Non-Coding RNA Search

Ss1.1-Pig4-TMW8028J01.5

Sequence:


               
               TGTCACTCTGATCCTCAGTGGCGTCTTCTTCATCCACGAGAGTTCACAGCTGCAGCACGG
GGCGGCCCTGTGTGAGTGGATGTTTGTAATCGACATCCTCATCTTCTACGGCACCTTCAG
CTACGAGTTTGGGGTGGTCTCCTCAGAGACACTGGTGGCTGCCCTGCAGCCTGCCCCCGG
CCGGGCCTGCAAGTCCTCTGGGAGCAGCAGCGCATCCACCCACCTCAACTGTGCCCCTGA
GAGCGTCGCCATGATCTGAGGTCTGGGGAGGGGTGGCTGGCCCCACCTCCACAGCTCCCT
TCCCCGTATCGCCTTTGCATTTATTTTGTACCAAAAAACAATTCTGAGAAAGTATTCTGT
TGGGGCGGAGGCTTCCTCATGCCTGGAGGAGCGGCCGTCCCACACCCACCTGTGCCATAG
AGGAGCGGGCGCTGGCAGCCTCCTGGGCTGTGCATCGCCAGCCCCCACACTGCAGTGTTA
TTTTATTGTTTAAAGGTCACATATCCTCATTCACCCAGCTAGCCCTTCAGGTGCCTTCTA
CTCCCCAGTGCCAAGGCCAGACCACTGGGGTTTCCTGCTGCAGGAATTGGGGGCTGGGAA
CAGCAAGAGGGATAGAAGTCTTGGGGGCAGGGGTGAGCACTCCTTAGTCTTTGTGAAGGC
CCACTTTGGGGCCCAAGGAGCTGCACTGGGATTCTTCACTCTGCCCCCTTTCTTTAGGGC
AAATAACACAGCAGAACCATGTGGGTTATTTTAGTA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TGTCACTCTGATCCTCAGTGGCGTCTTCTTCATCCACGAGAGTTCACAGCTGCAGCACGG
GGCGGCCCTGTGTGAGTGGATGTTTGTAATCGACATCCTCATCTTCTACGGCACCTTCAG
CTACGAGTTTGGGGTGGTCTCCTCAGAGACACTGGTGGCTGCCCTGCAGCCTGCCCCCGG
CCGGGCCTGCAAGTCCTCTGGGAGCAGCAGCGCATCCACCCACCTCAACTGTGCCCCTGA
GAGCGTCGCCATGATCTGAGGTCTGGGGAGGGGTGGCTGGCCCCACCTCCACAGCTCCCT
TCCCCGTATCGCCTTTGCATTTATTTTGTACCAAAAAACAATTCTGAGAAAGTATTCTGT
TGGGGCGGAGGCTTCCTCATGCCTGGAGGAGCGGCCGTCCCACACCCACCTGTGCCATAG
AGGAGCGGGCGCTGGCAGCCTCCTGGGCTGTGCATCGCCAGCCCCCACACTGCAGTGTTA
TTTTATTGTTTAAAGGTCACATATCCTCATTCACCCAGCTAGCCCTTCAGGTGCCTTCTA
CTCCCCAGTGCCAAGGCCAGACCACTGGGGTTTCCTGCTGCAGGAATTGGGGGCTGGGAA
CAGCAAGAGGGATAGAAGTCTTGGGGGCAGGGGTGAGCACTCCTTAGTCTTTGTGAAGGC
CCACTTTGGGGCCCAAGGAGCTGCACTGGGATTCTTCACTCTGCCCCCTTTCTTTAGGGC
AAATAACACAGCAGAACCATGTGGGTTATTTTAGTA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               18-756, gnl|bosTau2|chr11 (36401695-36402423)
               

               
               18-756, gnl|Hg17|chr2 (85738098-85737361)
               

               
               18-756, gnl|Mm7|chr6 (72376937-72377654)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               18-756, gnl|bosTau2|chr11 (36401695-36402423)
               

               
               18-756, gnl|Hg17|chr2 (85738098-85737361)
               

               
               18-756, gnl|Mm7|chr6 (72376937-72377654)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               fhi (0.169578)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               fhi (0.169578)

	18-756, gnl\|bosTau2\|chr11 (36401695-36402423)
	18-756, gnl\|Hg17\|chr2 (85738098-85737361)
	18-756, gnl\|Mm7\|chr6 (72376937-72377654)