Ss1.1-Pig4-TMW8030K20.3
|
CAGGTTGCTCGTGAGGTAATAATCCTTTTAGACCCTTGACCTTTAATGCATTTTGGGGTA
TGAACCCTAGAGGGAGTTGGAAAGAAGCCGTTTGTTCAGTCCCTTCTTGTCCTCCGTCTC
TCTGCCATGAGACTCCATGCCTTCATCCCCAAACCGAGTCACAACTTGTGAAACACATCA
GAGTTCAAGCTTAATATCCCATCTCTCACAGGATATTTCTAACGTTTTAAGAAACTGGGC
ATATTAGTTAAAGAAGTGAAATACTTACTGCAGAATTCCTGTAAGCAGAGAGGCGGCGGC
GTACATTTGAGGGGACTAGCCTGTCTTTTAGGCCCTTCAGATCACTGGGTGACTGTAAAG
CTGGACGACGGGGGTTCTCCCAACAGTTTAATCTTGAGGTTAAGATCATTTTTTGGTAAC
GTTCTCGTATGTGTCCCATTTGTAAACTGATTTGAGTCATTTGCCCTTATCATTAAGCTC
TGTCAATTTGGTGACCTGAAGGCTGACTCACCCTGGCTCTTCATCACCAGAAGAACAGCC
ACTATGCCTGGTGTGATGTGGGGCAAGTGAACCTCCCAGCAAGAGGTCCACAGATTCACA
GTGATTACGTTTAGATGTGCGGCGGATGATGGAACTGGGGTTGGGTTCTATTTTCCTTCT
GTTCACTAAGGCGGTTCTGAAGACTCTTATCACAGAAGTCGTGTTTGTCCTTTACTAGAC
AGTTGAGAGATTTTACAACATTTTTATGCAGTTAAATTCCAAAAGGGAAACTGTTCTTGT
AACTGTCATCAACCTTTACTGGCTATCAGCTTTTGACAGTGACCTTTCTGTTCAAGTTTA
GTCCTGTTCTTTGTTTCTTGAGGGAGGAGAACCTGCCATTTTTTCATCTTTCGTTTTTTG
ACCTGTGCCCTTTTTTTAAGAGAGGGCTCTCTGTTGCCTGTTCTGAGTGATAAGTGACAT
TTTCATCTAATAACTGTGGGGTTGGGATGATCATGGTGAAATACTAGGAGGATATCTTCT
GTTGATGGACTTTTTCTTCCCAGATAATCTCAAAATAGATTGTTTCCTAGTGAATGATGA
TCTTCATCCTTTTTGTCACAAGTGTTCCTTTGATTTCTAGCTCAAGTTACAGCAGTATGC
AAATGATTCTCAGATAAAATGATGTTGACAGTATTTCCTTAACAATTTGTGTAAAACCTA
TGCGTAATTTTCATTATTCTAACTTTTGACTTTTTTTTTCTCTCCATAAATAAAAATAAT
GCCTGATGTTTA
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
CAGGTTGCTCGTGAGGTAATAATCCTTTTAGACCCTTGACCTTTAATGCATTTTGGGGTA
TGAACCCTAGAGGGAGTTGGAAAGAAGCCGTTTGTTCAGTCCCTTCTTGTCCTCCGTCTC
TCTGCCATGAGACTCCATGCCTTCATCCCCAAACCGAGTCACAACTTGTGAAACACATCA
GAGTTCAAGCTTAATATCCCATCTCTCACAGGATATTTCTAACGTTTTAAGAAACTGGGC
ATATTAGTTAAAGAAGTGAAATACTTACTGCAGAATTCCTGTAAGCAGAGAGGCGGCGGC
GTACATTTGAGGGGACTAGCCTGTCTTTTAGGCCCTTCAGATCACTGGGTGACTGTAAAG
CTGGACGACGGGGGTTCTCCCAACAGTTTAATCTTGAGGTTAAGATCATTTTTTGGTAAC
GTTCTCGTATGTGTCCCATTTGTAAACTGATTTGAGTCATTTGCCCTTATCATTAAGCTC
TGTCAATTTGGTGACCTGAAGGCTGACTCACCCTGGCTCTTCATCACCAGAAGAACAGCC
ACTATGCCTGGTGTGATGTGGGGCAAGTGAACCTCCCAGCAAGAGGTCCACAGATTCACA
GTGATTACGTTTAGATGTGCGGCGGATGATGGAACTGGGGTTGGGTTCTATTTTCCTTCT
GTTCACTAAGGCGGTTCTGAAGACTCTTATCACAGAAGTCGTGTTTGTCCTTTACTAGAC
AGTTGAGAGATTTTACAACATTTTTATGCAGTTAAATTCCAAAAGGGAAACTGTTCTTGT
AACTGTCATCAACCTTTACTGGCTATCAGCTTTTGACAGTGACCTTTCTGTTCAAGTTTA
GTCCTGTTCTTTGTTTCTTGAGGGAGGAGAACCTGCCATTTTTTCATCTTTCGTTTTTTG
ACCTGTGCCCTTTTTTTAAGAGAGGGCTCTCTGTTGCCTGTTCTGAGTGATAAGTGACAT
TTTCATCTAATAACTGTGGGGTTGGGATGATCATGGTGAAATACTAGGAGGATATCTTCT
GTTGATGGACTTTTTCTTCCCAGATAATCTCAAAATAGATTGTTTCCTAGTGAATGATGA
TCTTCATCCTTTTTGTCACAAGTGTTCCTTTGATTTCTAGCTCAAGTTACAGCAGTATGC
AAATGATTCTCAGATAAAATGATGTTGACAGTATTTCCTTAACAATTTGTGTAAAACCTA
TGCGTAATTTTCATTATTCTAACTTTTGACTTTTTTTTTCTCTCCATAAATAAAAATAAT
GCCTGATGTTTA
|
|
117-968, gnl|bosTau2|chr12 (10557430-10556581) |
|
117-968, gnl|Hg17|chr13 (50836124-50835074) |
|
117-968, gnl|Mm7|chr14 (57557823-57556789) |
| |
|
994-1272, gnl|bosTau2|chr12 (10556581-10556308) |
|
994-1272, gnl|canFam2|chr22 (3579917-3579549) |
|
994-1272, gnl|hg17|chr13 (50834767-50835123) |
|
994-1272, gnl|Hg17|chr13 (50835074-50834807) |
|
994-1272, gnl|loxAfr1|scaffold_17419 (31699-31343) |
|
994-1272, gnl|mm7|chr14 (57556487-57556833) |
|
994-1272, gnl|Mm7|chr14 (57556789-57556527) |
|
994-1272, gnl|monDom2|scaffold_15 (55102018-55101654) |
|
994-1272, gnl|oryCun1|scaffold_206038 (37837-37470) |
|
994-1272, gnl|panTro1|chr14_random (16991430-16991786) |
|
994-1272, gnl|rheMac2|chr17 (30187512-30187872) |
|
994-1272, gnl|rn3|chr15 (41955758-41956116) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
117-968, gnl|bosTau2|chr12 (10557430-10556581) |
|
117-968, gnl|Hg17|chr13 (50836124-50835074) |
|
117-968, gnl|Mm7|chr14 (57557823-57556789) |
| |
|
994-1272, gnl|bosTau2|chr12 (10556581-10556308) |
|
994-1272, gnl|canFam2|chr22 (3579917-3579549) |
|
994-1272, gnl|hg17|chr13 (50834767-50835123) |
|
994-1272, gnl|Hg17|chr13 (50835074-50834807) |
|
994-1272, gnl|loxAfr1|scaffold_17419 (31699-31343) |
|
994-1272, gnl|mm7|chr14 (57556487-57556833) |
|
994-1272, gnl|Mm7|chr14 (57556789-57556527) |
|
994-1272, gnl|monDom2|scaffold_15 (55102018-55101654) |
|
994-1272, gnl|oryCun1|scaffold_206038 (37837-37470) |
|
994-1272, gnl|panTro1|chr14_random (16991430-16991786) |
|
994-1272, gnl|rheMac2|chr17 (30187512-30187872) |
|
994-1272, gnl|rn3|chr15 (41955758-41956116) |
|
fty (0.17584) |
|
sin (0.174948) |
|
ste (0.135208) |
|
kid (0.129735) |
|
thg (0.126791) |
|
ldo (0.0970026) |
|
fty (0.17584) |
|
sin (0.174948) |
|
ste (0.135208) |
|
kid (0.129735) |
|
thg (0.126791) |
|
ldo (0.0970026) |