Non-Coding RNA Search

Ss1.1-Pig4-TMW8029L06.5

Sequence:


               
               GTGAGAGCCGAGTCCTTGGAGTTCCCATCGTGGCTCAGTGGTTAATGACCCCGACTAGCA
TCCATGAGGATGCAGGTTCAATCCCTGGCCTCGCTCACCGGGTTAAGGATCCGGCATTAT
GGTGACTGTGGTGTAGGCCGGCAGGTGTAGCTCCAATTGGACCCCTAGCCAGGGAACCTC
CATACGTGGTGCATGCGGCTCTAAAAAAGTGACAAAAGGACAAAAAAAGAGAACCAAGCC
CTTAACTGGGAAGAGTCCCTCGTGTTGCCTGCAGCCCGCACCCAGCCCCACTCCTAGGTG
ACCCACTGTGGCTCTGAAACCCTCTCTGCTCCATGGGGCGGGGGGTCCCTTCAAGGAGGC
GCTCAGCCATGCCAGCTCCCGTGAAGGCTGGGCCAGAGGCCCGGGGGTGGGCCGCGTACC
TCTAGATCTGCTGCCCTAGAGCACCCAGAGACGCGCTGGTCCAGAATCACTTCGGCAGGC
AGCCTCACGTGGAAGAAGGAACTTAATGTCAAGGTTACGAACGAGGTATTTTTTAAAAGA
TCAAAGTGGTGTGTGTCTGTGTGTCTGTGTCTGTCTGTCTGTCAGGGGCTTAGTGTCTGC
TCAAGCGCTAAGGACAAGTCACAGCTTCCACAGTAGCCGTGAGGTCCGAGCCGGCCACTC
AGAGGGTGCAAGTCAGGCTCTTTCTGCTTCGGCAGCTGAGTCGGGGCGAGCGCCACGGCG
CTGGGGCGCAGGGACAGCACGGTCACGGAGGGGAGGGCAGCCAGCAGGCCCCGGTGTCCC
TGCTCTGTGTCCCTGCTCGAGCATCATCAGGAGGGAGTTCCTGGGGCGGGGCCTGGGGCA
GCTCCCCGGGGCTCGGGGAGGGGAGGCACAGGCCTCGGCCTGGGATCCCTGCCTTCGGCA
CAGTCCGCAGCGGGACAGAGCCCACCTCGAGGGGACAGCCTCCCACTGCCCTGCTTACCG
GAGCCTGAGAGCCTGGGGTGGGAGGCAGGACGCAACGAAACCTTCAGCAGCTCGGCTGCA
GAGCCCAGGCCTGCCTTCCCCACCCTGGACCCGGCTCAGACGAAGGTCGCACAAAACAGT
GCCTGTGGTCCTGCTCAGAACAAACACTGCATTTAGTAAGTTCCTGAAGAAGAGACGCCC
CTAAGAGCCAGCAATGCCCAGGGCTCTTTGGTCTATAAACATTAACAAAGCCCTTCATTT
TACAGCATTTAAAAGCTTTTCCTTTTTGGTTCACTGAGTTTTTTTAAAGCTTAGGTGTGA
AAATGACTATGGAAATTATCTACGTTTACAGTTCGTTCAGACGTTTATTTAAGGTCGTTA
TACAGAGGACAACCTCGGTTCTTCAGAATATCAAGTATGTACGAAGTCTCTAGCTGTGAC
AGTGACAAGGGAACAGCTAAAAACCAAGGCAGTGAAACAAACATGATTTTCTTAAAATTA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GTGAGAGCCGAGTCCTTGGAGTTCCCATCGTGGCTCAGTGGTTAATGACCCCGACTAGCA
TCCATGAGGATGCAGGTTCAATCCCTGGCCTCGCTCACCGGGTTAAGGATCCGGCATTAT
GGTGACTGTGGTGTAGGCCGGCAGGTGTAGCTCCAATTGGACCCCTAGCCAGGGAACCTC
CATACGTGGTGCATGCGGCTCTAAAAAAGTGACAAAAGGACAAAAAAAGAGAACCAAGCC
CTTAACTGGGAAGAGTCCCTCGTGTTGCCTGCAGCCCGCACCCAGCCCCACTCCTAGGTG
ACCCACTGTGGCTCTGAAACCCTCTCTGCTCCATGGGGCGGGGGGTCCCTTCAAGGAGGC
GCTCAGCCATGCCAGCTCCCGTGAAGGCTGGGCCAGAGGCCCGGGGGTGGGCCGCGTACC
TCTAGATCTGCTGCCCTAGAGCACCCAGAGACGCGCTGGTCCAGAATCACTTCGGCAGGC
AGCCTCACGTGGAAGAAGGAACTTAATGTCAAGGTTACGAACGAGGTATTTTTTAAAAGA
TCAAAGTGGTGTGTGTCTGTGTGTCTGTGTCTGTCTGTCTGTCAGGGGCTTAGTGTCTGC
TCAAGCGCTAAGGACAAGTCACAGCTTCCACAGTAGCCGTGAGGTCCGAGCCGGCCACTC
AGAGGGTGCAAGTCAGGCTCTTTCTGCTTCGGCAGCTGAGTCGGGGCGAGCGCCACGGCG
CTGGGGCGCAGGGACAGCACGGTCACGGAGGGGAGGGCAGCCAGCAGGCCCCGGTGTCCC
TGCTCTGTGTCCCTGCTCGAGCATCATCAGGAGGGAGTTCCTGGGGCGGGGCCTGGGGCA
GCTCCCCGGGGCTCGGGGAGGGGAGGCACAGGCCTCGGCCTGGGATCCCTGCCTTCGGCA
CAGTCCGCAGCGGGACAGAGCCCACCTCGAGGGGACAGCCTCCCACTGCCCTGCTTACCG
GAGCCTGAGAGCCTGGGGTGGGAGGCAGGACGCAACGAAACCTTCAGCAGCTCGGCTGCA
GAGCCCAGGCCTGCCTTCCCCACCCTGGACCCGGCTCAGACGAAGGTCGCACAAAACAGT
GCCTGTGGTCCTGCTCAGAACAAACACTGCATTTAGTAAGTTCCTGAAGAAGAGACGCCC
CTAAGAGCCAGCAATGCCCAGGGCTCTTTGGTCTATAAACATTAACAAAGCCCTTCATTT
TACAGCATTTAAAAGCTTTTCCTTTTTGGTTCACTGAGTTTTTTTAAAGCTTAGGTGTGA
AAATGACTATGGAAATTATCTACGTTTACAGTTCGTTCAGACGTTTATTTAAGGTCGTTA
TACAGAGGACAACCTCGGTTCTTCAGAATATCAAGTATGTACGAAGTCTCTAGCTGTGAC
AGTGACAAGGGAACAGCTAAAAACCAAGGCAGTGAAACAAACATGATTTTCTTAAAATTA

Aligned organism(s): 2 entry(ies)

More info

Aligned organism(s): 2 entry(ies)

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               1047-1440, gnl|bosTau2|chr21 (46665055-46664646)
               

               
               1047-1440, gnl|Hg17|chr14 (101751334-101750929)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1047-1440, gnl|bosTau2|chr21 (46665055-46664646)
               

               
               1047-1440, gnl|Hg17|chr14 (101751334-101750929)

Expressed library(ies): 2 entry(ies)

More info

Expressed library(ies): 2 entry(ies)

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               cga (0.279096)
               

               
               isp (0.150376)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cga (0.279096)
               

               
               isp (0.150376)

	1047-1440, gnl\|bosTau2\|chr21 (46665055-46664646)
	1047-1440, gnl\|Hg17\|chr14 (101751334-101750929)