Non-Coding RNA Search

Ss1.1-Pig4-TMW8028G08.3

Sequence:


               
               AAACTGGTTAGTTAACGAATGTGTGTGTAACATTGGTGGGAAAGTGGATGTAAAATAGGC
ATGGACGCATGATTTTAGGTCAAGGTCATTCATTCATTCATTCTTACAATACATTTTTGG
TTGGAGAAGAGGAGAATGGCTAATTAGGTATGATCTTTACAAGAGCTCTTTTAAATTCTG
TTTTGGGGACCACTTGATCTAGAACGTCTTGTACATTCCTGAACAATTACTCAGTACCTT
GACTTAGCAAAACCAGAAAAGAAAGGAAGGGAAAAGGACCTCAACAATGCAGATGCTGAC
TCTGTTGCCTGAGAATTTCTGAATCTGAAAGTCCTGCTAAGCATCATCTCACTGATTGTG
CATCTTTCTTCTCTTTGTTTATAATATCCCATCTCTAAATGTGTGGAAGATGTAGAGGTG
TATTTTCCAGATCTCTGAGATGGGAAGGACCAATGTTAGTGTAATTCGAACCCACGTTTC
AGCGGCTTGGGGGCTGATGGGTGGACACTGCCTGCAAACATTTACCTGCACCATCTGTTT
TGCAAACACAATGATGAGCATCTTGCCGAACTTTGAGGGCCTCCATGTGGAGGTGGCATT
CCCAGTGTTTATTTCTGGACCTCTGAGTTACTTTAGCACAGTTATTGTTCGTAGTTTATA
AAGCCATATCTAAACTTGTACACTTGATTGTAAGATAGATTTGAATTGTGCACTATGTTG
ATTACTGTATATAAATGTGGAAATTCTGTATATTTGGTCTTAATGCTGTATGTATTTGAT
GTGTAAATGATAACTAATGGATAT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AAACTGGTTAGTTAACGAATGTGTGTGTAACATTGGTGGGAAAGTGGATGTAAAATAGGC
ATGGACGCATGATTTTAGGTCAAGGTCATTCATTCATTCATTCTTACAATACATTTTTGG
TTGGAGAAGAGGAGAATGGCTAATTAGGTATGATCTTTACAAGAGCTCTTTTAAATTCTG
TTTTGGGGACCACTTGATCTAGAACGTCTTGTACATTCCTGAACAATTACTCAGTACCTT
GACTTAGCAAAACCAGAAAAGAAAGGAAGGGAAAAGGACCTCAACAATGCAGATGCTGAC
TCTGTTGCCTGAGAATTTCTGAATCTGAAAGTCCTGCTAAGCATCATCTCACTGATTGTG
CATCTTTCTTCTCTTTGTTTATAATATCCCATCTCTAAATGTGTGGAAGATGTAGAGGTG
TATTTTCCAGATCTCTGAGATGGGAAGGACCAATGTTAGTGTAATTCGAACCCACGTTTC
AGCGGCTTGGGGGCTGATGGGTGGACACTGCCTGCAAACATTTACCTGCACCATCTGTTT
TGCAAACACAATGATGAGCATCTTGCCGAACTTTGAGGGCCTCCATGTGGAGGTGGCATT
CCCAGTGTTTATTTCTGGACCTCTGAGTTACTTTAGCACAGTTATTGTTCGTAGTTTATA
AAGCCATATCTAAACTTGTACACTTGATTGTAAGATAGATTTGAATTGTGCACTATGTTG
ATTACTGTATATAAATGTGGAAATTCTGTATATTTGGTCTTAATGCTGTATGTATTTGAT
GTGTAAATGATAACTAATGGATAT

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

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               7-804, gnl|bosTau2|chr9 (33548023-33547217)
               

               
               7-804, gnl|Hg17|chr6 (99828326-99827520)
               

               
               7-804, gnl|Mm7|chr4 (22004322-22005100)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               7-804, gnl|bosTau2|chr9 (33548023-33547217)
               

               
               7-804, gnl|Hg17|chr6 (99828326-99827520)
               

               
               7-804, gnl|Mm7|chr4 (22004322-22005100)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               isp (0.150376)
               

               
               spc (0.113366)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               isp (0.150376)
               

               
               spc (0.113366)

	7-804, gnl\|bosTau2\|chr9 (33548023-33547217)
	7-804, gnl\|Hg17\|chr6 (99828326-99827520)
	7-804, gnl\|Mm7\|chr4 (22004322-22005100)