Non-Coding RNA Search

Ss1.1-Pig4-TMW8029C05.5

Sequence:


               
               GAACTCCTTAAGTAACATTTTAAATTTGGGACTGGCAAAATGGATTCTTTAGTGAGATCT
CCAGTTTCCCTTAAGGAAAAAAATTGTATTTCTTCTACCCAGAGGAAGTAATTAGTATGA
CATGTTACCCATTAATGTGAATTTTTGAAGTAGGTGGGTTATTACCATTTTTTTTAATAG
TAAGCTATAGAATTGGCTGTACCTTGTGTGGAGTTTTTTGTTTGTTTGTTTGTTTTTTGT
TTGTTTGTTTTT------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------CTTGTGTATAGCTTTGAGCTTGAGTGGGGGAGTAAGGTCTGCTTCTCC
ATCCCCATGTTAAGTGGGAGGTAGGGCATTAAATTGTTTCTTTTATAAACTACAAGCTTC
CTGAAAGCAGGGTTTGGGGCTCTCTGTCTAGTGCCTAGCACAAATTAATCATTTTAGGAA
CTCAGAATTTGTTGAATAAATTAAGGAAAGAAAAAGGAATATTACAGTAGAAATCCTAGT
TCTTCAGGTGAACTCTATGGTAGAATGCATATATGGCCAATTTCAAAAACAGAACTTTAT
GAAAATAATGCATACTTTCTGAAAATAAGCAGAATGGTCCTATTGGGATTAAGAAAACCA
CAACTTTGGGATGGGTTTTATATAATATTGTCACTCTTTCAGGCCAAGTGGGTCTAAAAT
CAATCCATAAAGAGCAAATGGACTTTTCAAATTTTATGCACCAGTAAAAATTGAGAAGGA
TATTGTTTGTGGCATCTATAAGTAGATCTTTATTCAGGAAGACATAAAATGGAAACTCTA
AATGCCAATAACGCTGAAGCTTATTTGTGAACATTA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GAACTCCTTAAGTAACATTTTAAATTTGGGACTGGCAAAATGGATTCTTTAGTGAGATCT
CCAGTTTCCCTTAAGGAAAAAAATTGTATTTCTTCTACCCAGAGGAAGTAATTAGTATGA
CATGTTACCCATTAATGTGAATTTTTGAAGTAGGTGGGTTATTACCATTTTTTTTAATAG
TAAGCTATAGAATTGGCTGTACCTTGTGTGGAGTTTTTTGTTTGTTTGTTTGTTTTTTGT
TTGTTTGTTTTT------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------CTTGTGTATAGCTTTGAGCTTGAGTGGGGGAGTAAGGTCTGCTTCTCC
ATCCCCATGTTAAGTGGGAGGTAGGGCATTAAATTGTTTCTTTTATAAACTACAAGCTTC
CTGAAAGCAGGGTTTGGGGCTCTCTGTCTAGTGCCTAGCACAAATTAATCATTTTAGGAA
CTCAGAATTTGTTGAATAAATTAAGGAAAGAAAAAGGAATATTACAGTAGAAATCCTAGT
TCTTCAGGTGAACTCTATGGTAGAATGCATATATGGCCAATTTCAAAAACAGAACTTTAT
GAAAATAATGCATACTTTCTGAAAATAAGCAGAATGGTCCTATTGGGATTAAGAAAACCA
CAACTTTGGGATGGGTTTTATATAATATTGTCACTCTTTCAGGCCAAGTGGGTCTAAAAT
CAATCCATAAAGAGCAAATGGACTTTTCAAATTTTATGCACCAGTAAAAATTGAGAAGGA
TATTGTTTGTGGCATCTATAAGTAGATCTTTATTCAGGAAGACATAAAATGGAAACTCTA
AATGCCAATAACGCTGAAGCTTATTTGTGAACATTA

Aligned organism(s): 2 entry(ies)

More info

Aligned organism(s): 2 entry(ies)

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               12-224, gnl|bosTau2|chr17 (31958520-31958731)
               

               
               12-224, gnl|Hg17|chr12 (117229280-117229074)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               12-224, gnl|bosTau2|chr17 (31958520-31958731)
               

               
               12-224, gnl|Hg17|chr12 (117229280-117229074)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               cbl (0.114797)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cbl (0.114797)

	12-224, gnl\|bosTau2\|chr17 (31958520-31958731)
	12-224, gnl\|Hg17\|chr12 (117229280-117229074)