Ss1.1-Pig4-TMW8029K08.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| TAGATCGCGACTGGAGTTTTTTTTTTTTTTTTTTTGTATAAAAAAGAGGTTTATTGAGCT GTTAGAATCATGTCATAATTGAACAGGACTGGACATTAAACAACACAGGCTTCAGGGGGG AACTGGTGACCTGCCTCGAGAGCTCACTGGCAATTTCTACATGCAACTGGGACGGCCAGT TGGCTCGCTGGCCTTTGTGCTTTGAAACGCTTTTCCGAACGAAGGCTGTGTCCACGGTAT TCAGAAGTCACGCCTGGGCCTCCCAGGGCCAGGGGCTCTTTTACACCACGAGTCCTGTCC CGCGGGGCCCCAACACGGACGGCTGGGCACTCCTGTGAGTCGCAGGGAGGCCCCCAGCGG CCGCCTTCCCCAGGCGTGAACTGCGGCCACCACTGGCCGCGGCCACCAGCATCAACCCTA AAGGGCCAGGGCGGTCGGAACCAAGCGTCTGCTGATCTAAGACATGTGTGGAGATGACGA AACCTGTAAGGGGGACGCCCTACGAAACGGAATGATGGGATTTGCTCAAAAATACTTTTG TACAGCACTTTAAATAATTTACAAAAAAGCTACAAAAATCATATTTACTGGGACACGTCT GTTAAATAAAAACATTGTTTCGCGTTAGTGTACAAATATACAGGCTGTACAGGGCGTGTC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| TAGATCGCGACTGGAGTTTTTTTTTTTTTTTTTTTGTATAAAAAAGAGGTTTATTGAGCT GTTAGAATCATGTCATAATTGAACAGGACTGGACATTAAACAACACAGGCTTCAGGGGGG AACTGGTGACCTGCCTCGAGAGCTCACTGGCAATTTCTACATGCAACTGGGACGGCCAGT TGGCTCGCTGGCCTTTGTGCTTTGAAACGCTTTTCCGAACGAAGGCTGTGTCCACGGTAT TCAGAAGTCACGCCTGGGCCTCCCAGGGCCAGGGGCTCTTTTACACCACGAGTCCTGTCC CGCGGGGCCCCAACACGGACGGCTGGGCACTCCTGTGAGTCGCAGGGAGGCCCCCAGCGG CCGCCTTCCCCAGGCGTGAACTGCGGCCACCACTGGCCGCGGCCACCAGCATCAACCCTA AAGGGCCAGGGCGGTCGGAACCAAGCGTCTGCTGATCTAAGACATGTGTGGAGATGACGA AACCTGTAAGGGGGACGCCCTACGAAACGGAATGATGGGATTTGCTCAAAAATACTTTTG TACAGCACTTTAAATAATTTACAAAAAAGCTACAAAAATCATATTTACTGGGACACGTCT GTTAAATAAAAACATTGTTTCGCGTTAGTGTACAAATATACAGGCTGTACAGGGCGTGTC |
| Aligned organism(s): 22 entry(ies) | More info |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
| 41-215, gnl|bosTau2|chr11 (86096057-86095888) | |
| 41-215, gnl|canFam2|chr9 (54544655-54544306) | |
| 41-215, gnl|canFam2|chr9 (54544281-54544589) | |
| 41-215, gnl|dasNov1|scaffold_129668 (5068-4735) | |
| 41-215, gnl|dasNov1|scaffold_129668 (4712-5002) | |
| 41-215, gnl|hg17|chr13 (47788165-47788518) | |
| 41-215, gnl|hg17|chr9 (135606313-135606620) | |
| 41-215, gnl|Hg17|chr9 (135606677-135606499) | |
| 41-215, gnl|loxAfr1|scaffold_81505 (4843-4512) | |
| 41-215, gnl|loxAfr1|scaffold_81505 (4489-4798) | |
| 41-215, gnl|mm7|chr2 (28461975-28461708) | |
| 41-215, gnl|mm7|chr2 (28461702-28461917) | |
| 41-215, gnl|Mm7|chr2 (28461968-28461818) | |
| 41-215, gnl|panTro1|chr11 (120504657-120504964) | |
| 41-215, gnl|panTro1|chr14_random (13851213-13851566) | |
| 41-215, gnl|rheMac2|chr15 (2818100-2817796) | |
| 41-215, gnl|rheMac2|chr17 (27109311-27109666) | |
| 41-215, gnl|rn3|chr16 (2086958-2086681) | |
| 41-215, gnl|rn3|chr3 (7443599-7443814) | |
| 270-654, gnl|bosTau2|chr11 (86095852-86095468) | |
| 270-654, gnl|Hg17|chr9 (135606435-135606037) | |
| 270-654, gnl|Mm7|chr2 (28461792-28461444) |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 41-215, gnl|bosTau2|chr11 (86096057-86095888) | |
| 41-215, gnl|canFam2|chr9 (54544655-54544306) | |
| 41-215, gnl|canFam2|chr9 (54544281-54544589) | |
| 41-215, gnl|dasNov1|scaffold_129668 (5068-4735) | |
| 41-215, gnl|dasNov1|scaffold_129668 (4712-5002) | |
| 41-215, gnl|hg17|chr13 (47788165-47788518) | |
| 41-215, gnl|hg17|chr9 (135606313-135606620) | |
| 41-215, gnl|Hg17|chr9 (135606677-135606499) | |
| 41-215, gnl|loxAfr1|scaffold_81505 (4843-4512) | |
| 41-215, gnl|loxAfr1|scaffold_81505 (4489-4798) | |
| 41-215, gnl|mm7|chr2 (28461975-28461708) | |
| 41-215, gnl|mm7|chr2 (28461702-28461917) | |
| 41-215, gnl|Mm7|chr2 (28461968-28461818) | |
| 41-215, gnl|panTro1|chr11 (120504657-120504964) | |
| 41-215, gnl|panTro1|chr14_random (13851213-13851566) | |
| 41-215, gnl|rheMac2|chr15 (2818100-2817796) | |
| 41-215, gnl|rheMac2|chr17 (27109311-27109666) | |
| 41-215, gnl|rn3|chr16 (2086958-2086681) | |
| 41-215, gnl|rn3|chr3 (7443599-7443814) | |
| 270-654, gnl|bosTau2|chr11 (86095852-86095468) | |
| 270-654, gnl|Hg17|chr9 (135606435-135606037) | |
| 270-654, gnl|Mm7|chr2 (28461792-28461444) |
| Expressed library(ies): 3 entry(ies) | More info |
| Expressed library(ies): 3 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| hyp (0.142837) | |
| pty (0.142714) | |
| ebs (0.118301) |