Ss1.1-Pig4-TMW8029C18.3
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CCTTTCCCGGCGGTGGAAGCAGCGCAAGAACGTCCAGAACATCAACCTCTTTGTGGTGGA TGAGGTCCACCTCATCGGGGGCGAGAATGGGCCCGTCTTAGAGGTGATCTGCTCTCGGAT GCGCTACATCTCCTCCCAGATCGAACGGCCCATCCGCATCGTGGCCCTGAGCTCCTCGCT ATCAAATGCGAAGGATGTGGCCCACTGGCTGGGGTGCAGCGCCACCTCCACCTTCAACTT CCACCCGAACGTGCGCCCCGTGCCCCTGGAGCTGCACATCCAGGGCTTCAACATCAGCCA CACGCAGACTCGCCTGCTGTCCATGGCCAAGCCCGTGTACCACGCCATCACCAAGCACTC ACCCAAGAAGCCCGTCATCGTCTTCGTTCCATCTCGCAAGCAGACGCGCCTCACCGCCAT CGACATCCTCACCACGTGTGCAGCGGACATCCAGCGGCAGAGGTTCCTGCACTGCACAGA AAAGGACCTGATCCCATACCTGGAGAAGCTGGGCGACAGCACACTCAAGGAGACGCTGCT CAACGGGGTGGGCTACCTGCACGAGGGGCTCAGCCCCATGGAGCGGCGCCTGGTGGAACA GCTCTTCAGCTCAGGCGCCATCCAGGTGGTGGTAGCTTCTCGAAGTCTCTGCTGGGGCAT GAACGTGGCCGCCCACCTGGTCATCATCATGGACACCCAGTACTATAACGGCAAGATCCA CGCGTACGTGGACTACCCCATCTACGATGTGCTCCAGATGGTGGGCCGTGCCAACCGCCC CTTGCAGGATGACGAGGGGCGCTGCGTTATCATGTGCCAGGGCTCCAAAAAGGATTTCTT CAAAAAGTTCTTATATGAGCCTTTGCCAGTAGAGTCTCACCTGGACCACTGTATGCATGA CCACTTCAATGCAGAGATTGTCACCAAGACCATCGAGAACAAGCAGGACGCCGTGGACTA CCTCACCTGGACCTTTCTGTACCGCCGCATGACACAGAACCCCAACTATTACAACCTGCA GGGCATCTCCCATCGTCACCTGTCTGACCACTTGTCAGAGCTTGTGGAACAGACCCTGAG TGACCTGGAGCAGTCCAAGTGCATCAGTATTGAGGACGAGATGGACGTGGCGCCTCTGAA CCTGGGCATGATTGCTGCCTACTATTACATCAACTATACCACCATTGAGCTCTTCAGCAT GTCCCTGAACGCCAAGACCAAGGTGCGAGGGCTTATTGAGATCATCTCCAATGCGGCTGA GTATGAGAACATTCCCATCCGACACCATGAAGACAACCTGCTTCGGCAGTTGGCTCAGAA GGTCCCCCACAAGCTGAATAACCCCAAGTTCAACGACCCACACGTGAAGACCAACCTGCT TCTGCAGGCTCACCTGTCCCGCATGCAGCTGAGTGCTGAGCTGCAGTCGGATACAGAGGA AATCCTTAGCAAGGCCATCCGGCTCATCCAGGCCTGTGTGGATGTCCTCTCCAGCAACGG CTGGCTCAGCCCAGCCCTGGCAGCCATGGAGCTGGCCCAGATGGTCACGCAGGCCATGTG GTCCAAGGACTCATACCTGAAACAGCTGCCACACTTCACCTCAGAGCACATCAAACGCTG CACAGACAAGGGGGTGGAGAGTGTCTTCGACATCATGGAGATGGAAGATGAGGAGCGCAA CGCGTTGCTGCAACTGTCAGACAGCCAGATTGCAGACGTGGCCCGGTTCTGTAACCGCTA CCCCAACATCGAGCTGTCCTACGAAGTGGTGGATAAGGACAGTATCCGCAGTGGTGGGCC AGTTGTGGTGCTGGTGCAGCTGGAGCGAGAGGAAGAAGTCACAGGCCCTGTGATCGCACC TCTCTTCCCACAGAAACGTGAAGAGGGCTGGTGGGTGGTGATTGGAGATGCCAAGTCAAA CAGCCTCATCTCCATCAAGAGGCTGACCCTGCAGCAGAAGGCCAAGGTGAAGCTTGACTT CGTGGCCCCGGCCACTGGTGCCCACAACTACACTCTGTACTTCATGAGTGACGCCTACAT GGGGTGTGACCAGGAGTACAAATTCAGTGTGGATGTGAAAGAAGCTGAGACAGACAGTGA CTCAGATTGAGTCCAGAGGCACCTGCTCTTGAACAGGAAGGGTTGAACCTGAATTAGGAA CCTGCACCCCGTATGGGACCTCCATAGTGGCGACCCGGTCTGTGTGAAGTCTGGCCAGTC AGTGCTACAGTCCCGGCCCATCCACTACTTTCCTCTGGCTCCTTCAACAGCCAGACTTTG GATCCAGTGTCTGCAGTAGATGCTGAGCATAAACTGTGCACAGTGGTTTTAGGGATGTTC TTTGTAGTTCCTTTGGGGCACATTCTAGTAAAATGACTTGGAAAAACCATTTGTCTTTGC AGTGATTCCAAATTAAATTTCCTT |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CCTTTCCCGGCGGTGGAAGCAGCGCAAGAACGTCCAGAACATCAACCTCTTTGTGGTGGA TGAGGTCCACCTCATCGGGGGCGAGAATGGGCCCGTCTTAGAGGTGATCTGCTCTCGGAT GCGCTACATCTCCTCCCAGATCGAACGGCCCATCCGCATCGTGGCCCTGAGCTCCTCGCT ATCAAATGCGAAGGATGTGGCCCACTGGCTGGGGTGCAGCGCCACCTCCACCTTCAACTT CCACCCGAACGTGCGCCCCGTGCCCCTGGAGCTGCACATCCAGGGCTTCAACATCAGCCA CACGCAGACTCGCCTGCTGTCCATGGCCAAGCCCGTGTACCACGCCATCACCAAGCACTC ACCCAAGAAGCCCGTCATCGTCTTCGTTCCATCTCGCAAGCAGACGCGCCTCACCGCCAT CGACATCCTCACCACGTGTGCAGCGGACATCCAGCGGCAGAGGTTCCTGCACTGCACAGA AAAGGACCTGATCCCATACCTGGAGAAGCTGGGCGACAGCACACTCAAGGAGACGCTGCT CAACGGGGTGGGCTACCTGCACGAGGGGCTCAGCCCCATGGAGCGGCGCCTGGTGGAACA GCTCTTCAGCTCAGGCGCCATCCAGGTGGTGGTAGCTTCTCGAAGTCTCTGCTGGGGCAT GAACGTGGCCGCCCACCTGGTCATCATCATGGACACCCAGTACTATAACGGCAAGATCCA CGCGTACGTGGACTACCCCATCTACGATGTGCTCCAGATGGTGGGCCGTGCCAACCGCCC CTTGCAGGATGACGAGGGGCGCTGCGTTATCATGTGCCAGGGCTCCAAAAAGGATTTCTT CAAAAAGTTCTTATATGAGCCTTTGCCAGTAGAGTCTCACCTGGACCACTGTATGCATGA CCACTTCAATGCAGAGATTGTCACCAAGACCATCGAGAACAAGCAGGACGCCGTGGACTA CCTCACCTGGACCTTTCTGTACCGCCGCATGACACAGAACCCCAACTATTACAACCTGCA GGGCATCTCCCATCGTCACCTGTCTGACCACTTGTCAGAGCTTGTGGAACAGACCCTGAG TGACCTGGAGCAGTCCAAGTGCATCAGTATTGAGGACGAGATGGACGTGGCGCCTCTGAA CCTGGGCATGATTGCTGCCTACTATTACATCAACTATACCACCATTGAGCTCTTCAGCAT GTCCCTGAACGCCAAGACCAAGGTGCGAGGGCTTATTGAGATCATCTCCAATGCGGCTGA GTATGAGAACATTCCCATCCGACACCATGAAGACAACCTGCTTCGGCAGTTGGCTCAGAA GGTCCCCCACAAGCTGAATAACCCCAAGTTCAACGACCCACACGTGAAGACCAACCTGCT TCTGCAGGCTCACCTGTCCCGCATGCAGCTGAGTGCTGAGCTGCAGTCGGATACAGAGGA AATCCTTAGCAAGGCCATCCGGCTCATCCAGGCCTGTGTGGATGTCCTCTCCAGCAACGG CTGGCTCAGCCCAGCCCTGGCAGCCATGGAGCTGGCCCAGATGGTCACGCAGGCCATGTG GTCCAAGGACTCATACCTGAAACAGCTGCCACACTTCACCTCAGAGCACATCAAACGCTG CACAGACAAGGGGGTGGAGAGTGTCTTCGACATCATGGAGATGGAAGATGAGGAGCGCAA CGCGTTGCTGCAACTGTCAGACAGCCAGATTGCAGACGTGGCCCGGTTCTGTAACCGCTA CCCCAACATCGAGCTGTCCTACGAAGTGGTGGATAAGGACAGTATCCGCAGTGGTGGGCC AGTTGTGGTGCTGGTGCAGCTGGAGCGAGAGGAAGAAGTCACAGGCCCTGTGATCGCACC TCTCTTCCCACAGAAACGTGAAGAGGGCTGGTGGGTGGTGATTGGAGATGCCAAGTCAAA CAGCCTCATCTCCATCAAGAGGCTGACCCTGCAGCAGAAGGCCAAGGTGAAGCTTGACTT CGTGGCCCCGGCCACTGGTGCCCACAACTACACTCTGTACTTCATGAGTGACGCCTACAT GGGGTGTGACCAGGAGTACAAATTCAGTGTGGATGTGAAAGAAGCTGAGACAGACAGTGA CTCAGATTGAGTCCAGAGGCACCTGCTCTTGAACAGGAAGGGTTGAACCTGAATTAGGAA CCTGCACCCCGTATGGGACCTCCATAGTGGCGACCCGGTCTGTGTGAAGTCTGGCCAGTC AGTGCTACAGTCCCGGCCCATCCACTACTTTCCTCTGGCTCCTTCAACAGCCAGACTTTG GATCCAGTGTCTGCAGTAGATGCTGAGCATAAACTGTGCACAGTGGTTTTAGGGATGTTC TTTGTAGTTCCTTTGGGGCACATTCTAGTAAAATGACTTGGAAAAACCATTTGTCTTTGC AGTGATTCCAAATTAAATTTCCTT |
| Coded protein: 1 entry(ies) | More info |
| Predicted RNA structure(s): 3 entry(ies) | More info |
| Predicted RNA structure(s): 3 entry(ies) | Help | Less info |
| 1491-1610, + strand, RNAz p=0.623869 | |
| 1965-2083, + strand, RNAz p=0.693139 | |
| 2053-2160, - strand, RNAz p=0.921782 |
| Predicted RNA structure(s): 3 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 1491-1610, + strand, RNAz p=0.623869 | |
| 1965-2083, + strand, RNAz p=0.693139 | |
| 2053-2160, - strand, RNAz p=0.921782 |
| Homologous human UTR: 1 entry(ies) | More info |
| Homologous human UTR: 1 entry(ies) | Help | Less info |
Human gene identifier and UTR site,
human gene reading direction
human gene reading direction
| 5' of AK024391, + |
| Aligned organism(s): 156 entry(ies) | More info |
| Aligned organism(s): 156 entry(ies) | Help | Less info |
| 281-464, gnl|bosTau2|chr11 (1734009-1734192) | |
| 281-464, gnl|canFam2|chr17 (37605786-37605568) | |
| 281-464, gnl|danRer3|chr8 (23986352-23986559) | |
| 281-464, gnl|dasNov1|scaffold_36333 (8592-8379) | |
| 281-464, gnl|fr1|chrUn (264988719-264988502) | |
| 281-464, gnl|hg17|chr2 (96371145-96371367) | |
| 281-464, gnl|Hg17|chr2 (96371328-96371145) | |
| 281-464, gnl|loxAfr1|scaffold_1969 (61734-61955) | |
| 281-464, gnl|mm7|chr2 (126974215-126973997) | |
| 281-464, gnl|Mm7|chr2 (126974030-126974213) | |
| 281-464, gnl|monDom2|scaffold_1 (67361594-67361814) | |
| 281-464, gnl|oryCun1|scaffold_181426 (47689-47911) | |
| 281-464, gnl|panTro1|chr12 (99383739-99383961) | |
| 281-464, gnl|rheMac2|chr13 (96783998-96784220) | |
| 281-464, gnl|rn3|chr3 (114637955-114637737) | |
| 281-464, gnl|tetNig1|chrUn_random (43988021-43987841) | |
| 281-464, gnl|xenTro1|scaffold_217 (790-1040) | |
| 602-725, gnl|bosTau2|chr11 (1735297-1735420) | |
| 602-725, gnl|canFam2|chr17 (37607076-37606956) | |
| 602-725, gnl|danRer3|chr8 (23985629-23985744) | |
| 602-725, gnl|dasNov1|scaffold_36333 (9852-9732) | |
| 602-725, gnl|echTel1|scaffold_309853 (7093-6980) | |
| 602-725, gnl|fr1|chrUn (264989223-264989105) | |
| 602-725, gnl|hg17|chr2 (96369418-96369538) | |
| 602-725, gnl|Hg17|chr2 (96369547-96369424) | |
| 602-725, gnl|loxAfr1|scaffold_1969 (60302-60422) | |
| 602-725, gnl|mm7|chr2 (126975935-126975815) | |
| 602-725, gnl|Mm7|chr2 (126975804-126975927) | |
| 602-725, gnl|monDom2|scaffold_1 (67360505-67360625) | |
| 602-725, gnl|oryCun1|scaffold_181426 (46433-46553) | |
| 602-725, gnl|panTro1|chr12 (99382012-99382132) | |
| 602-725, gnl|rheMac2|chr13 (96782029-96782149) | |
| 602-725, gnl|rn3|chr3 (114639162-114639042) | |
| 602-725, gnl|tetNig1|chrUn_random (33198143-33198259) | |
| 602-725, gnl|xenTro1|scaffold_407 (3903-3783) | |
| 831-1023, gnl|bosTau2|chr11 (1736711-1736903) | |
| 831-1023, gnl|Hg17|chr2 (96366612-96366420) | |
| 831-1023, gnl|Mm7|chr2 (126977310-126977502) | |
| 1187-1312, gnl|bosTau2|chr11 (1737334-1737459) | |
| 1187-1312, gnl|canFam2|chr17 (37609674-37609777) | |
| 1187-1312, gnl|canFam2|chr17 (37609789-37609647) | |
| 1187-1312, gnl|danRer3|chr8 (23983954-23983867) | |
| 1187-1312, gnl|danRer3|chr8 (23983855-23983997) | |
| 1187-1312, gnl|dasNov1|scaffold_36333 (12254-12357) | |
| 1187-1312, gnl|dasNov1|scaffold_36333 (12367-12230) | |
| 1187-1312, gnl|echTel1|scaffold_260490 (3698-3599) | |
| 1187-1312, gnl|echTel1|scaffold_260490 (3588-3725) | |
| 1187-1312, gnl|fr1|chrUn (264990112-264990199) | |
| 1187-1312, gnl|fr1|chrUn (264990211-264990069) | |
| 1187-1312, gnl|galGal2|chrUn (144135720-144135807) | |
| 1187-1312, gnl|galGal2|chrUn (125145184-125145040) | |
| 1187-1312, gnl|hg17|chr17 (60176985-60177088) | |
| 1187-1312, gnl|hg17|chr2 (96365840-96365982) | |
| 1187-1312, gnl|Hg17|chr2 (96365971-96365828) | |
| 1187-1312, gnl|loxAfr1|scaffold_1969 (57992-57893) | |
| 1187-1312, gnl|loxAfr1|scaffold_1969 (57882-58012) | |
| 1187-1312, gnl|mm7|chr2 (126978332-126978433) | |
| 1187-1312, gnl|mm7|chr2 (126978446-126978304) | |
| 1187-1312, gnl|Mm7|chr2 (126978313-126978438) | |
| 1187-1312, gnl|monDom2|scaffold_1 (67356210-67356109) | |
| 1187-1312, gnl|monDom2|scaffold_1 (67356098-67356238) | |
| 1187-1312, gnl|oryCun1|scaffold_181426 (43304-43202) | |
| 1187-1312, gnl|oryCun1|scaffold_181426 (43190-43331) | |
| 1187-1312, gnl|panTro1|chr12 (99378439-99378581) | |
| 1187-1312, gnl|panTro1|chr19 (63557101-63557204) | |
| 1187-1312, gnl|rheMac2|chr13 (96778840-96778982) | |
| 1187-1312, gnl|rheMac2|chr16 (60291932-60292035) | |
| 1187-1312, gnl|rn3|chr3 (114641141-114641239) | |
| 1187-1312, gnl|rn3|chr3 (114641255-114641113) | |
| 1187-1312, gnl|tetNig1|chrUn_random (33197229-33197142) | |
| 1187-1312, gnl|tetNig1|chrUn_random (33197130-33197272) | |
| 1187-1312, gnl|xenTro1|scaffold_407 (4847-4945) | |
| 1187-1312, gnl|xenTro1|scaffold_407 (4963-4828) | |
| 1452-1631, gnl|bosTau2|chr11 (1737955-1738134) | |
| 1452-1631, gnl|canFam2|chr17 (37610262-37610435) | |
| 1452-1631, gnl|canFam2|chr17 (37610449-37610246) | |
| 1452-1631, gnl|danRer3|chr8 (23982748-23982572) | |
| 1452-1631, gnl|danRer3|chr8 (23982565-23982759) | |
| 1452-1631, gnl|dasNov1|scaffold_36333 (12755-12928) | |
| 1452-1631, gnl|dasNov1|scaffold_36333 (12942-12739) | |
| 1452-1631, gnl|echTel1|scaffold_260490 (3146-2970) | |
| 1452-1631, gnl|echTel1|scaffold_260490 (2957-3158) | |
| 1452-1631, gnl|fr1|chrUn (264990499-264990675) | |
| 1452-1631, gnl|fr1|chrUn (264990688-264990488) | |
| 1452-1631, gnl|galGal2|chrUn (144136145-144136318) | |
| 1452-1631, gnl|galGal2|chrUn (144136346-144136126) | |
| 1452-1631, gnl|hg17|chr17 (60177233-60177409) | |
| 1452-1631, gnl|hg17|chr2 (96365140-96365343) | |
| 1452-1631, gnl|Hg17|chr2 (96365329-96365150) | |
| 1452-1631, gnl|loxAfr1|scaffold_1969 (57431-57255) | |
| 1452-1631, gnl|loxAfr1|scaffold_1969 (57242-57444) | |
| 1452-1631, gnl|mm7|chr2 (126978911-126979087) | |
| 1452-1631, gnl|mm7|chr2 (126979099-126978898) | |
| 1452-1631, gnl|Mm7|chr2 (126978910-126979089) | |
| 1452-1631, gnl|monDom2|scaffold_1 (67355639-67355466) | |
| 1452-1631, gnl|monDom2|scaffold_1 (67355451-67355651) | |
| 1452-1631, gnl|oryCun1|scaffold_181426 (42707-42531) | |
| 1452-1631, gnl|oryCun1|scaffold_181426 (42520-42720) | |
| 1452-1631, gnl|panTro1|chr12 (99377739-99377942) | |
| 1452-1631, gnl|panTro1|chr19 (63557349-63557525) | |
| 1452-1631, gnl|rheMac2|chr13 (96778148-96778350) | |
| 1452-1631, gnl|rheMac2|chr16 (60292180-60292356) | |
| 1452-1631, gnl|rn3|chr3 (114641691-114641867) | |
| 1452-1631, gnl|rn3|chr3 (114641879-114641678) | |
| 1452-1631, gnl|tetNig1|chrUn_random (33196823-33196647) | |
| 1452-1631, gnl|tetNig1|chrUn_random (33196645-33196834) | |
| 1452-1631, gnl|xenTro1|scaffold_407 (6115-6288) | |
| 1452-1631, gnl|xenTro1|scaffold_407 (6295-6075) | |
| 1786-1891, gnl|bosTau2|chr11 (1738735-1738839) | |
| 1786-1891, gnl|canFam2|chr17 (37611115-37610977) | |
| 1786-1891, gnl|danRer3|chr8 (23981130-23981224) | |
| 1786-1891, gnl|echTel1|scaffold_260490 (2346-2476) | |
| 1786-1891, gnl|fr1|chrUn (264991097-264990978) | |
| 1786-1891, gnl|hg17|chr2 (96364499-96364636) | |
| 1786-1891, gnl|Hg17|chr2 (96364603-96364498) | |
| 1786-1891, gnl|loxAfr1|scaffold_1969 (56582-56717) | |
| 1786-1891, gnl|mm7|chr2 (126979697-126979562) | |
| 1786-1891, gnl|Mm7|chr2 (126979586-126979696) | |
| 1786-1891, gnl|monDom2|scaffold_1 (67354753-67354882) | |
| 1786-1891, gnl|oryCun1|scaffold_181426 (41920-42074) | |
| 1786-1891, gnl|panTro1|chr12 (99377098-99377235) | |
| 1786-1891, gnl|rheMac2|chr13 (96777509-96777646) | |
| 1786-1891, gnl|rn3|chr3 (114642480-114642350) | |
| 1786-1891, gnl|tetNig1|chrUn_random (33196102-33196200) | |
| 1786-1891, gnl|xenTro1|scaffold_407 (7331-7201) | |
| 1965-2198, gnl|bosTau2|chr11 (1739606-1739837) | |
| 1965-2198, gnl|canFam2|chr17 (37613810-37613955) | |
| 1965-2198, gnl|danRer3|chr8 (23980626-23980473) | |
| 1965-2198, gnl|dasNov1|scaffold_36333 (14498-14742) | |
| 1965-2198, gnl|echTel1|scaffold_260490 (769-624) | |
| 1965-2198, gnl|fr1|chrUn (264991351-264991504) | |
| 1965-2198, gnl|galGal2|chrUn (90127776-90127626) | |
| 1965-2198, gnl|hg17|chr17 (60177750-60177897) | |
| 1965-2198, gnl|Hg17|chr2 (96362769-96362536) | |
| 1965-2198, gnl|mm7|chr2 (126980828-126981071) | |
| 1965-2198, gnl|Mm7|chr2 (126980920-126981144) | |
| 1965-2198, gnl|monDom2|scaffold_1 (67351487-67351342) | |
| 1965-2198, gnl|oryCun1|scaffold_181426 (40547-40305) | |
| 1965-2198, gnl|panTro1|chr19 (63557866-63558013) | |
| 1965-2198, gnl|rheMac2|chr16 (60292697-60292844) | |
| 1965-2198, gnl|rn3|chr3 (114643617-114643860) | |
| 1965-2198, gnl|tetNig1|chrUn_random (33195518-33195370) | |
| 1965-2198, gnl|xenTro1|scaffold_407 (8292-8442) | |
| 2232-2424, gnl|bosTau2|chr11 (1739839-1740026) | |
| 2232-2424, gnl|canFam2|chr17 (37614282-37614026) | |
| 2232-2424, gnl|dasNov1|scaffold_36333 (15081-14821) | |
| 2232-2424, gnl|echTel1|scaffold_260490 (309-541) | |
| 2232-2424, gnl|hg17|chr2 (96362293-96362535) | |
| 2232-2424, gnl|Hg17|chr2 (96362534-96362306) | |
| 2232-2424, gnl|mm7|chr2 (126981346-126981108) | |
| 2232-2424, gnl|Mm7|chr2 (126981146-126981330) | |
| 2232-2424, gnl|monDom2|scaffold_1 (67351020-67351274) | |
| 2232-2424, gnl|oryCun1|scaffold_181426 (40014-40236) | |
| 2232-2424, gnl|panTro1|chr12 (99374858-99375100) | |
| 2232-2424, gnl|rheMac2|chr13 (96775613-96775856) | |
| 2232-2424, gnl|rn3|chr3 (114644164-114643923) |
| Aligned organism(s): 156 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 281-464, gnl|bosTau2|chr11 (1734009-1734192) | |
| 281-464, gnl|canFam2|chr17 (37605786-37605568) | |
| 281-464, gnl|danRer3|chr8 (23986352-23986559) | |
| 281-464, gnl|dasNov1|scaffold_36333 (8592-8379) | |
| 281-464, gnl|fr1|chrUn (264988719-264988502) | |
| 281-464, gnl|hg17|chr2 (96371145-96371367) | |
| 281-464, gnl|Hg17|chr2 (96371328-96371145) | |
| 281-464, gnl|loxAfr1|scaffold_1969 (61734-61955) | |
| 281-464, gnl|mm7|chr2 (126974215-126973997) | |
| 281-464, gnl|Mm7|chr2 (126974030-126974213) | |
| 281-464, gnl|monDom2|scaffold_1 (67361594-67361814) | |
| 281-464, gnl|oryCun1|scaffold_181426 (47689-47911) | |
| 281-464, gnl|panTro1|chr12 (99383739-99383961) | |
| 281-464, gnl|rheMac2|chr13 (96783998-96784220) | |
| 281-464, gnl|rn3|chr3 (114637955-114637737) | |
| 281-464, gnl|tetNig1|chrUn_random (43988021-43987841) | |
| 281-464, gnl|xenTro1|scaffold_217 (790-1040) | |
| 602-725, gnl|bosTau2|chr11 (1735297-1735420) | |
| 602-725, gnl|canFam2|chr17 (37607076-37606956) | |
| 602-725, gnl|danRer3|chr8 (23985629-23985744) | |
| 602-725, gnl|dasNov1|scaffold_36333 (9852-9732) | |
| 602-725, gnl|echTel1|scaffold_309853 (7093-6980) | |
| 602-725, gnl|fr1|chrUn (264989223-264989105) | |
| 602-725, gnl|hg17|chr2 (96369418-96369538) | |
| 602-725, gnl|Hg17|chr2 (96369547-96369424) | |
| 602-725, gnl|loxAfr1|scaffold_1969 (60302-60422) | |
| 602-725, gnl|mm7|chr2 (126975935-126975815) | |
| 602-725, gnl|Mm7|chr2 (126975804-126975927) | |
| 602-725, gnl|monDom2|scaffold_1 (67360505-67360625) | |
| 602-725, gnl|oryCun1|scaffold_181426 (46433-46553) | |
| 602-725, gnl|panTro1|chr12 (99382012-99382132) | |
| 602-725, gnl|rheMac2|chr13 (96782029-96782149) | |
| 602-725, gnl|rn3|chr3 (114639162-114639042) | |
| 602-725, gnl|tetNig1|chrUn_random (33198143-33198259) | |
| 602-725, gnl|xenTro1|scaffold_407 (3903-3783) | |
| 831-1023, gnl|bosTau2|chr11 (1736711-1736903) | |
| 831-1023, gnl|Hg17|chr2 (96366612-96366420) | |
| 831-1023, gnl|Mm7|chr2 (126977310-126977502) | |
| 1187-1312, gnl|bosTau2|chr11 (1737334-1737459) | |
| 1187-1312, gnl|canFam2|chr17 (37609674-37609777) | |
| 1187-1312, gnl|canFam2|chr17 (37609789-37609647) | |
| 1187-1312, gnl|danRer3|chr8 (23983954-23983867) | |
| 1187-1312, gnl|danRer3|chr8 (23983855-23983997) | |
| 1187-1312, gnl|dasNov1|scaffold_36333 (12254-12357) | |
| 1187-1312, gnl|dasNov1|scaffold_36333 (12367-12230) | |
| 1187-1312, gnl|echTel1|scaffold_260490 (3698-3599) | |
| 1187-1312, gnl|echTel1|scaffold_260490 (3588-3725) | |
| 1187-1312, gnl|fr1|chrUn (264990112-264990199) | |
| 1187-1312, gnl|fr1|chrUn (264990211-264990069) | |
| 1187-1312, gnl|galGal2|chrUn (144135720-144135807) | |
| 1187-1312, gnl|galGal2|chrUn (125145184-125145040) | |
| 1187-1312, gnl|hg17|chr17 (60176985-60177088) | |
| 1187-1312, gnl|hg17|chr2 (96365840-96365982) | |
| 1187-1312, gnl|Hg17|chr2 (96365971-96365828) | |
| 1187-1312, gnl|loxAfr1|scaffold_1969 (57992-57893) | |
| 1187-1312, gnl|loxAfr1|scaffold_1969 (57882-58012) | |
| 1187-1312, gnl|mm7|chr2 (126978332-126978433) | |
| 1187-1312, gnl|mm7|chr2 (126978446-126978304) | |
| 1187-1312, gnl|Mm7|chr2 (126978313-126978438) | |
| 1187-1312, gnl|monDom2|scaffold_1 (67356210-67356109) | |
| 1187-1312, gnl|monDom2|scaffold_1 (67356098-67356238) | |
| 1187-1312, gnl|oryCun1|scaffold_181426 (43304-43202) | |
| 1187-1312, gnl|oryCun1|scaffold_181426 (43190-43331) | |
| 1187-1312, gnl|panTro1|chr12 (99378439-99378581) | |
| 1187-1312, gnl|panTro1|chr19 (63557101-63557204) | |
| 1187-1312, gnl|rheMac2|chr13 (96778840-96778982) | |
| 1187-1312, gnl|rheMac2|chr16 (60291932-60292035) | |
| 1187-1312, gnl|rn3|chr3 (114641141-114641239) | |
| 1187-1312, gnl|rn3|chr3 (114641255-114641113) | |
| 1187-1312, gnl|tetNig1|chrUn_random (33197229-33197142) | |
| 1187-1312, gnl|tetNig1|chrUn_random (33197130-33197272) | |
| 1187-1312, gnl|xenTro1|scaffold_407 (4847-4945) | |
| 1187-1312, gnl|xenTro1|scaffold_407 (4963-4828) | |
| 1452-1631, gnl|bosTau2|chr11 (1737955-1738134) | |
| 1452-1631, gnl|canFam2|chr17 (37610262-37610435) | |
| 1452-1631, gnl|canFam2|chr17 (37610449-37610246) | |
| 1452-1631, gnl|danRer3|chr8 (23982748-23982572) | |
| 1452-1631, gnl|danRer3|chr8 (23982565-23982759) | |
| 1452-1631, gnl|dasNov1|scaffold_36333 (12755-12928) | |
| 1452-1631, gnl|dasNov1|scaffold_36333 (12942-12739) | |
| 1452-1631, gnl|echTel1|scaffold_260490 (3146-2970) | |
| 1452-1631, gnl|echTel1|scaffold_260490 (2957-3158) | |
| 1452-1631, gnl|fr1|chrUn (264990499-264990675) | |
| 1452-1631, gnl|fr1|chrUn (264990688-264990488) | |
| 1452-1631, gnl|galGal2|chrUn (144136145-144136318) | |
| 1452-1631, gnl|galGal2|chrUn (144136346-144136126) | |
| 1452-1631, gnl|hg17|chr17 (60177233-60177409) | |
| 1452-1631, gnl|hg17|chr2 (96365140-96365343) | |
| 1452-1631, gnl|Hg17|chr2 (96365329-96365150) | |
| 1452-1631, gnl|loxAfr1|scaffold_1969 (57431-57255) | |
| 1452-1631, gnl|loxAfr1|scaffold_1969 (57242-57444) | |
| 1452-1631, gnl|mm7|chr2 (126978911-126979087) | |
| 1452-1631, gnl|mm7|chr2 (126979099-126978898) | |
| 1452-1631, gnl|Mm7|chr2 (126978910-126979089) | |
| 1452-1631, gnl|monDom2|scaffold_1 (67355639-67355466) | |
| 1452-1631, gnl|monDom2|scaffold_1 (67355451-67355651) | |
| 1452-1631, gnl|oryCun1|scaffold_181426 (42707-42531) | |
| 1452-1631, gnl|oryCun1|scaffold_181426 (42520-42720) | |
| 1452-1631, gnl|panTro1|chr12 (99377739-99377942) | |
| 1452-1631, gnl|panTro1|chr19 (63557349-63557525) | |
| 1452-1631, gnl|rheMac2|chr13 (96778148-96778350) | |
| 1452-1631, gnl|rheMac2|chr16 (60292180-60292356) | |
| 1452-1631, gnl|rn3|chr3 (114641691-114641867) | |
| 1452-1631, gnl|rn3|chr3 (114641879-114641678) | |
| 1452-1631, gnl|tetNig1|chrUn_random (33196823-33196647) | |
| 1452-1631, gnl|tetNig1|chrUn_random (33196645-33196834) | |
| 1452-1631, gnl|xenTro1|scaffold_407 (6115-6288) | |
| 1452-1631, gnl|xenTro1|scaffold_407 (6295-6075) | |
| 1786-1891, gnl|bosTau2|chr11 (1738735-1738839) | |
| 1786-1891, gnl|canFam2|chr17 (37611115-37610977) | |
| 1786-1891, gnl|danRer3|chr8 (23981130-23981224) | |
| 1786-1891, gnl|echTel1|scaffold_260490 (2346-2476) | |
| 1786-1891, gnl|fr1|chrUn (264991097-264990978) | |
| 1786-1891, gnl|hg17|chr2 (96364499-96364636) | |
| 1786-1891, gnl|Hg17|chr2 (96364603-96364498) | |
| 1786-1891, gnl|loxAfr1|scaffold_1969 (56582-56717) | |
| 1786-1891, gnl|mm7|chr2 (126979697-126979562) | |
| 1786-1891, gnl|Mm7|chr2 (126979586-126979696) | |
| 1786-1891, gnl|monDom2|scaffold_1 (67354753-67354882) | |
| 1786-1891, gnl|oryCun1|scaffold_181426 (41920-42074) | |
| 1786-1891, gnl|panTro1|chr12 (99377098-99377235) | |
| 1786-1891, gnl|rheMac2|chr13 (96777509-96777646) | |
| 1786-1891, gnl|rn3|chr3 (114642480-114642350) | |
| 1786-1891, gnl|tetNig1|chrUn_random (33196102-33196200) | |
| 1786-1891, gnl|xenTro1|scaffold_407 (7331-7201) | |
| 1965-2198, gnl|bosTau2|chr11 (1739606-1739837) | |
| 1965-2198, gnl|canFam2|chr17 (37613810-37613955) | |
| 1965-2198, gnl|danRer3|chr8 (23980626-23980473) | |
| 1965-2198, gnl|dasNov1|scaffold_36333 (14498-14742) | |
| 1965-2198, gnl|echTel1|scaffold_260490 (769-624) | |
| 1965-2198, gnl|fr1|chrUn (264991351-264991504) | |
| 1965-2198, gnl|galGal2|chrUn (90127776-90127626) | |
| 1965-2198, gnl|hg17|chr17 (60177750-60177897) | |
| 1965-2198, gnl|Hg17|chr2 (96362769-96362536) | |
| 1965-2198, gnl|mm7|chr2 (126980828-126981071) | |
| 1965-2198, gnl|Mm7|chr2 (126980920-126981144) | |
| 1965-2198, gnl|monDom2|scaffold_1 (67351487-67351342) | |
| 1965-2198, gnl|oryCun1|scaffold_181426 (40547-40305) | |
| 1965-2198, gnl|panTro1|chr19 (63557866-63558013) | |
| 1965-2198, gnl|rheMac2|chr16 (60292697-60292844) | |
| 1965-2198, gnl|rn3|chr3 (114643617-114643860) | |
| 1965-2198, gnl|tetNig1|chrUn_random (33195518-33195370) | |
| 1965-2198, gnl|xenTro1|scaffold_407 (8292-8442) | |
| 2232-2424, gnl|bosTau2|chr11 (1739839-1740026) | |
| 2232-2424, gnl|canFam2|chr17 (37614282-37614026) | |
| 2232-2424, gnl|dasNov1|scaffold_36333 (15081-14821) | |
| 2232-2424, gnl|echTel1|scaffold_260490 (309-541) | |
| 2232-2424, gnl|hg17|chr2 (96362293-96362535) | |
| 2232-2424, gnl|Hg17|chr2 (96362534-96362306) | |
| 2232-2424, gnl|mm7|chr2 (126981346-126981108) | |
| 2232-2424, gnl|Mm7|chr2 (126981146-126981330) | |
| 2232-2424, gnl|monDom2|scaffold_1 (67351020-67351274) | |
| 2232-2424, gnl|oryCun1|scaffold_181426 (40014-40236) | |
| 2232-2424, gnl|panTro1|chr12 (99374858-99375100) | |
| 2232-2424, gnl|rheMac2|chr13 (96775613-96775856) | |
| 2232-2424, gnl|rn3|chr3 (114644164-114643923) |
| Expressed library(ies): 29 entry(ies) | More info |
| Expressed library(ies): 29 entry(ies) | Help | Less info |
| amn (0.417711) | |
| eye (0.341006) | |
| eje (0.296501) | |
| cte (0.29274) | |
| spl (0.286369) | |
| cst (0.280073) | |
| cga (0.279096) | |
| thg (0.253582) | |
| eep (0.245128) | |
| cly (0.241284) | |
| ebs (0.236602) | |
| nms (0.213858) | |
| col (0.195008) | |
| cmu (0.186393) | |
| sto (0.179824) | |
| cki (0.165235) | |
| eli (0.151814) | |
| cag (0.151194) | |
| csk (0.140746) | |
| ste (0.135208) | |
| pla (0.133672) | |
| nmm (0.132802) | |
| ova (0.129132) | |
| bla (0.124347) | |
| eru (0.120048) | |
| pgl (0.118483) | |
| ecc (0.115035) | |
| cbl (0.114797) | |
| spc (0.113366) |
| Expressed library(ies): 29 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| amn (0.417711) | |
| eye (0.341006) | |
| eje (0.296501) | |
| cte (0.29274) | |
| spl (0.286369) | |
| cst (0.280073) | |
| cga (0.279096) | |
| thg (0.253582) | |
| eep (0.245128) | |
| cly (0.241284) | |
| ebs (0.236602) | |
| nms (0.213858) | |
| col (0.195008) | |
| cmu (0.186393) | |
| sto (0.179824) | |
| cki (0.165235) | |
| eli (0.151814) | |
| cag (0.151194) | |
| csk (0.140746) | |
| ste (0.135208) | |
| pla (0.133672) | |
| nmm (0.132802) | |
| ova (0.129132) | |
| bla (0.124347) | |
| eru (0.120048) | |
| pgl (0.118483) | |
| ecc (0.115035) | |
| cbl (0.114797) | |
| spc (0.113366) |