Non-Coding RNA Search

Ss1.1-Pig4-TMW8030A15.5

Sequence:


               
               GTTGCCATCCTTATTTAATTCCGTGGTCCCTGTAGTTTCCACCTGCAGAGTCATCCCTTT
CTGTTAAGATGCTGTCACTAGAGAGCACATGTGAAAATACCCATACTTGATCAGATTAAC
CAGCTATTGCTTTGGAAAACTGTTGAGGAACTTGGGACTAAAGTAGGCTTTAATGGGGGA
CAGGAACGGTCTGCATAGGATTTGCAAACTTAAATATCTACTGGGACCAGGAAATTAATG
CAAATCAGTGAAACTAGCCTGGTGTAAGACAATGGCGAGTGATAAGAAATGTGGCGAACT
GGAGTGTCGGTGCTGTAACTGAAGGGAGCAGCTGTTCAGCTGTAGCAGATTGTTGCCCTG
AGGAATGTGGATCCAGTGTTCTGAGATATTCTGTACTTTTTTTGCCCCAAGAGAAACCCT
AAAGTAGGATTTTTGTATGAAATCTGTCAGTTTTTAAATCCATATTTCCAAACCCTGCAG
GCCAACTAAGAACATCCCAGGGTAGATGTGGCCAGCATGCGATCAATTTGTAATCTCAAA
CCTGGTCAGAGGTTTTATAGCTCAGGAGCAGTAGAAGCTCTTGTTCTTTGCAGTGAACAC
AGAACAGAAGGTCTTTGGATGCCATGGATAAGGGTAAAAAATGTTAAAAGCAAACTCAGT
GCATGATAACTTTGTCAAATGACTGTTGCCTCTCCATGCGAGCGATTATGAAAGACCTTT
GCCACTACTCCCTAAAATACTGAGGCAAATCTTGAAATCCTGCCTTCCTCTTTACTCCCC
AAATTATACCAGCAGGAAAGTTAATAACAAATGTTTAGGTTATACAAATTGAAGCTGTGG
CTGTTATTTTGTATATAATAAAGTGCGAAAAAAAGATACCTTAAGGTTATGATGAGTAGC
TTTACTGTTTCTGCCTTCAAATATTTTGACCTAATACTGTTTAAAATAAAAAATTTTGGA
GTTCCAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GTTGCCATCCTTATTTAATTCCGTGGTCCCTGTAGTTTCCACCTGCAGAGTCATCCCTTT
CTGTTAAGATGCTGTCACTAGAGAGCACATGTGAAAATACCCATACTTGATCAGATTAAC
CAGCTATTGCTTTGGAAAACTGTTGAGGAACTTGGGACTAAAGTAGGCTTTAATGGGGGA
CAGGAACGGTCTGCATAGGATTTGCAAACTTAAATATCTACTGGGACCAGGAAATTAATG
CAAATCAGTGAAACTAGCCTGGTGTAAGACAATGGCGAGTGATAAGAAATGTGGCGAACT
GGAGTGTCGGTGCTGTAACTGAAGGGAGCAGCTGTTCAGCTGTAGCAGATTGTTGCCCTG
AGGAATGTGGATCCAGTGTTCTGAGATATTCTGTACTTTTTTTGCCCCAAGAGAAACCCT
AAAGTAGGATTTTTGTATGAAATCTGTCAGTTTTTAAATCCATATTTCCAAACCCTGCAG
GCCAACTAAGAACATCCCAGGGTAGATGTGGCCAGCATGCGATCAATTTGTAATCTCAAA
CCTGGTCAGAGGTTTTATAGCTCAGGAGCAGTAGAAGCTCTTGTTCTTTGCAGTGAACAC
AGAACAGAAGGTCTTTGGATGCCATGGATAAGGGTAAAAAATGTTAAAAGCAAACTCAGT
GCATGATAACTTTGTCAAATGACTGTTGCCTCTCCATGCGAGCGATTATGAAAGACCTTT
GCCACTACTCCCTAAAATACTGAGGCAAATCTTGAAATCCTGCCTTCCTCTTTACTCCCC
AAATTATACCAGCAGGAAAGTTAATAACAAATGTTTAGGTTATACAAATTGAAGCTGTGG
CTGTTATTTTGTATATAATAAAGTGCGAAAAAAAGATACCTTAAGGTTATGATGAGTAGC
TTTACTGTTTCTGCCTTCAAATATTTTGACCTAATACTGTTTAAAATAAAAAATTTTGGA
GTTCCAAAAAAA

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               1-946, gnl|bosTau2|chr1 (30389104-30390070)
               

               
               1-946, gnl|Mm7|chr16 (37794806-37793911)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-946, gnl|bosTau2|chr1 (30389104-30390070)
               

               
               1-946, gnl|Mm7|chr16 (37794806-37793911)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               sug (0.127291)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               sug (0.127291)

	1-946, gnl\|bosTau2\|chr1 (30389104-30390070)
	1-946, gnl\|Mm7\|chr16 (37794806-37793911)