Ss1.1-Pig4-TMW8028M04.3
|
TCGAAGTGCCTCTAGGGAAATGTATGAACGAGAAAACAGGAGCCTCCGAGAAGCAAGGGA
TAATGCTTTGGCTGAAAAGGACCGAGCAGTGATGGCTGAAAAGGATGCTCTAGAAAAACA
TGATCAGCTCTTAGACAGGTACAGAGAACTACAACTTAGTACAGAAAGCAAAGTAACGGA
ATTTCTCCATCAAAGTAAATTAAAATCTTTTGAAAGTGAGCGTGCTCAGCTTATACAAGA
GGAAACTGCAAGGAATCTCACACAGTGTCAGTTGGAATGTGAAAAATATCAGAAAAAATT
GGAGGTTTTAACTAAAGAATTTTATGGTCTCCAGTCCTCTTCTGAAAAACGCATTACTGA
ACTTCAAGCACAGAACTCTGAACATCAGGCAAGGCTAGACATTTATGAGAAACTGGAAAA
AGAGCTTGATGAAATAATAATGCAAACTGCAGAAATTGAAAATGAAGATGAGGCCGAAAG
GATTCTTTTTTCCTATGGCTATGGTGCTAATGTTCCCACAACAGCTAAAAGACGACTAAA
GCAAAGTGTCCACTTGGCAAGAAGAGTGCTTCAGTTAGAAAAACAAAACTCATTGGTTTT
AAGAGACCTGGAACATCAAAAGAACCAAGTGACACAGCTTTCACAAGAGCTTGACAGGGC
CAATTCTCTGTTAAACCAGACTCAACAACCTTACAGGTACCTCATTGAATCAGTGCGTCA
GAGAGACTCTAAGATTGATTCCCTGAAGGAGTGTATTACGCAACTTGAGAAAGATGTCAG
CAATTTAAATAAAGAGAAGTCCGCTTTACAACAGATGAAGAATCAGATGGCCTTAGATTT
GGAACAACTTCTAAATCATCGTGAGGAATTGGCAGCAATGAAACAGATTCTCACAAATAT
GCGTAGTAAGCGGAAGGAGAACAAGTTACTTTTTACTAAAATGGAATCCAAAAATGTGAC
AGAAAATCAGAAATCAAAGACTTCGAATGTGCCTAGAGAACATGAAGACAATATATTTAT
ACCCAAACCAACAGTCTTTACCAAAAAAGAAGCTCCTGAGTGGTCTAAGACACAAAAGAT
GAAGACCTAGTGTTTTGGACAGATTTGCTGTATCTTTATTCATTCCTGAAGTTCTTTTTC
TGATGAACAGAAAGTTTATCTCAATCATGTCTTTGGCAATTTTTGAATAGCTAACTTAAA
ATTTTATTTTACCTGAATGTTAAATTGACAAATTTTATCATCATAATAAAAATATATTTG
GTTTTATCTATTTTGTTATAAAATAAATACTGTATACTCTGTGATTTACATTTTGGAGCT
TTCATAATTCTCCAAGGCATTTTAAATGTGTGGCTTATATTTTGGTTAGTTGTTATTATT
GGTATTTCTCTAACTGTATAAATTTTGAGTTTAAATGTCATAACACAAATACCAAGACAC
CTTTCAGTTTTTAAATTAATAATCATTTGTGAAGTCTACGAGAAAGCACTTCCAATGCCC
AGTAATGGTGGTCAGATATGATGTAAATGGATATAAGTTGCTGATTCTTTCTTCAGGCTC
TGTTTTTTCTTATATTTCATATTTTAATTAATCAATAAAATCTGGTAC
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
TCGAAGTGCCTCTAGGGAAATGTATGAACGAGAAAACAGGAGCCTCCGAGAAGCAAGGGA
TAATGCTTTGGCTGAAAAGGACCGAGCAGTGATGGCTGAAAAGGATGCTCTAGAAAAACA
TGATCAGCTCTTAGACAGGTACAGAGAACTACAACTTAGTACAGAAAGCAAAGTAACGGA
ATTTCTCCATCAAAGTAAATTAAAATCTTTTGAAAGTGAGCGTGCTCAGCTTATACAAGA
GGAAACTGCAAGGAATCTCACACAGTGTCAGTTGGAATGTGAAAAATATCAGAAAAAATT
GGAGGTTTTAACTAAAGAATTTTATGGTCTCCAGTCCTCTTCTGAAAAACGCATTACTGA
ACTTCAAGCACAGAACTCTGAACATCAGGCAAGGCTAGACATTTATGAGAAACTGGAAAA
AGAGCTTGATGAAATAATAATGCAAACTGCAGAAATTGAAAATGAAGATGAGGCCGAAAG
GATTCTTTTTTCCTATGGCTATGGTGCTAATGTTCCCACAACAGCTAAAAGACGACTAAA
GCAAAGTGTCCACTTGGCAAGAAGAGTGCTTCAGTTAGAAAAACAAAACTCATTGGTTTT
AAGAGACCTGGAACATCAAAAGAACCAAGTGACACAGCTTTCACAAGAGCTTGACAGGGC
CAATTCTCTGTTAAACCAGACTCAACAACCTTACAGGTACCTCATTGAATCAGTGCGTCA
GAGAGACTCTAAGATTGATTCCCTGAAGGAGTGTATTACGCAACTTGAGAAAGATGTCAG
CAATTTAAATAAAGAGAAGTCCGCTTTACAACAGATGAAGAATCAGATGGCCTTAGATTT
GGAACAACTTCTAAATCATCGTGAGGAATTGGCAGCAATGAAACAGATTCTCACAAATAT
GCGTAGTAAGCGGAAGGAGAACAAGTTACTTTTTACTAAAATGGAATCCAAAAATGTGAC
AGAAAATCAGAAATCAAAGACTTCGAATGTGCCTAGAGAACATGAAGACAATATATTTAT
ACCCAAACCAACAGTCTTTACCAAAAAAGAAGCTCCTGAGTGGTCTAAGACACAAAAGAT
GAAGACCTAGTGTTTTGGACAGATTTGCTGTATCTTTATTCATTCCTGAAGTTCTTTTTC
TGATGAACAGAAAGTTTATCTCAATCATGTCTTTGGCAATTTTTGAATAGCTAACTTAAA
ATTTTATTTTACCTGAATGTTAAATTGACAAATTTTATCATCATAATAAAAATATATTTG
GTTTTATCTATTTTGTTATAAAATAAATACTGTATACTCTGTGATTTACATTTTGGAGCT
TTCATAATTCTCCAAGGCATTTTAAATGTGTGGCTTATATTTTGGTTAGTTGTTATTATT
GGTATTTCTCTAACTGTATAAATTTTGAGTTTAAATGTCATAACACAAATACCAAGACAC
CTTTCAGTTTTTAAATTAATAATCATTTGTGAAGTCTACGAGAAAGCACTTCCAATGCCC
AGTAATGGTGGTCAGATATGATGTAAATGGATATAAGTTGCTGATTCTTTCTTCAGGCTC
TGTTTTTTCTTATATTTCATATTTTAATTAATCAATAAAATCTGGTAC
|
|
gi|34420834|gb|AAQ67659.1| |
Protein identifier
|
gi|34420834|gb|AAQ67659.1| |
|
136-306, gnl|bosTau2|chr20 (15303178-15303348) |
|
136-306, gnl|canFam2|chr22 (29995608-29995816) |
|
136-306, gnl|danRer3|chr11 (26858219-26858403) |
|
136-306, gnl|dasNov1|scaffold_8150 (19284-19492) |
|
136-306, gnl|fr1|chrUn (135886170-135885986) |
|
136-306, gnl|galGal2|chr1 (152833443-152833258) |
|
136-306, gnl|hg17|chr13 (72365903-72366111) |
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136-306, gnl|Hg17|chr13 (72365920-72366090) |
|
136-306, gnl|loxAfr1|scaffold_55735 (13571-13779) |
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136-306, gnl|mm7|chr14 (93579792-93580000) |
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136-306, gnl|Mm7|chr14 (93579809-93579979) |
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136-306, gnl|monDom2|scaffold_8 (9184674-9184875) |
|
136-306, gnl|panTro1|chr14 (54913764-54913972) |
|
136-306, gnl|rheMac2|chr17 (53346973-53347181) |
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136-306, gnl|rn3|chr15 (82998640-82998848) |
|
136-306, gnl|xenTro1|scaffold_107 (788333-788146) |
| |
|
1122-1602, gnl|bosTau2|chr20 (15422768-15423266) |
|
1122-1602, gnl|Hg17|chr13 (72488094-72488563) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
136-306, gnl|bosTau2|chr20 (15303178-15303348) |
|
136-306, gnl|canFam2|chr22 (29995608-29995816) |
|
136-306, gnl|danRer3|chr11 (26858219-26858403) |
|
136-306, gnl|dasNov1|scaffold_8150 (19284-19492) |
|
136-306, gnl|fr1|chrUn (135886170-135885986) |
|
136-306, gnl|galGal2|chr1 (152833443-152833258) |
|
136-306, gnl|hg17|chr13 (72365903-72366111) |
|
136-306, gnl|Hg17|chr13 (72365920-72366090) |
|
136-306, gnl|loxAfr1|scaffold_55735 (13571-13779) |
|
136-306, gnl|mm7|chr14 (93579792-93580000) |
|
136-306, gnl|Mm7|chr14 (93579809-93579979) |
|
136-306, gnl|monDom2|scaffold_8 (9184674-9184875) |
|
136-306, gnl|panTro1|chr14 (54913764-54913972) |
|
136-306, gnl|rheMac2|chr17 (53346973-53347181) |
|
136-306, gnl|rn3|chr15 (82998640-82998848) |
|
136-306, gnl|xenTro1|scaffold_107 (788333-788146) |
| |
|
1122-1602, gnl|bosTau2|chr20 (15422768-15423266) |
|
1122-1602, gnl|Hg17|chr13 (72488094-72488563) |
|
ova (0.258264) |
|
nms (0.213858) |
|
eye (0.170503) |
|
ssp (0.13552) |
|
cty (0.10408) |
|
ova (0.258264) |
|
nms (0.213858) |
|
eye (0.170503) |
|
ssp (0.13552) |
|
cty (0.10408) |
