Non-Coding RNA Search

Ss1.1-Pig4-TMW8028K22.3

Sequence:


               
               TCAGAGCTGCAGCTACCAGCTTACACCACAGCCACAGCAATGTCAGATCCGAGCCACATC
TGTGACCTACACCGCTGCTCACGCAACGCCGGACCTTAACCCACTGAGCCAGGTCGGGGA
TCGAACCTGCATTCCCATGAGTGCTAGTCAGAGCTACGATGGGAACTCCTGGGAAGATGC
TTGCTGCAGCTGGTGCTCCTTCTGCGGAAGAGAGGATTCTCGTTTGTTTAAACACTGGCT
CGAGTTGAGTGTGGGCTTCTGGAGCATCCTCACATCAGGCACATGCCTTTTCCGTGTTCT
CCAGGGAGACTGAAGAGGGTCCTTCAGTGCTGCCCTGAAATTTTCACCATGCGTCAGCGG
GACCTGGAGAGCATCGTCGGGGTTCTCAGGGAGAGGTGCCTTTTCACGGTAAAGCAAGTA
ACGGAGGTTTTGCACAGATGCCCCCATGTGCTCCGGGAGGACCCTGCTGAGCTGGAATAC
AAATTCCAGGTGAGCACGACTGCCGGGGCCTCGAGCGTGGGAAGGGGAGTCGCTCAGCGT
GGGCAGGTCCGGTGTGGATGGGAAGGCTGGGGCGCGAGGGGCAAGCGGGTGAGGCAAAGG
CTAGGCCCCCTTTGCTCTTGCTGACCGGGGGGACTCAGTGTGGTTCTCCCACTTCTTCAG
TACAGATGAAACCTCCATATGCCGTGGGAGCGGCCCAAGAAATGGCAAAAAAAAGACAAA
AAAAAAAAAAAGCATATCAGAGAAAGTAAAAGAAAAAAATCCTGTTTA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TCAGAGCTGCAGCTACCAGCTTACACCACAGCCACAGCAATGTCAGATCCGAGCCACATC
TGTGACCTACACCGCTGCTCACGCAACGCCGGACCTTAACCCACTGAGCCAGGTCGGGGA
TCGAACCTGCATTCCCATGAGTGCTAGTCAGAGCTACGATGGGAACTCCTGGGAAGATGC
TTGCTGCAGCTGGTGCTCCTTCTGCGGAAGAGAGGATTCTCGTTTGTTTAAACACTGGCT
CGAGTTGAGTGTGGGCTTCTGGAGCATCCTCACATCAGGCACATGCCTTTTCCGTGTTCT
CCAGGGAGACTGAAGAGGGTCCTTCAGTGCTGCCCTGAAATTTTCACCATGCGTCAGCGG
GACCTGGAGAGCATCGTCGGGGTTCTCAGGGAGAGGTGCCTTTTCACGGTAAAGCAAGTA
ACGGAGGTTTTGCACAGATGCCCCCATGTGCTCCGGGAGGACCCTGCTGAGCTGGAATAC
AAATTCCAGGTGAGCACGACTGCCGGGGCCTCGAGCGTGGGAAGGGGAGTCGCTCAGCGT
GGGCAGGTCCGGTGTGGATGGGAAGGCTGGGGCGCGAGGGGCAAGCGGGTGAGGCAAAGG
CTAGGCCCCCTTTGCTCTTGCTGACCGGGGGGACTCAGTGTGGTTCTCCCACTTCTTCAG
TACAGATGAAACCTCCATATGCCGTGGGAGCGGCCCAAGAAATGGCAAAAAAAAGACAAA
AAAAAAAAAAAGCATATCAGAGAAAGTAAAAGAAAAAAATCCTGTTTA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               166-502, gnl|bosTau2|chr3 (82878645-82878996)
               

               
               166-502, gnl|Hg17|chr2 (241756987-241756635)
               

               
               166-502, gnl|Mm7|chr1 (93210969-93210514)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               166-502, gnl|bosTau2|chr3 (82878645-82878996)
               

               
               166-502, gnl|Hg17|chr2 (241756987-241756635)
               

               
               166-502, gnl|Mm7|chr1 (93210969-93210514)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               fcc (0.197785)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               fcc (0.197785)

	166-502, gnl\|bosTau2\|chr3 (82878645-82878996)
	166-502, gnl\|Hg17\|chr2 (241756987-241756635)
	166-502, gnl\|Mm7\|chr1 (93210969-93210514)