Non-Coding RNA Search

Ss1.1-Pig4-TMW8030A17.3

Sequence:


               
               TATAGGCAAACCCTCCATTTGCTGTGGTTTAAACATACAGCTTAATGGGCAAGGAGACCA
TTTGCTTTTTCTGGGGCAGTGGAACAAGAAAGAATACTATGTATCTTAGAACTACCCTGG
TTGTGATGTTGTATTAATGAATTATCACTAGAGAAGTTTCATAGCTTATCAATATATCTG
GTTTAGTATATGTGTGTATCTGTATACACACAAATTTATCAACATATAAATACGGTTGCA
AAGACAAGAGGAAGATTTTATGACTTCAGTATAGACTGTGTATAAATAACCTTGTCCTTA
TATAAGGTTTTGTTTGTTTTTATTATTTTGAGCAAAATGCTAAGCTATTCTGTGTATGAT
GATAACAGTTTGTGTTTAAATTTAAGAAATCTAGCTCTTTATTTAACATCAAAGCCAACA
TCATGTTTAATTTTTTTAAAATGACACCTACTTTGAATTCAGTAAAGATCTATAGAGAAT
TTATATAACTTTAGGCTGGCATGAAACTATATAATATCCCACAAAATGGAAATCCTACAA
CAGAACTCCCAATAAACATTTTGTTTATATATGAGATGCTTCAATAACTAGGGTCCCACA
CTTATCGTGACACCTAAAGATGTGGCCAAGGAAACCTATTTAGGCTGGGTTTCACTGCCA
ACGTGGTTCTTTTTCCAGTTTATTTAATAAAAAATGCTTTTCATAAGAGCATGGAAAGTT
TGCTTACCCAGTTTGGACTTTCACAGAAAACAAGAGGAGGGGAAGACCTTCAAAAATACT
TCTGTTAAAATTTGATATAGTAGAGACCCTTACAAAAGAAGTCAAATTCAGGACTCTGAT
TTCTAAGCCTGCACTCTATTTAAATGCTGATGCTGGTTTATAGAATGCAAAATACATATT
ACAACCATGTGCAAACTAATGTTCAGACTCAAATTTCATTATGTGCAATAAAAATGGTAA
GTGATGGTTATGCAAGGGGTAGAATCATCCTTTCCTGTCTAATTACACCAATTCACATTG
GCATTACTTTAGCACTTTTATGTATAAAGTAGGCCAGTTGTTTATGAATGATTGTGGCCA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TATAGGCAAACCCTCCATTTGCTGTGGTTTAAACATACAGCTTAATGGGCAAGGAGACCA
TTTGCTTTTTCTGGGGCAGTGGAACAAGAAAGAATACTATGTATCTTAGAACTACCCTGG
TTGTGATGTTGTATTAATGAATTATCACTAGAGAAGTTTCATAGCTTATCAATATATCTG
GTTTAGTATATGTGTGTATCTGTATACACACAAATTTATCAACATATAAATACGGTTGCA
AAGACAAGAGGAAGATTTTATGACTTCAGTATAGACTGTGTATAAATAACCTTGTCCTTA
TATAAGGTTTTGTTTGTTTTTATTATTTTGAGCAAAATGCTAAGCTATTCTGTGTATGAT
GATAACAGTTTGTGTTTAAATTTAAGAAATCTAGCTCTTTATTTAACATCAAAGCCAACA
TCATGTTTAATTTTTTTAAAATGACACCTACTTTGAATTCAGTAAAGATCTATAGAGAAT
TTATATAACTTTAGGCTGGCATGAAACTATATAATATCCCACAAAATGGAAATCCTACAA
CAGAACTCCCAATAAACATTTTGTTTATATATGAGATGCTTCAATAACTAGGGTCCCACA
CTTATCGTGACACCTAAAGATGTGGCCAAGGAAACCTATTTAGGCTGGGTTTCACTGCCA
ACGTGGTTCTTTTTCCAGTTTATTTAATAAAAAATGCTTTTCATAAGAGCATGGAAAGTT
TGCTTACCCAGTTTGGACTTTCACAGAAAACAAGAGGAGGGGAAGACCTTCAAAAATACT
TCTGTTAAAATTTGATATAGTAGAGACCCTTACAAAAGAAGTCAAATTCAGGACTCTGAT
TTCTAAGCCTGCACTCTATTTAAATGCTGATGCTGGTTTATAGAATGCAAAATACATATT
ACAACCATGTGCAAACTAATGTTCAGACTCAAATTTCATTATGTGCAATAAAAATGGTAA
GTGATGGTTATGCAAGGGGTAGAATCATCCTTTCCTGTCTAATTACACCAATTCACATTG
GCATTACTTTAGCACTTTTATGTATAAAGTAGGCCAGTTGTTTATGAATGATTGTGGCCA

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

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               3-561, gnl|bosTau2|chr28 (22911440-22911983)
               


               
               686-1077, gnl|bosTau2|chr28 (22912570-22912952)
               

               
               686-1077, gnl|Hg17|chr10 (75208532-75209632)

Aligned organism(s): 3 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               3-561, gnl|bosTau2|chr28 (22911440-22911983)
               


               
               686-1077, gnl|bosTau2|chr28 (22912570-22912952)
               

               
               686-1077, gnl|Hg17|chr10 (75208532-75209632)

Expressed library(ies): 3 entry(ies)

More info

Expressed library(ies): 3 entry(ies)

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               fhi (0.339155)
               

               
               nlu (0.191681)
               

               
               tbr (0.154178)

Expressed library(ies): 3 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               fhi (0.339155)
               

               
               nlu (0.191681)
               

               
               tbr (0.154178)

	3-561, gnl\|bosTau2\|chr28 (22911440-22911983)

	686-1077, gnl\|bosTau2\|chr28 (22912570-22912952)
	686-1077, gnl\|Hg17\|chr10 (75208532-75209632)