Non-Coding RNA Search

Ss1.1-Pig4-TMW8029O07.3

Sequence:


               
               TCAGATCGTAAATGATGGTTATGACATGTGTACATCAGTTTAGCTTTGAATGCATGAGAT
TGTTGTCTTGGCTTTATTAAATTTTTAAAATCATTTGACCTGCCAGAATAATACTTTGCT
CCTTAAACATTAAGCTTGTTAGGGGGATGTCAAGTGACTTTGGAAAGAACTCAAAGTGTA
GTGATACTTCTAATCCATAGGGGGCCTAGGAACTCGGTTTCCTGTAGTGATTTCTTATAG
GGATGGGTTATGATAGAATATAGTTGTCCTATTTTAGATTAACCTCAGGAGTCAGGGATG
GAGTCTAAAATCTAATTGTAAGGCTCGTTATAGATTTCTTACACATTAATTTACCTGACA
ACTTAAATGTTATGTTATTCTACCTTTTGCAGTAATGAATTCCAAAATTTCCTTATATAC
TCTAGAGTGAAGAAATGGTTTTTTCCCCCTTTCAAAATTCATCTGTGTTAAAATGTTAAA
ATAACTACTTGCTTATATATTTATTTCTTTCATCTTCATTCATATGTATGGTACCTGCAT
TTGCCCATATCAACTTCATCTTTCTGATTGTCCTGCTGTTTTATGACTTTGAAGTTTATT
TGTAAAATGGAACATAGATTTTAGAATGTTAGAGGTAAAAGAAACTTTAGAGGTCATATA
GTCCATTCTTGCATTTTACAGATTGGAAAACTGAATTTTTCTTGATGTTCAAGGCATACT
AATGTTTGTAAACTATACTGTAGTTTCATTCTGGTTCAGTAGCAAGCCCCTTTATGCCTC
TCAAATCAGGATAGGTAAATTCCAGATAAAAATCTGATGCAAAATAGGAAAAGTTTTATC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TCAGATCGTAAATGATGGTTATGACATGTGTACATCAGTTTAGCTTTGAATGCATGAGAT
TGTTGTCTTGGCTTTATTAAATTTTTAAAATCATTTGACCTGCCAGAATAATACTTTGCT
CCTTAAACATTAAGCTTGTTAGGGGGATGTCAAGTGACTTTGGAAAGAACTCAAAGTGTA
GTGATACTTCTAATCCATAGGGGGCCTAGGAACTCGGTTTCCTGTAGTGATTTCTTATAG
GGATGGGTTATGATAGAATATAGTTGTCCTATTTTAGATTAACCTCAGGAGTCAGGGATG
GAGTCTAAAATCTAATTGTAAGGCTCGTTATAGATTTCTTACACATTAATTTACCTGACA
ACTTAAATGTTATGTTATTCTACCTTTTGCAGTAATGAATTCCAAAATTTCCTTATATAC
TCTAGAGTGAAGAAATGGTTTTTTCCCCCTTTCAAAATTCATCTGTGTTAAAATGTTAAA
ATAACTACTTGCTTATATATTTATTTCTTTCATCTTCATTCATATGTATGGTACCTGCAT
TTGCCCATATCAACTTCATCTTTCTGATTGTCCTGCTGTTTTATGACTTTGAAGTTTATT
TGTAAAATGGAACATAGATTTTAGAATGTTAGAGGTAAAAGAAACTTTAGAGGTCATATA
GTCCATTCTTGCATTTTACAGATTGGAAAACTGAATTTTTCTTGATGTTCAAGGCATACT
AATGTTTGTAAACTATACTGTAGTTTCATTCTGGTTCAGTAGCAAGCCCCTTTATGCCTC
TCAAATCAGGATAGGTAAATTCCAGATAAAAATCTGATGCAAAATAGGAAAAGTTTTATC

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

Help | Less info


               
               5-784, gnl|bosTau2|chr2 (4095450-4094672)
               

               
               5-784, gnl|Hg17|chr2 (190266703-190265913)
               

               
               5-784, gnl|Mm7|chr1 (46158867-46158165)

Aligned organism(s): 3 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               5-784, gnl|bosTau2|chr2 (4095450-4094672)
               

               
               5-784, gnl|Hg17|chr2 (190266703-190265913)
               

               
               5-784, gnl|Mm7|chr1 (46158867-46158165)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

Help | Less info


               
               thg (0.126791)

Expressed library(ies): 1 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               thg (0.126791)

	5-784, gnl\|bosTau2\|chr2 (4095450-4094672)
	5-784, gnl\|Hg17\|chr2 (190266703-190265913)
	5-784, gnl\|Mm7\|chr1 (46158867-46158165)