Non-Coding RNA Search

Ss1.1-Pig4-TMW8030M14.3

Sequence:


               
               TTAACAGAGACATAATGTGAATGTGACTCATGAACTTAAATCTAAAAGGAATGGATTCCT
ATTCAATTTTCCTTGAAGACTCTTTTGGCCTAAAGAGCCTTTTTCAGGCTTAAGGCTAGA
GTGTTTTGTCTTTCCCCTTGGCCTCATATGCTCTGGGCTTCCAGAATTTTTTTTTTTTTA
CTATTGGTTATTTCTCTTCATCAGCCCCAGCCTAATCTGGGAAGTTAAGGGATGTGGCCA
AGGTTCTGTAACACTTTGCTATGAGAGCTAACTCCTGGCCTGATGGTCCTTCCTTGCCAC
ATACTGGTTTTTGTGATCCTTAGAGCTTGTGTGCCTAAAGCAGAGGTCACACCGGGGAAG
GAGGCTGAGAAAAGAAAACCAAGCTGGTGTTTGCAAAGCCTGATTGAACCATGGGCCGAG
ATGCCAGGACTGCTCTGTAGGATCACCTCCCTGAGGCCAGATGTCCTTTCTGGAATTCTG
CCCAGCCTGTCTCCATTGCACTTGTGTGGTGGCTGTGGGTAGTTACTGTTGGCAATATTG
TCCTTAGGCAGATCCCGCCTCCTGCCTGTGGCTGTTCCTCCTCAGCTGCATCTCTGGCTT
GCCCGTCCTGATCCTTGTTGTTGTCCTCCTGGGCTTGATGCTCTCCTCACCACTCAATAT
TGATGCTCTTTGTCCCTGAGAACACCTGCTAATTTCTTGGAAACAAGTTGAAGACAGAAC
CCTCACTCTGCTGGTATTGGAGATTGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT
GTGTAAATGGGGACAATATATACTATTTTTTATGTTTTAAGAATGTTTTTATGTTTCAAG
AAAACATAAAAAAATAGTTTATATTTTATCATAGATTTTAAGCACTTTACATGCATTATC
TGATAACCTTGCAAAGTTGGTGTTCTTGTCCTCATTTTATAGATGAGGCTTGGGGAGATT
AAATAACTTGCATTAAGTGTTAAAACCTGAATTCAGACCCTGTCTAGCTGGTTCCAGAGG
CTGAGTGCTTTACACTGTGCTGTATGTCCTGTGTGATATGACTCTGAAATTATTAAAACA
GGGTTTGCCCTGTTGAAGGTAGCAGCATTGCAAAGCTGCAGGAATTCCCTCTCTGGCTTC
AGATTGTGTTTCCCAACATGGAACCTGCTATTTATTGGTGCTAAGTAAATATGGAATCAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTAACAGAGACATAATGTGAATGTGACTCATGAACTTAAATCTAAAAGGAATGGATTCCT
ATTCAATTTTCCTTGAAGACTCTTTTGGCCTAAAGAGCCTTTTTCAGGCTTAAGGCTAGA
GTGTTTTGTCTTTCCCCTTGGCCTCATATGCTCTGGGCTTCCAGAATTTTTTTTTTTTTA
CTATTGGTTATTTCTCTTCATCAGCCCCAGCCTAATCTGGGAAGTTAAGGGATGTGGCCA
AGGTTCTGTAACACTTTGCTATGAGAGCTAACTCCTGGCCTGATGGTCCTTCCTTGCCAC
ATACTGGTTTTTGTGATCCTTAGAGCTTGTGTGCCTAAAGCAGAGGTCACACCGGGGAAG
GAGGCTGAGAAAAGAAAACCAAGCTGGTGTTTGCAAAGCCTGATTGAACCATGGGCCGAG
ATGCCAGGACTGCTCTGTAGGATCACCTCCCTGAGGCCAGATGTCCTTTCTGGAATTCTG
CCCAGCCTGTCTCCATTGCACTTGTGTGGTGGCTGTGGGTAGTTACTGTTGGCAATATTG
TCCTTAGGCAGATCCCGCCTCCTGCCTGTGGCTGTTCCTCCTCAGCTGCATCTCTGGCTT
GCCCGTCCTGATCCTTGTTGTTGTCCTCCTGGGCTTGATGCTCTCCTCACCACTCAATAT
TGATGCTCTTTGTCCCTGAGAACACCTGCTAATTTCTTGGAAACAAGTTGAAGACAGAAC
CCTCACTCTGCTGGTATTGGAGATTGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT
GTGTAAATGGGGACAATATATACTATTTTTTATGTTTTAAGAATGTTTTTATGTTTCAAG
AAAACATAAAAAAATAGTTTATATTTTATCATAGATTTTAAGCACTTTACATGCATTATC
TGATAACCTTGCAAAGTTGGTGTTCTTGTCCTCATTTTATAGATGAGGCTTGGGGAGATT
AAATAACTTGCATTAAGTGTTAAAACCTGAATTCAGACCCTGTCTAGCTGGTTCCAGAGG
CTGAGTGCTTTACACTGTGCTGTATGTCCTGTGTGATATGACTCTGAAATTATTAAAACA
GGGTTTGCCCTGTTGAAGGTAGCAGCATTGCAAAGCTGCAGGAATTCCCTCTCTGGCTTC
AGATTGTGTTTCCCAACATGGAACCTGCTATTTATTGGTGCTAAGTAAATATGGAATCAA

Aligned organism(s): 2 entry(ies)

More info

Aligned organism(s): 2 entry(ies)

Help | Less info


               
               266-770, gnl|bosTau2|chr23 (16112743-16113245)
               


               
               826-1200, gnl|bosTau2|chr23 (16113260-16113631)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               266-770, gnl|bosTau2|chr23 (16112743-16113245)
               


               
               826-1200, gnl|bosTau2|chr23 (16113260-16113631)

Expressed library(ies): 4 entry(ies)

More info

Expressed library(ies): 4 entry(ies)

Help | Less info


               
               sme (0.305437)
               

               
               nco (0.161734)
               

               
               thg (0.126791)
               

               
               cly (0.120642)

Expressed library(ies): 4 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               sme (0.305437)
               

               
               nco (0.161734)
               

               
               thg (0.126791)
               

               
               cly (0.120642)

	266-770, gnl\|bosTau2\|chr23 (16112743-16113245)

	826-1200, gnl\|bosTau2\|chr23 (16113260-16113631)