Ss1.1-Pig4-TMW8030L24.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GTTCATAATACTTGCTTGTGCTTTAACGGCTTGGATAAAAATATGGATGAGATGTTAGGG GAAACCAGGAGCTGTGATTTATCTTGAAGAATCATGGCAAGAGGCGGAGCTCAGTGGCTT AAGAGATGATTGAAGTTTATCCTCATATGCCGTCTTTTCTGGGTTCCTGCCTTTTACAGC CGTGGGACTTAGTGGAGACATGGCAGTGCCCTTTGTGGAAGACTGGGACTTGGTGCAAAC CCTGGGAGAAGGTGCCTATGGAGAAGTTCAACTTGCTGTGAATAGAAGAACTGAGGAAGC AGTTGCAGTGAAGATTGTAGACATGAAGCGTGCCATAGACTGTCCAGAAAATATTAAAAA AGAGATCTGTATCAATAAAATGTTAAATCATGAGAATGTAGTGAAATTCTATGGGCACAG AAGAGAAGGCAATATCCAGTATTTATTTCTGGAGTACTGTAGTGGGGGAGAACTTTTTGA TAGAATAGAGCCAGACATAGGCATGCCTGAACAAGATGCTCAGAGGTTCTTCCATCAACT CATGGCAGGGGTGGTTTATCTGCATGGTATTGGAATAACTCACAGGGATATTAAGCCAGA AAATCTCCTATTGGATGAAAGGGATAACCTCAAAATCTCTGACTTCGGCTTGGCAACCGT TTTTCGGCACAATAATCGTGAGCGTTTATTGAACAAGATGTGTGGTACTTTACCATATGT TGCTCCAGAGCTTCTGAAGAGAAAAGAATTTCATGCAGAACCAGTTGATGTTTGGTCCTG TGGAATAGTACTTACTGCAATGTTGGCTGGAGAATTGCCGTGGGACCAGCCTAGTGATAG TTGTCAGGAATA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GTTCATAATACTTGCTTGTGCTTTAACGGCTTGGATAAAAATATGGATGAGATGTTAGGG GAAACCAGGAGCTGTGATTTATCTTGAAGAATCATGGCAAGAGGCGGAGCTCAGTGGCTT AAGAGATGATTGAAGTTTATCCTCATATGCCGTCTTTTCTGGGTTCCTGCCTTTTACAGC CGTGGGACTTAGTGGAGACATGGCAGTGCCCTTTGTGGAAGACTGGGACTTGGTGCAAAC CCTGGGAGAAGGTGCCTATGGAGAAGTTCAACTTGCTGTGAATAGAAGAACTGAGGAAGC AGTTGCAGTGAAGATTGTAGACATGAAGCGTGCCATAGACTGTCCAGAAAATATTAAAAA AGAGATCTGTATCAATAAAATGTTAAATCATGAGAATGTAGTGAAATTCTATGGGCACAG AAGAGAAGGCAATATCCAGTATTTATTTCTGGAGTACTGTAGTGGGGGAGAACTTTTTGA TAGAATAGAGCCAGACATAGGCATGCCTGAACAAGATGCTCAGAGGTTCTTCCATCAACT CATGGCAGGGGTGGTTTATCTGCATGGTATTGGAATAACTCACAGGGATATTAAGCCAGA AAATCTCCTATTGGATGAAAGGGATAACCTCAAAATCTCTGACTTCGGCTTGGCAACCGT TTTTCGGCACAATAATCGTGAGCGTTTATTGAACAAGATGTGTGGTACTTTACCATATGT TGCTCCAGAGCTTCTGAAGAGAAAAGAATTTCATGCAGAACCAGTTGATGTTTGGTCCTG TGGAATAGTACTTACTGCAATGTTGGCTGGAGAATTGCCGTGGGACCAGCCTAGTGATAG TTGTCAGGAATA |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 39 entry(ies) | More info |
| Aligned organism(s): 39 entry(ies) | Help | Less info |
| 1-264, gnl|bosTau2|chr29 (22455921-22455667) | |
| 1-264, gnl|Hg17|chr11 (125001686-125001938) | |
| 1-264, gnl|Mm7|chr9 (36652437-36652205) | |
| 265-488, gnl|bosTau2|chr29 (22453968-22453745) | |
| 265-488, gnl|canFam2|chr5 (11909041-11908882) | |
| 265-488, gnl|danRer3|chr21 (15538478-15538319) | |
| 265-488, gnl|echTel1|scaffold_305776 (1241-1082) | |
| 265-488, gnl|fr1|chrUn (212886902-212887139) | |
| 265-488, gnl|galGal2|chr24 (374763-374604) | |
| 265-488, gnl|hg17|chr11 (125002711-125002870) | |
| 265-488, gnl|Hg17|chr11 (125002712-125002935) | |
| 265-488, gnl|loxAfr1|scaffold_166493 (774-615) | |
| 265-488, gnl|mm7|chr9 (36650431-36650272) | |
| 265-488, gnl|Mm7|chr9 (36650428-36650205) | |
| 265-488, gnl|monDom2|scaffold_15 (11593642-11593801) | |
| 265-488, gnl|oryCun1|scaffold_212105 (326482-326641) | |
| 265-488, gnl|panTro1|chr9 (127087017-127087177) | |
| 265-488, gnl|rheMac2|chr14 (123756646-123756805) | |
| 265-488, gnl|rn3|chr8 (37980876-37980717) | |
| 265-488, gnl|tetNig1|chr7 (3671700-3671955) | |
| 265-488, gnl|xenTro1|scaffold_1749 (7888-8047) | |
| 623-812, gnl|bosTau2|chr29 (22451475-22451286) | |
| 623-812, gnl|canFam2|chr5 (11894000-11893799) | |
| 623-812, gnl|danRer3|chr21 (15535313-15535114) | |
| 623-812, gnl|dasNov1|scaffold_2423 (1899-2086) | |
| 623-812, gnl|echTel1|scaffold_183006 (4373-4574) | |
| 623-812, gnl|fr1|chrUn (212887572-212887770) | |
| 623-812, gnl|galGal2|chr24 (374158-373960) | |
| 623-812, gnl|hg17|chr11 (125008264-125008465) | |
| 623-812, gnl|Hg17|chr11 (125008267-125008456) | |
| 623-812, gnl|mm7|chr9 (36646106-36645906) | |
| 623-812, gnl|Mm7|chr9 (36646101-36645912) | |
| 623-812, gnl|monDom2|scaffold_15 (11597271-11597472) | |
| 623-812, gnl|oryCun1|scaffold_212105 (331418-331616) | |
| 623-812, gnl|panTro1|chr9 (127092240-127092441) | |
| 623-812, gnl|rheMac2|chr14 (123762446-123762647) | |
| 623-812, gnl|rn3|chr8 (37973157-37972957) | |
| 623-812, gnl|tetNig1|chr7 (3672449-3672647) | |
| 623-812, gnl|xenTro1|scaffold_1749 (11626-11822) |
| Aligned organism(s): 39 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-264, gnl|bosTau2|chr29 (22455921-22455667) | |
| 1-264, gnl|Hg17|chr11 (125001686-125001938) | |
| 1-264, gnl|Mm7|chr9 (36652437-36652205) | |
| 265-488, gnl|bosTau2|chr29 (22453968-22453745) | |
| 265-488, gnl|canFam2|chr5 (11909041-11908882) | |
| 265-488, gnl|danRer3|chr21 (15538478-15538319) | |
| 265-488, gnl|echTel1|scaffold_305776 (1241-1082) | |
| 265-488, gnl|fr1|chrUn (212886902-212887139) | |
| 265-488, gnl|galGal2|chr24 (374763-374604) | |
| 265-488, gnl|hg17|chr11 (125002711-125002870) | |
| 265-488, gnl|Hg17|chr11 (125002712-125002935) | |
| 265-488, gnl|loxAfr1|scaffold_166493 (774-615) | |
| 265-488, gnl|mm7|chr9 (36650431-36650272) | |
| 265-488, gnl|Mm7|chr9 (36650428-36650205) | |
| 265-488, gnl|monDom2|scaffold_15 (11593642-11593801) | |
| 265-488, gnl|oryCun1|scaffold_212105 (326482-326641) | |
| 265-488, gnl|panTro1|chr9 (127087017-127087177) | |
| 265-488, gnl|rheMac2|chr14 (123756646-123756805) | |
| 265-488, gnl|rn3|chr8 (37980876-37980717) | |
| 265-488, gnl|tetNig1|chr7 (3671700-3671955) | |
| 265-488, gnl|xenTro1|scaffold_1749 (7888-8047) | |
| 623-812, gnl|bosTau2|chr29 (22451475-22451286) | |
| 623-812, gnl|canFam2|chr5 (11894000-11893799) | |
| 623-812, gnl|danRer3|chr21 (15535313-15535114) | |
| 623-812, gnl|dasNov1|scaffold_2423 (1899-2086) | |
| 623-812, gnl|echTel1|scaffold_183006 (4373-4574) | |
| 623-812, gnl|fr1|chrUn (212887572-212887770) | |
| 623-812, gnl|galGal2|chr24 (374158-373960) | |
| 623-812, gnl|hg17|chr11 (125008264-125008465) | |
| 623-812, gnl|Hg17|chr11 (125008267-125008456) | |
| 623-812, gnl|mm7|chr9 (36646106-36645906) | |
| 623-812, gnl|Mm7|chr9 (36646101-36645912) | |
| 623-812, gnl|monDom2|scaffold_15 (11597271-11597472) | |
| 623-812, gnl|oryCun1|scaffold_212105 (331418-331616) | |
| 623-812, gnl|panTro1|chr9 (127092240-127092441) | |
| 623-812, gnl|rheMac2|chr14 (123762446-123762647) | |
| 623-812, gnl|rn3|chr8 (37973157-37972957) | |
| 623-812, gnl|tetNig1|chr7 (3672449-3672647) | |
| 623-812, gnl|xenTro1|scaffold_1749 (11626-11822) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| cty (0.10408) |