Ss1.1-Pig4-TMW8030B05.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GCCCCCTACCTGGATCTGCTGAACCACAGCCCCGCCGTCCAGGTGAAAGCCGCGTTCAAT GAGGAAAGCCGTTGTTACGAAATTAGGACGGCTACAAGCTGTAGAAAACACGAAGAGGTA TTCATCTGCTACGGCCCTCACGGTAGCCACCGTCTGCTCCTGGAGTACGGATTTGTCTCC CCCCGTAATCCACACGCTTGTGTTTATGTCCCAAAAGATATACTTGTGAAATATCTTCCA TCGACAGATAAACAGATGAACAAAAAGATTTCCATTTTAAAGGATCATGACTTTATAGAA AATCTGACATTTGGATGGGATGGACCGTCCTGGCGGCTACTCACAGCTCTGAAGTTGTTA TGTCTGGGAGCTGAAGATTTCACCTGTTGGAAAAAAGTACTTCTTGGGGAAGTAATTTCA GATGCACATGAAAAGACAAGTTTGGACATAGCCCAGAAAATATGCCATTATTTCATAGAG GAGACTAATGCTACGCTTCAGAAGATCTCTCATATGAAAGATGAAGACGTGGCTTTGATA AACCAACTAACTTTGGTAGAAACACTGCGGACAGAAGAGCTGAAGATTCTCCAGGCCTCG ACTGAGATCCTAGCTGGTTTGCAAACAGCTTTTATGTAACTTCAGTGTGTGTGATCACCT CCTGTGGTGGGTGTCCCTTCTTAAACATTTTTAAACTAAGGTTTATTTTATATAGAATCA TTAACACTCAGTGATTGGTTTCTATTAAACAATTAT |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GCCCCCTACCTGGATCTGCTGAACCACAGCCCCGCCGTCCAGGTGAAAGCCGCGTTCAAT GAGGAAAGCCGTTGTTACGAAATTAGGACGGCTACAAGCTGTAGAAAACACGAAGAGGTA TTCATCTGCTACGGCCCTCACGGTAGCCACCGTCTGCTCCTGGAGTACGGATTTGTCTCC CCCCGTAATCCACACGCTTGTGTTTATGTCCCAAAAGATATACTTGTGAAATATCTTCCA TCGACAGATAAACAGATGAACAAAAAGATTTCCATTTTAAAGGATCATGACTTTATAGAA AATCTGACATTTGGATGGGATGGACCGTCCTGGCGGCTACTCACAGCTCTGAAGTTGTTA TGTCTGGGAGCTGAAGATTTCACCTGTTGGAAAAAAGTACTTCTTGGGGAAGTAATTTCA GATGCACATGAAAAGACAAGTTTGGACATAGCCCAGAAAATATGCCATTATTTCATAGAG GAGACTAATGCTACGCTTCAGAAGATCTCTCATATGAAAGATGAAGACGTGGCTTTGATA AACCAACTAACTTTGGTAGAAACACTGCGGACAGAAGAGCTGAAGATTCTCCAGGCCTCG ACTGAGATCCTAGCTGGTTTGCAAACAGCTTTTATGTAACTTCAGTGTGTGTGATCACCT CCTGTGGTGGGTGTCCCTTCTTAAACATTTTTAAACTAAGGTTTATTTTATATAGAATCA TTAACACTCAGTGATTGGTTTCTATTAAACAATTAT |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 20 entry(ies) | More info |
| Aligned organism(s): 20 entry(ies) | Help | Less info |
| 38-217, gnl|bosTau2|chr1 (96123481-96123302) | |
| 38-217, gnl|canFam2|chr31 (33409389-33409603) | |
| 38-217, gnl|danRer3|chr1 (47536863-47537045) | |
| 38-217, gnl|dasNov1|scaffold_146255 (718-517) | |
| 38-217, gnl|echTel1|scaffold_286436 (62429-62640) | |
| 38-217, gnl|fr1|chrUn (195231841-195232053) | |
| 38-217, gnl|galGal2|chr1 (100289877-100290092) | |
| 38-217, gnl|hg17|chr21 (36337948-36338160) | |
| 38-217, gnl|Hg17|chr21 (36338129-36337950) | |
| 38-217, gnl|loxAfr1|scaffold_9400 (26636-26422) | |
| 38-217, gnl|mm7|chr16 (93648944-93649157) | |
| 38-217, gnl|Mm7|chr16 (93649125-93648946) | |
| 38-217, gnl|monDom2|scaffold_29 (11228499-11228287) | |
| 38-217, gnl|panTro1|chr22 (36336116-36336329) | |
| 38-217, gnl|rheMac2|chr3 (10528722-10528509) | |
| 38-217, gnl|rn3|chr11 (33828090-33828302) | |
| 38-217, gnl|xenTro1|scaffold_497 (218463-218250) | |
| 503-746, gnl|bosTau2|chr1 (96116298-96116045) | |
| 503-746, gnl|Hg17|chr21 (36330421-36330173) | |
| 503-746, gnl|Mm7|chr16 (93642719-93642488) |
| Aligned organism(s): 20 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 38-217, gnl|bosTau2|chr1 (96123481-96123302) | |
| 38-217, gnl|canFam2|chr31 (33409389-33409603) | |
| 38-217, gnl|danRer3|chr1 (47536863-47537045) | |
| 38-217, gnl|dasNov1|scaffold_146255 (718-517) | |
| 38-217, gnl|echTel1|scaffold_286436 (62429-62640) | |
| 38-217, gnl|fr1|chrUn (195231841-195232053) | |
| 38-217, gnl|galGal2|chr1 (100289877-100290092) | |
| 38-217, gnl|hg17|chr21 (36337948-36338160) | |
| 38-217, gnl|Hg17|chr21 (36338129-36337950) | |
| 38-217, gnl|loxAfr1|scaffold_9400 (26636-26422) | |
| 38-217, gnl|mm7|chr16 (93648944-93649157) | |
| 38-217, gnl|Mm7|chr16 (93649125-93648946) | |
| 38-217, gnl|monDom2|scaffold_29 (11228499-11228287) | |
| 38-217, gnl|panTro1|chr22 (36336116-36336329) | |
| 38-217, gnl|rheMac2|chr3 (10528722-10528509) | |
| 38-217, gnl|rn3|chr11 (33828090-33828302) | |
| 38-217, gnl|xenTro1|scaffold_497 (218463-218250) | |
| 503-746, gnl|bosTau2|chr1 (96116298-96116045) | |
| 503-746, gnl|Hg17|chr21 (36330421-36330173) | |
| 503-746, gnl|Mm7|chr16 (93642719-93642488) |
| Expressed library(ies): 6 entry(ies) | More info |
| Expressed library(ies): 6 entry(ies) | Help | Less info |
| ski (0.146735) | |
| csk (0.140746) | |
| hlv (0.139256) | |
| sug (0.127291) | |
| bla (0.124347) | |
| spc (0.113366) |
| Expressed library(ies): 6 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| ski (0.146735) | |
| csk (0.140746) | |
| hlv (0.139256) | |
| sug (0.127291) | |
| bla (0.124347) | |
| spc (0.113366) |