Non-Coding RNA Search

Ss1.1-Pig4-TMW8030N01.3

Sequence:


               
               CGCGGCCTGCAGGTCCCTGCGCGGCCTGCACGGCCTGCGCGGCCGCGCCTCCGGCTGGGG
CTCCGAGTCGGGCTTCGAGAGGGACAGCGGAGGCCCTCCGCCGAGGGACGGTCGGCGCCA
ACCGAGGTTCCTGAGCAAAAGAGAAAAGGAGGTTTGACCATGAGGCTTGGAGAAGGGAGA
AGGGCTGGGGAGTACGGCAAGCATCAAATTGGATATTTCTCTGGAAACACTGACAGTCTG
AATTCCCTCAATCTGTGTCTCAATCCCAAACTGAAAGGACCATCTTCCTGAGGCTCTTGG
TGATGCTGACGCTACCAGTTTGAGGACCACACTTTGAGAAACAAGGTTCTAGACTTTGAC
CTTCACTGCACAGGCTTACAAGACTGTCCTCCCTGTGAGATGGTTAGAAGATATATTTCT
ACTATTGAAGAAAACACGAGTTCAGAGATGTTGAAATGCAGCTGCCAAAGGTCATCTGAC
ATAATAGCTGATGAATTCAAGCCCAGTGGATTTCATTTGCAATTTTCAATTTACTGAGGC
CTCCAAACCCCACGGTGATAAAAGCTTCCCCTATCGTGGCCTGTCACAAACATCAAGAAA
CTGCACAAACCCACAAGAAAGGAAAAAAGAGAAAGCTGTGCATCCTCACAGGTACAGATA
AGGAGAACAGGAAGGAATGGTATCATGCAGGAAGGTATGGAGCAGCTTGTGTGGCTAGTT
CTCTAAATGCCAATTGAAAGGAAAAGACTATGAAGAACAATCAAATAACTTGCACAGAAT
AACATCATATTTCTTTGGGGCTTTTGTGTGAAAATTGCCTTCTAATCTCTTATTTGACAT
GCTCTCAAACAAAAATGTGAGTGTAAATATATGAATAAATAAATGAATAAATAATCCTTG
CTTATTGAGTCC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CGCGGCCTGCAGGTCCCTGCGCGGCCTGCACGGCCTGCGCGGCCGCGCCTCCGGCTGGGG
CTCCGAGTCGGGCTTCGAGAGGGACAGCGGAGGCCCTCCGCCGAGGGACGGTCGGCGCCA
ACCGAGGTTCCTGAGCAAAAGAGAAAAGGAGGTTTGACCATGAGGCTTGGAGAAGGGAGA
AGGGCTGGGGAGTACGGCAAGCATCAAATTGGATATTTCTCTGGAAACACTGACAGTCTG
AATTCCCTCAATCTGTGTCTCAATCCCAAACTGAAAGGACCATCTTCCTGAGGCTCTTGG
TGATGCTGACGCTACCAGTTTGAGGACCACACTTTGAGAAACAAGGTTCTAGACTTTGAC
CTTCACTGCACAGGCTTACAAGACTGTCCTCCCTGTGAGATGGTTAGAAGATATATTTCT
ACTATTGAAGAAAACACGAGTTCAGAGATGTTGAAATGCAGCTGCCAAAGGTCATCTGAC
ATAATAGCTGATGAATTCAAGCCCAGTGGATTTCATTTGCAATTTTCAATTTACTGAGGC
CTCCAAACCCCACGGTGATAAAAGCTTCCCCTATCGTGGCCTGTCACAAACATCAAGAAA
CTGCACAAACCCACAAGAAAGGAAAAAAGAGAAAGCTGTGCATCCTCACAGGTACAGATA
AGGAGAACAGGAAGGAATGGTATCATGCAGGAAGGTATGGAGCAGCTTGTGTGGCTAGTT
CTCTAAATGCCAATTGAAAGGAAAAGACTATGAAGAACAATCAAATAACTTGCACAGAAT
AACATCATATTTCTTTGGGGCTTTTGTGTGAAAATTGCCTTCTAATCTCTTATTTGACAT
GCTCTCAAACAAAAATGTGAGTGTAAATATATGAATAAATAAATGAATAAATAATCCTTG
CTTATTGAGTCC

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               458-912, gnl|bosTau2|chr1 (53344766-53344313)
               

               
               458-912, gnl|Hg17|chr3 (182735538-182735085)
               

               
               458-912, gnl|Mm7|chr3 (34291047-34290606)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               458-912, gnl|bosTau2|chr1 (53344766-53344313)
               

               
               458-912, gnl|Hg17|chr3 (182735538-182735085)
               

               
               458-912, gnl|Mm7|chr3 (34291047-34290606)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               cbe (0.239234)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cbe (0.239234)

	458-912, gnl\|bosTau2\|chr1 (53344766-53344313)
	458-912, gnl\|Hg17\|chr3 (182735538-182735085)
	458-912, gnl\|Mm7\|chr3 (34291047-34290606)