Ss1.1-Pig4-TMW8030F15.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| TCTCGCTCCCCTCGGCGGTGCAGCTCAGTGCGGCCGGCCTCACCTCCGCGGGACATGCCG GCGCTGCTCTCGCCGCGCGCCCGGGACTGCTAGCTTCTCCCGCGCTTCCTGCGCGCTCGG CCCCGCACCTGGTGGTGGCCCCGGAGCCCGGCTTGGGCTGTGCGCTCGGCGAGCGGGCGA TCGGGCGGCTGGCTGTGCGCGCGGACCGCCGCCGTCATGGGGCTGCAGCCTTTGGAGTTC AGCGACTGCTACCTCGACAGCCCGTGGTTCCGGGAGAGGATCCGCGCCCACGAAGCAGAG CTGGAGAGGACCAACAAGTTCATCAAAGAGCTCATCAAGGACGGGAAGAACCTCATCGCG GCGACCAAAAATCTTTCGGCAGCCCAGCGGAAGTTTGCTCATTCACTCAGAGACTTCAAA TTTGAGTTTATTGGTGATGCAGAGACTGATGATGAACGCTGCATAGATGCTTCCTTACGG GAATTTTCAAACTTTTTGAAGAATCTGGAAGAACAAAGAGAAATTATGGCATTAAGTGTA ACCGAGACCCTGATTAAACCCTTGGAAAAATTCAGGAAAGAGCAACTTGGAGCCGTAAAG GAAGAAAAAAAGAAGTTTGACAAAGAGACGGAAAAGAACTATAGCCTAATTGATAAACAT TTGAATTTATCAGCGAAAAAGAAAGACTCCCATTTACAAGAGGCAGATATCCAAGTGGAA CAGAACCGGCAA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| TCTCGCTCCCCTCGGCGGTGCAGCTCAGTGCGGCCGGCCTCACCTCCGCGGGACATGCCG GCGCTGCTCTCGCCGCGCGCCCGGGACTGCTAGCTTCTCCCGCGCTTCCTGCGCGCTCGG CCCCGCACCTGGTGGTGGCCCCGGAGCCCGGCTTGGGCTGTGCGCTCGGCGAGCGGGCGA TCGGGCGGCTGGCTGTGCGCGCGGACCGCCGCCGTCATGGGGCTGCAGCCTTTGGAGTTC AGCGACTGCTACCTCGACAGCCCGTGGTTCCGGGAGAGGATCCGCGCCCACGAAGCAGAG CTGGAGAGGACCAACAAGTTCATCAAAGAGCTCATCAAGGACGGGAAGAACCTCATCGCG GCGACCAAAAATCTTTCGGCAGCCCAGCGGAAGTTTGCTCATTCACTCAGAGACTTCAAA TTTGAGTTTATTGGTGATGCAGAGACTGATGATGAACGCTGCATAGATGCTTCCTTACGG GAATTTTCAAACTTTTTGAAGAATCTGGAAGAACAAAGAGAAATTATGGCATTAAGTGTA ACCGAGACCCTGATTAAACCCTTGGAAAAATTCAGGAAAGAGCAACTTGGAGCCGTAAAG GAAGAAAAAAAGAAGTTTGACAAAGAGACGGAAAAGAACTATAGCCTAATTGATAAACAT TTGAATTTATCAGCGAAAAAGAAAGACTCCCATTTACAAGAGGCAGATATCCAAGTGGAA CAGAACCGGCAA |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 22 entry(ies) | More info |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
| 1-169, gnl|bosTau2|chr17 (5661906-5662068) | |
| 1-169, gnl|Hg17|chr4 (149010857-149011026) | |
| 191-370, gnl|bosTau2|chr17 (5662055-5662234) | |
| 191-370, gnl|Hg17|chr4 (149011012-149011211) | |
| 191-370, gnl|Mm7|chr8 (76061451-76061270) | |
| 599-703, gnl|bosTau2|chr17 (5813751-5813855) | |
| 599-703, gnl|canFam2|chr15 (49201384-49201515) | |
| 599-703, gnl|danRer3|chr1 (44243415-44243294) | |
| 599-703, gnl|dasNov1|scaffold_25534 (6372-6501) | |
| 599-703, gnl|echTel1|scaffold_314582 (123886-123760) | |
| 599-703, gnl|fr1|chrUn (274822297-274822175) | |
| 599-703, gnl|hg17|chr4 (149136292-149136414) | |
| 599-703, gnl|Hg17|chr4 (149136307-149136411) | |
| 599-703, gnl|loxAfr1|scaffold_94330 (165-294) | |
| 599-703, gnl|mm7|chr8 (75970096-75969971) | |
| 599-703, gnl|Mm7|chr8 (75970076-75969972) | |
| 599-703, gnl|oryCun1|scaffold_140039 (25652-25780) | |
| 599-703, gnl|panTro1|chr3 (166407397-166407518) | |
| 599-703, gnl|rheMac2|chr5 (140077359-140077486) | |
| 599-703, gnl|rn3|chr19 (32357866-32357991) | |
| 599-703, gnl|tetNig1|chr18 (7162207-7162328) | |
| 599-703, gnl|xenTro1|scaffold_512 (55760-55880) |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-169, gnl|bosTau2|chr17 (5661906-5662068) | |
| 1-169, gnl|Hg17|chr4 (149010857-149011026) | |
| 191-370, gnl|bosTau2|chr17 (5662055-5662234) | |
| 191-370, gnl|Hg17|chr4 (149011012-149011211) | |
| 191-370, gnl|Mm7|chr8 (76061451-76061270) | |
| 599-703, gnl|bosTau2|chr17 (5813751-5813855) | |
| 599-703, gnl|canFam2|chr15 (49201384-49201515) | |
| 599-703, gnl|danRer3|chr1 (44243415-44243294) | |
| 599-703, gnl|dasNov1|scaffold_25534 (6372-6501) | |
| 599-703, gnl|echTel1|scaffold_314582 (123886-123760) | |
| 599-703, gnl|fr1|chrUn (274822297-274822175) | |
| 599-703, gnl|hg17|chr4 (149136292-149136414) | |
| 599-703, gnl|Hg17|chr4 (149136307-149136411) | |
| 599-703, gnl|loxAfr1|scaffold_94330 (165-294) | |
| 599-703, gnl|mm7|chr8 (75970096-75969971) | |
| 599-703, gnl|Mm7|chr8 (75970076-75969972) | |
| 599-703, gnl|oryCun1|scaffold_140039 (25652-25780) | |
| 599-703, gnl|panTro1|chr3 (166407397-166407518) | |
| 599-703, gnl|rheMac2|chr5 (140077359-140077486) | |
| 599-703, gnl|rn3|chr19 (32357866-32357991) | |
| 599-703, gnl|tetNig1|chr18 (7162207-7162328) | |
| 599-703, gnl|xenTro1|scaffold_512 (55760-55880) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| cje (0.330469) |