Ss1.1-Pig4-TMW8029K11.5
|
GGAATCCACGTTGTCTCTTTGATGGCGTGGGCTCGACTGGCCTCGAGGCTGGAGAGACAC
GGAGTGGAGCTCCAGGTGGCCAAGGCAGAGGTGGAGCTGAGCGTGAGGCGGCTTCGGGCA
TGGGGGGCCCGCGTCCAGGCCCAAGGCTGCACCCTACAGGTAGCAGAGCTGAGAGGCCCC
GTGCTTCGGCTGCGGGAGCCGCTGGGTGTGCTGGCTATTGTGTGCCCAGACGAGTGGCCC
CTGCTTGCCTTCGTGTCTCTGCTGGCTCCCGCCCTGGCCCACGGCAACACCGTGGTCTTG
GTGCCCAGTGGGGCCTGTCCCATCCCTGCCTTGGAGGTCTGCCAGGATATGGCTGCCCTG
TTGCCAGCGGGCCTGGTGAATGTGGTGACAGGAGACCCGGACCACCTGACCCGCTGCCTG
GCCTTGCACCAGGACATCCAGGCCCTGTGGTATTTCGGATCCGCCCAGGGCTCCCAGTTT
GTGGAGTGGGCCTCAGCAGGAAACCTCAAGCCGGTGTGGGTGAACAGAGGCTGCCCACGG
GCCTGGGATCAGGAGGCCGAGGGGGCAGGCCCAGAGCTGGGGCTGCGGGCAGCACGGACC
AAGGCCCTGTGGCTGCCCATGGGGGACTGATCACCCAAGCGCCATTCGGTTCCATCTGGG
ACAAATGAGATGGACCCCAACCGATGCCAGACGTCTGGAACTTTCCTTTTATTATGGTTC
CCGTGCCTTCCAATAAACTCTGACCAATCTACAAAATGCTTCTGAGGGGAGGAAGGGAGG
AAATAGCAGCTTCTGGTCTATTGAGGCCATTTCAGTCCTGAGCCTCCGCCACCCAGTGGG
CTGGCGCCCAGA
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
GGAATCCACGTTGTCTCTTTGATGGCGTGGGCTCGACTGGCCTCGAGGCTGGAGAGACAC
GGAGTGGAGCTCCAGGTGGCCAAGGCAGAGGTGGAGCTGAGCGTGAGGCGGCTTCGGGCA
TGGGGGGCCCGCGTCCAGGCCCAAGGCTGCACCCTACAGGTAGCAGAGCTGAGAGGCCCC
GTGCTTCGGCTGCGGGAGCCGCTGGGTGTGCTGGCTATTGTGTGCCCAGACGAGTGGCCC
CTGCTTGCCTTCGTGTCTCTGCTGGCTCCCGCCCTGGCCCACGGCAACACCGTGGTCTTG
GTGCCCAGTGGGGCCTGTCCCATCCCTGCCTTGGAGGTCTGCCAGGATATGGCTGCCCTG
TTGCCAGCGGGCCTGGTGAATGTGGTGACAGGAGACCCGGACCACCTGACCCGCTGCCTG
GCCTTGCACCAGGACATCCAGGCCCTGTGGTATTTCGGATCCGCCCAGGGCTCCCAGTTT
GTGGAGTGGGCCTCAGCAGGAAACCTCAAGCCGGTGTGGGTGAACAGAGGCTGCCCACGG
GCCTGGGATCAGGAGGCCGAGGGGGCAGGCCCAGAGCTGGGGCTGCGGGCAGCACGGACC
AAGGCCCTGTGGCTGCCCATGGGGGACTGATCACCCAAGCGCCATTCGGTTCCATCTGGG
ACAAATGAGATGGACCCCAACCGATGCCAGACGTCTGGAACTTTCCTTTTATTATGGTTC
CCGTGCCTTCCAATAAACTCTGACCAATCTACAAAATGCTTCTGAGGGGAGGAAGGGAGG
AAATAGCAGCTTCTGGTCTATTGAGGCCATTTCAGTCCTGAGCCTCCGCCACCCAGTGGG
CTGGCGCCCAGA
|
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gi|23272780|gb|AAH35641.1| |
Protein identifier
|
gi|23272780|gb|AAH35641.1| |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
152-368, gnl|bosTau2|chr18 (48609355-48609570) |
|
152-368, gnl|Hg17|chr19 (54663442-54663657) |
|
152-368, gnl|Mm7|chr7 (41319034-41318815) |
| |
|
465-848, gnl|bosTau2|chr18 (48610585-48610964) |
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465-848, gnl|canFam2|chr1 (109920180-109919769) |
|
465-848, gnl|echTel1|scaffold_229500 (3298-3700) |
|
465-848, gnl|hg17|chr19 (54665272-54665683) |
|
465-848, gnl|Hg17|chr19 (54665374-54665928) |
|
465-848, gnl|loxAfr1|scaffold_28094 (22330-21927) |
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465-848, gnl|mm7|chr7 (41317921-41317555) |
|
465-848, gnl|Mm7|chr7 (41317834-41317508) |
|
465-848, gnl|monDom2|scaffold_105 (4136881-4136441) |
|
465-848, gnl|oryCun1|scaffold_96793 (3695-3332) |
|
465-848, gnl|panTro1|chr20 (52026133-52026544) |
|
465-848, gnl|rn3|chr1 (95696180-95695820) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
152-368, gnl|bosTau2|chr18 (48609355-48609570) |
|
152-368, gnl|Hg17|chr19 (54663442-54663657) |
|
152-368, gnl|Mm7|chr7 (41319034-41318815) |
| |
|
465-848, gnl|bosTau2|chr18 (48610585-48610964) |
|
465-848, gnl|canFam2|chr1 (109920180-109919769) |
|
465-848, gnl|echTel1|scaffold_229500 (3298-3700) |
|
465-848, gnl|hg17|chr19 (54665272-54665683) |
|
465-848, gnl|Hg17|chr19 (54665374-54665928) |
|
465-848, gnl|loxAfr1|scaffold_28094 (22330-21927) |
|
465-848, gnl|mm7|chr7 (41317921-41317555) |
|
465-848, gnl|Mm7|chr7 (41317834-41317508) |
|
465-848, gnl|monDom2|scaffold_105 (4136881-4136441) |
|
465-848, gnl|oryCun1|scaffold_96793 (3695-3332) |
|
465-848, gnl|panTro1|chr20 (52026133-52026544) |
|
465-848, gnl|rn3|chr1 (95696180-95695820) |
|
fce (0.271592) |
|
fty (0.17584) |
|
ill (0.175593) |
|
nje (0.16592) |
|
eli (0.151814) |
|
eep (0.122564) |
|
cly (0.120642) |
|
fce (0.271592) |
|
fty (0.17584) |
|
ill (0.175593) |
|
nje (0.16592) |
|
eli (0.151814) |
|
eep (0.122564) |
|
cly (0.120642) |
