Ss1.1-Pig4-TMW8030G06.5
|
GCAGGGGTCGAGCTGAAGATCATGCTGTCACCAGAAGCAAGGAATACCGCGTGGGTGTCC
TTCGAGGGGCGAAAGAGACAGGAGATCCGCCACGGAGACAGCATCAGCATCACCACCTCC
TGCTACCCGCTCCCCTCCGTCTGCGTCCGAGACCCCGTGAGCGACTGGTTTGAGAGCCTG
GCACAGTGTCTGCACTGGAACCTGCGGAAGAGGCAGGCCCACTTCCCGGAGGACGAGGGG
GGCGACGAGGCGGGGGACGGGGACGAGGAGGGCGGCTCGGGGAGCTAGGCCTGTTGGCCC
AAACGCACACTGTGAGTCTCACAGGCCCAGCGCAGGTGGCAGGCGCCGCGTCAGTCTGTG
GCCAGAGGGAGGGCCTGAAATTGGCTTTTTTGTCGACCAGATCAGCTCTTTTTAACGTTT
CAAATCTGAGTTTTTTCTGCATTTCTAAACAAGCGAGCGTGATGGCTGGGAGCTTGGAGG
CCAACTCGGGCACAGCCACCCAGCATCTCCGGAGCCCAGGCCCGGCAGGGTCCCCAGCTT
AATGAGCTCTTTAATTCCCCATCTGGAAACCTCCGTGAATCAGTTGATTGACGCTGGGAG
GGGGGAGCAGCGTGGACAGAGCTATCCTTTGCTATTGAAAAATAAACATCTCACCGCAAA
AATCTTCCTTCAGCCACCACCACCTTCCCCTGATGCCACTTGGGACACTTCTGCCAAGAG
CAGGCGGCATTTGGTTGGCAGGCAGACGGGTCCCCTCCCGCTCCGGCTCAGGGTCGGCCT
GAGTTGCCTGGTTGCTCCTGCCTTGGTTCCAAAGCCCTGGTCCCCTCACCCCCCGCCCCC
TGCCGTCGGAGCACCAGCCCGGCCACGGCGGGGTCGGGGGGTCGACTCTACACATTCCTC
GTGGAGCAGGTGTTTCAATCCCGAGTCTCCTTTGTAGAGATTGTCGCACTTCCTCAAAGT
GCTGCCTGCAGACCGCGGCGCACACTGTGAGCTTTCGGGGCGGGGCCGGGTCGCGTCCCA
CTCAGAGCCTCATTCCAGTGTTCGCCCCATGTCCTGTGCTCCGGGACCACTCTGCAGCCC
CCGCGGCTGACGGACCCGTGCACCGGGGGGCCCCACGGTTGTGACGGGGTGGGGATGTCG
CATGTCAACACGGCTCTGCTCCCTGTGGGCTCGGGAGGGACCCTCACATTCAGCCCTCGT
GCGCCATCACCAGCTGCCGGATGCCAGAGCTGTGTGGCACCTGGTGGGAGCCTGGCCCCG
ATCCGCTGGGCATCTTGAACGTGGCGTCTGTGTCTGAGAACTGCTTTCTCTCAATCGCGT
TTCTTGCGGAAGCAGAACGGACGGGTGCCTGTCCTTTCTTGGACCTGCTTCTGGAATGAC
GGGCCGGGGGGCTGTGCTTTGCCCACCTGGGGGTTCGCAGGCTGAGAAAAAGGCACCTGG
GGCACACGTGTGGCCACTGTGGCCGGAGGTCTCCGGAGCTGGCTCTGCAGCCTGGGCGCC
GTGGCCGCTGTCTGCCTCCATTGCACCTGCCTGGGCGCCCGGCCACGCTGGGAGGGGATC
GCTTCGCGCCACCTGCCTGCAAGCCCCCGGCACAGCCAGTGGCCTGAGGGAGCCCCACTG
GCAGCGTTAGGCTCGGCACTCAGGTCACTCATTCAGACAGCCCGTGTTGACCAAGTCCTA
AAGCATGACGCACAGTGACCTGCGGAACTTTGGGTTTTTTGAAGTAAATTCTTAATGTTT
CATATTGTTAATAACTGGGAAATTTGTTAAATGTTGAAAGCCTTATTACTATTTTCGGAT
CCTTTCAATAAACAGACTTGTTTTAAAAAAAAAAAA
|
Blue-coloured subsequences are predicted RNA structures by RNAz
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GCAGGGGTCGAGCTGAAGATCATGCTGTCACCAGAAGCAAGGAATACCGCGTGGGTGTCC
TTCGAGGGGCGAAAGAGACAGGAGATCCGCCACGGAGACAGCATCAGCATCACCACCTCC
TGCTACCCGCTCCCCTCCGTCTGCGTCCGAGACCCCGTGAGCGACTGGTTTGAGAGCCTG
GCACAGTGTCTGCACTGGAACCTGCGGAAGAGGCAGGCCCACTTCCCGGAGGACGAGGGG
GGCGACGAGGCGGGGGACGGGGACGAGGAGGGCGGCTCGGGGAGCTAGGCCTGTTGGCCC
AAACGCACACTGTGAGTCTCACAGGCCCAGCGCAGGTGGCAGGCGCCGCGTCAGTCTGTG
GCCAGAGGGAGGGCCTGAAATTGGCTTTTTTGTCGACCAGATCAGCTCTTTTTAACGTTT
CAAATCTGAGTTTTTTCTGCATTTCTAAACAAGCGAGCGTGATGGCTGGGAGCTTGGAGG
CCAACTCGGGCACAGCCACCCAGCATCTCCGGAGCCCAGGCCCGGCAGGGTCCCCAGCTT
AATGAGCTCTTTAATTCCCCATCTGGAAACCTCCGTGAATCAGTTGATTGACGCTGGGAG
GGGGGAGCAGCGTGGACAGAGCTATCCTTTGCTATTGAAAAATAAACATCTCACCGCAAA
AATCTTCCTTCAGCCACCACCACCTTCCCCTGATGCCACTTGGGACACTTCTGCCAAGAG
CAGGCGGCATTTGGTTGGCAGGCAGACGGGTCCCCTCCCGCTCCGGCTCAGGGTCGGCCT
GAGTTGCCTGGTTGCTCCTGCCTTGGTTCCAAAGCCCTGGTCCCCTCACCCCCCGCCCCC
TGCCGTCGGAGCACCAGCCCGGCCACGGCGGGGTCGGGGGGTCGACTCTACACATTCCTC
GTGGAGCAGGTGTTTCAATCCCGAGTCTCCTTTGTAGAGATTGTCGCACTTCCTCAAAGT
GCTGCCTGCAGACCGCGGCGCACACTGTGAGCTTTCGGGGCGGGGCCGGGTCGCGTCCCA
CTCAGAGCCTCATTCCAGTGTTCGCCCCATGTCCTGTGCTCCGGGACCACTCTGCAGCCC
CCGCGGCTGACGGACCCGTGCACCGGGGGGCCCCACGGTTGTGACGGGGTGGGGATGTCG
CATGTCAACACGGCTCTGCTCCCTGTGGGCTCGGGAGGGACCCTCACATTCAGCCCTCGT
GCGCCATCACCAGCTGCCGGATGCCAGAGCTGTGTGGCACCTGGTGGGAGCCTGGCCCCG
ATCCGCTGGGCATCTTGAACGTGGCGTCTGTGTCTGAGAACTGCTTTCTCTCAATCGCGT
TTCTTGCGGAAGCAGAACGGACGGGTGCCTGTCCTTTCTTGGACCTGCTTCTGGAATGAC
GGGCCGGGGGGCTGTGCTTTGCCCACCTGGGGGTTCGCAGGCTGAGAAAAAGGCACCTGG
GGCACACGTGTGGCCACTGTGGCCGGAGGTCTCCGGAGCTGGCTCTGCAGCCTGGGCGCC
GTGGCCGCTGTCTGCCTCCATTGCACCTGCCTGGGCGCCCGGCCACGCTGGGAGGGGATC
GCTTCGCGCCACCTGCCTGCAAGCCCCCGGCACAGCCAGTGGCCTGAGGGAGCCCCACTG
GCAGCGTTAGGCTCGGCACTCAGGTCACTCATTCAGACAGCCCGTGTTGACCAAGTCCTA
AAGCATGACGCACAGTGACCTGCGGAACTTTGGGTTTTTTGAAGTAAATTCTTAATGTTT
CATATTGTTAATAACTGGGAAATTTGTTAAATGTTGAAAGCCTTATTACTATTTTCGGAT
CCTTTCAATAAACAGACTTGTTTTAAAAAAAAAAAA
|
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gi|47200823|emb|CAF88214.1| |
Protein identifier
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gi|47200823|emb|CAF88214.1| |
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99-721, gnl|bosTau2|chr16 (37640656-37641262) |
| |
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1633-1828, gnl|bosTau2|chr16 (37642142-37642340) |
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1633-1828, gnl|canFam2|chr5 (59744909-59745257) |
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1633-1828, gnl|canFam2|chr5 (59744909-59745257) |
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1633-1828, gnl|hg17|chr1 (1714806-1715152) |
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1633-1828, gnl|Hg17|chr1 (1715035-1714832) |
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1633-1828, gnl|hg17|chr1_random (1380866-1381212) |
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1633-1828, gnl|loxAfr1|scaffold_37519 (4761-5177) |
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1633-1828, gnl|loxAfr1|scaffold_37519 (4761-5177) |
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1633-1828, gnl|mm7|chr4 (154580568-154580241) |
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1633-1828, gnl|mm7|chr4 (154580568-154580241) |
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1633-1828, gnl|Mm7|chr4 (154580337-154580538) |
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1633-1828, gnl|monDom2|scaffold_196 (759446-759797) |
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1633-1828, gnl|monDom2|scaffold_196 (759446-759797) |
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1633-1828, gnl|panTro1|chr1 (1587073-1587432) |
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1633-1828, gnl|panTro1|chr1 (1587073-1587432) |
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1633-1828, gnl|rheMac2|chr1 (4775888-4776237) |
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1633-1828, gnl|rheMac2|chr1 (4775888-4776237) |
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1633-1828, gnl|rn3|chr5 (172433389-172433031) |
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1633-1828, gnl|rn3|chr5 (172433389-172433031) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
99-721, gnl|bosTau2|chr16 (37640656-37641262) |
| |
|
1633-1828, gnl|bosTau2|chr16 (37642142-37642340) |
|
1633-1828, gnl|canFam2|chr5 (59744909-59745257) |
|
1633-1828, gnl|canFam2|chr5 (59744909-59745257) |
|
1633-1828, gnl|hg17|chr1 (1714806-1715152) |
|
1633-1828, gnl|Hg17|chr1 (1715035-1714832) |
|
1633-1828, gnl|hg17|chr1_random (1380866-1381212) |
|
1633-1828, gnl|loxAfr1|scaffold_37519 (4761-5177) |
|
1633-1828, gnl|loxAfr1|scaffold_37519 (4761-5177) |
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1633-1828, gnl|mm7|chr4 (154580568-154580241) |
|
1633-1828, gnl|mm7|chr4 (154580568-154580241) |
|
1633-1828, gnl|Mm7|chr4 (154580337-154580538) |
|
1633-1828, gnl|monDom2|scaffold_196 (759446-759797) |
|
1633-1828, gnl|monDom2|scaffold_196 (759446-759797) |
|
1633-1828, gnl|panTro1|chr1 (1587073-1587432) |
|
1633-1828, gnl|panTro1|chr1 (1587073-1587432) |
|
1633-1828, gnl|rheMac2|chr1 (4775888-4776237) |
|
1633-1828, gnl|rheMac2|chr1 (4775888-4776237) |
|
1633-1828, gnl|rn3|chr5 (172433389-172433031) |
|
1633-1828, gnl|rn3|chr5 (172433389-172433031) |
|
cki (0.330469) |
|
nco (0.323468) |
|
cli (0.305623) |
|
col (0.195008) |
|
nep (0.183925) |
|
cst (0.140036) |
|
pla (0.133672) |
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nmm (0.132802) |
|
ute (0.132784) |
|
eep (0.122564) |
|
med (0.116252) |
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jca (0.11396) |
|
cki (0.330469) |
|
nco (0.323468) |
|
cli (0.305623) |
|
col (0.195008) |
|
nep (0.183925) |
|
cst (0.140036) |
|
pla (0.133672) |
|
nmm (0.132802) |
|
ute (0.132784) |
|
eep (0.122564) |
|
med (0.116252) |
|
jca (0.11396) |
