829-12496721) | |
| 521-647, gnl|danRer3|chr2 (35563144-35563246) | |
| 521-647, gnl|dasNov1|scaffold_16482 (49400-49508) | |
| 521-647, gnl|echTel1|scaffold_260990 (4932-4825) | |
| 521-647, gnl|fr1|chrUn (199167752-199167650) | |
| 521-647, gnl|galGal2|chr8 (24428570-24428678) | |
| 521-647, gnl|hg17|chr1 (51987967-51988075) | |
| 521-647, gnl|Hg17|chr1 (51988097-51987971) | |
| 521-647, gnl|loxAfr1|scaffold_29927 (30030-29922) | |
| 521-647, gnl|mm7|chr4 (108421119-108421011) | |
| 521-647, gnl|Mm7|chr4 (108420987-108421113) | |
| 521-647, gnl|monDom2|scaffold_70 (1800588-1800484) | |
| 521-647, gnl|panTro1|chr1 (50211926-50212034) | |
| 521-647, gnl|rheMac2|chr1 (54629681-54629789) | |
| 521-647, gnl|rn3|chr5 (130397325-130397217) | |
| 521-647, gnl|tetNig1|chr10 (8578549-8578651) | |
| 521-647, gnl|xenTro1|scaffold_197 (19546-19649) | |
| 729-840, gnl|bosTau2|chr3 (64037091-64037202) | |
| 729-840, gnl|canFam2|chr15 (12499660-12499505) | |
| 729-840, gnl|danRer3|chr2 (35560623-35560780) | |
| 729-840, gnl|dasNov1|scaffold_16482 (47528-47682) | |
| 729-840, gnl|fr1|chrUn (199168995-199168842) | |
| 729-840, gnl|galGal2|chr8 (24427242-24427375) | |
| 729-840, gnl|hg17|chr1 (51984451-51984632) | |
| 729-840, gnl|Hg17|chr1 (51984609-51984498) | |
| 729-840, gnl|mm7|chr4 (108424174-108424011) | |
| 729-840, gnl|Mm7|chr4 (108424033-108424144) | |
| 729-840, gnl|monDom2|scaffold_70 (1801902-1801752) | |
| 729-840, gnl|oryCun1|scaffold_211049 (54407-54252) | |
| 729-840, gnl|panTro1|chr1 (50208411-50208592) | |
| 729-840, gnl|rheMac2|chr1 (54626186-54626367) | |
| 729-840, gnl|rn3|chr5 (130399745-130399584) | |
| 729-840, gnl|tetNig1|chr10 (8577278-8577419) | |
| 729-840, gnl|xenTro1|scaffold_197 (18357-18545) |
| Aligned organism(s): 52 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 181-303, gnl|bosTau2|chr3 (64008800-64008922) | |
| 181-303, gnl|canFam2|chr15 (12489291-12489144) | |
| 181-303, gnl|danRer3|chr2 (35565173-35565334) | |
| 181-303, gnl|dasNov1|scaffold_16887 (54058-54196) | |
| 181-303, gnl|echTel1|scaffold_323956 (41438-41584) | |
| 181-303, gnl|fr1|chrUn (199165027-199164894) | |
| 181-303, gnl|galGal2|chr8 (24431680-24431825) | |
| 181-303, gnl|hg17|chr1 (51992366-51992513) | |
| 181-303, gnl|Hg17|chr1 (51992506-51992384) | |
| 181-303, gnl|loxAfr1|scaffold_146900 (4186-4039) | |
| 181-303, gnl|mm7|chr4 (108416235-108416092) | |
| 181-303, gnl|Mm7|chr4 (108416097-108416219) | |
| 181-303, gnl|monDom2|scaffold_70 (1787548-1787401) | |
| 181-303, gnl|panTro1|chr1 (50216321-50216468) | |
| 181-303, gnl|rheMac2|chr1 (54634196-54634343) | |
| 181-303, gnl|rn3|chr5 (130391701-130391558) | |
| 181-303, gnl|tetNig1|chr10 (8581282-8581412) | |
| 521-647, gnl|bosTau2|chr3 (64034667-64034793) | |
| 521-647, gnl|canFam2|chr15 (12496829-12496721) | |
| 521-647, gnl|danRer3|chr2 (35563144-35563246) | |
| 521-647, gnl|dasNov1|scaffold_16482 (49400-49508) | |
| 521-647, gnl|echTel1|scaffold_260990 (4932-4825) | |
| 521-647, gnl|fr1|chrUn (199167752-199167650) | |
| 521-647, gnl|galGal2|chr8 (24428570-24428678) | |
| 521-647, gnl|hg17|chr1 (51987967-51988075) | |
| 521-647, gnl|Hg17|chr1 (51988097-51987971) | |
| 521-647, gnl|loxAfr1|scaffold_29927 (30030-29922) | |
| 521-647, gnl|mm7|chr4 (108421119-108421011) | |
| 521-647, gnl|Mm7|chr4 (108420987-108421113) | |
| 521-647, gnl|monDom2|scaffold_70 (1800588-1800484) | |
| 521-647, gnl|panTro1|chr1 (50211926-50212034) | |
| 521-647, gnl|rheMac2|chr1 (54629681-54629789) | |
| 521-647, gnl|rn3|chr5 (130397325-130397217) | |
| 521-647, gnl|tetNig1|chr10 (8578549-8578651) | |
| 521-647, gnl|xenTro1|scaffold_197 (19546-19649) | |
| 729-840, gnl|bosTau2|chr3 (64037091-64037202) | |
| 729-840, gnl|canFam2|chr15 (12499660-12499505) | |
| 729-840, gnl|danRer3|chr2 (35560623-35560780) | |
| 729-840, gnl|dasNov1|scaffold_16482 (47528-47682) | |
| 729-840, gnl|fr1|chrUn (199168995-199168842) | |
| 729-840, gnl|galGal2|chr8 (24427242-24427375) | |
| 729-840, gnl|hg17|chr1 (51984451-51984632) | |
| 729-840, gnl|Hg17|chr1 (51984609-51984498) | |
| 729-840, gnl|mm7|chr4 (108424174-108424011) | |
| 729-840, gnl|Mm7|chr4 (108424033-108424144) | |
| 729-840, gnl|monDom2|scaffold_70 (1801902-1801752) | |
| 729-840, gnl|oryCun1|scaffold_211049 (54407-54252) | |
| 729-840, gnl|panTro1|chr1 (50208411-50208592) | |
| 729-840, gnl|rheMac2|chr1 (54626186-54626367) | |
| 729-840, gnl|rn3|chr5 (130399745-130399584) | |
| 729-840, gnl|tetNig1|chr10 (8577278-8577419) | |
| 729-840, gnl|xenTro1|scaffold_197 (18357-18545) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| ton (0.1755) |