Ss1.1-Pig4-TMW8028F13.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GGTTACTGATGTCAAGGAGAAGCTGAAACAGGCCAAGAAGTTCTGGTCCTCTCTTCCCAG CAACGTCTGCAATGACGAGAGGATGGCTGCAGGCAATGGCAATGAGGACGACTGCTGGAA TGGAAAAGGCAAAAGCAGGTACCTGTTTGCAGTGACAGGAAATGGATTAGCCAACCAGGG CAACAATCCAGAGGTCCAGGTCGACACCAGCAAACCAGACATACTGATCCTTCGTCAAAT CATGGCTCTTCGAGTTATGACCAGCAAAATGAAGAATGCTTACAATGGGAACGACGTGGA CTTCTTTGATATCAGTGATGAAAGCAGTGGAGAAGGAAGTGGGAGTGGCTGTGAGTATCA GCAGTGCCCTTCGGAGTTTGAGTATAATGCAACTGAGCACTCTGGGAAGAATGCCCATGA TAAAGCCAGCAGCGCTGGGGCCCCTGCCAGGGCCCAGCCCTACCTCCTCACTGCCTTTGG CATCTTGTCCCTGGTCATGCCGAGAGAGTGGAGATAATTCGCAACCTTAGAGAAAAAGTG TTCATCATCAAAAAGCTAACAAGGCGCCGGTTATCACTTTTATACCATCCTAGTGACTTT GCTTTTTAAATGAATGGACAACGATGTACAGTTTTTACTACATGGCCA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GGTTACTGATGTCAAGGAGAAGCTGAAACAGGCCAAGAAGTTCTGGTCCTCTCTTCCCAG CAACGTCTGCAATGACGAGAGGATGGCTGCAGGCAATGGCAATGAGGACGACTGCTGGAA TGGAAAAGGCAAAAGCAGGTACCTGTTTGCAGTGACAGGAAATGGATTAGCCAACCAGGG CAACAATCCAGAGGTCCAGGTCGACACCAGCAAACCAGACATACTGATCCTTCGTCAAAT CATGGCTCTTCGAGTTATGACCAGCAAAATGAAGAATGCTTACAATGGGAACGACGTGGA CTTCTTTGATATCAGTGATGAAAGCAGTGGAGAAGGAAGTGGGAGTGGCTGTGAGTATCA GCAGTGCCCTTCGGAGTTTGAGTATAATGCAACTGAGCACTCTGGGAAGAATGCCCATGA TAAAGCCAGCAGCGCTGGGGCCCCTGCCAGGGCCCAGCCCTACCTCCTCACTGCCTTTGG CATCTTGTCCCTGGTCATGCCGAGAGAGTGGAGATAATTCGCAACCTTAGAGAAAAAGTG TTCATCATCAAAAAGCTAACAAGGCGCCGGTTATCACTTTTATACCATCCTAGTGACTTT GCTTTTTAAATGAATGGACAACGATGTACAGTTTTTACTACATGGCCA |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 25 entry(ies) | More info |
| Aligned organism(s): 25 entry(ies) | Help | Less info |
| 135-325, gnl|bosTau2|chr19 (31653279-31653090) | |
| 135-325, gnl|canFam2|chr22 (48177476-48177678) | |
| 135-325, gnl|danRer3|chrNA (179847610-179847812) | |
| 135-325, gnl|dasNov1|scaffold_21627 (3976-3774) | |
| 135-325, gnl|echTel1|scaffold_302176 (41963-42164) | |
| 135-325, gnl|fr1|chrUn (95696358-95696152) | |
| 135-325, gnl|galGal2|chr1 (139139241-139139040) | |
| 135-325, gnl|hg17|chr13 (93848706-93848908) | |
| 135-325, gnl|Hg17|chr13 (93848717-93848906) | |
| 135-325, gnl|loxAfr1|scaffold_517 (179629-179802) | |
| 135-325, gnl|mm7|chr14 (112366654-112366856) | |
| 135-325, gnl|Mm7|chr14 (112366665-112366854) | |
| 135-325, gnl|monDom2|scaffold_11 (59058030-59057826) | |
| 135-325, gnl|oryCun1|scaffold_209347 (30835-30632) | |
| 135-325, gnl|panTro1|chr14 (76877977-76878179) | |
| 135-325, gnl|rheMac2|chr17 (74802087-74802289) | |
| 135-325, gnl|rn3|chr15 (102752965-102753167) | |
| 135-325, gnl|tetNig1|chr2 (10623892-10624091) | |
| 135-325, gnl|xenTro1|scaffold_486 (589066-589263) | |
| 367-648, gnl|bosTau2|chr2 (47361220-47360945) | |
| 367-648, gnl|Hg17|chrX (132162564-132162288) | |
| 367-648, gnl|Mm7|chrX (47145925-47145634) | |
| 469-647, gnl|bosTau2|chr26 (7298082-7298272) | |
| 469-647, gnl|Hg17|chrX (132162462-132162289) | |
| 469-647, gnl|Mm7|chrX (47145818-47145635) |
| Aligned organism(s): 25 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 135-325, gnl|bosTau2|chr19 (31653279-31653090) | |
| 135-325, gnl|canFam2|chr22 (48177476-48177678) | |
| 135-325, gnl|danRer3|chrNA (179847610-179847812) | |
| 135-325, gnl|dasNov1|scaffold_21627 (3976-3774) | |
| 135-325, gnl|echTel1|scaffold_302176 (41963-42164) | |
| 135-325, gnl|fr1|chrUn (95696358-95696152) | |
| 135-325, gnl|galGal2|chr1 (139139241-139139040) | |
| 135-325, gnl|hg17|chr13 (93848706-93848908) | |
| 135-325, gnl|Hg17|chr13 (93848717-93848906) | |
| 135-325, gnl|loxAfr1|scaffold_517 (179629-179802) | |
| 135-325, gnl|mm7|chr14 (112366654-112366856) | |
| 135-325, gnl|Mm7|chr14 (112366665-112366854) | |
| 135-325, gnl|monDom2|scaffold_11 (59058030-59057826) | |
| 135-325, gnl|oryCun1|scaffold_209347 (30835-30632) | |
| 135-325, gnl|panTro1|chr14 (76877977-76878179) | |
| 135-325, gnl|rheMac2|chr17 (74802087-74802289) | |
| 135-325, gnl|rn3|chr15 (102752965-102753167) | |
| 135-325, gnl|tetNig1|chr2 (10623892-10624091) | |
| 135-325, gnl|xenTro1|scaffold_486 (589066-589263) | |
| 367-648, gnl|bosTau2|chr2 (47361220-47360945) | |
| 367-648, gnl|Hg17|chrX (132162564-132162288) | |
| 367-648, gnl|Mm7|chrX (47145925-47145634) | |
| 469-647, gnl|bosTau2|chr26 (7298082-7298272) | |
| 469-647, gnl|Hg17|chrX (132162462-132162289) | |
| 469-647, gnl|Mm7|chrX (47145818-47145635) |
| Expressed library(ies): 3 entry(ies) | More info |
| Expressed library(ies): 3 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| hea (0.204499) | |
| nje (0.16592) | |
| pla (0.133672) |