Non-Coding RNA Search

Ss1.1-Pig4-TMW8031E01.3

Sequence:


               
               CAGTCAACGTGGTGGAAACCAGTGGAACACAAGGGCCTTGTCCCCACCCCAGCCTGCACA
TAGAAACCACCCTGATTTTGTCCCTGAGCACAGTGTGAAGAGTGCAGGAGGCCACCATGC
TCGCTTCCCTGGCCCCACAGCCATGACTGAGATATGAGTGTTAAGCCTTTTAGGCATTGG
GACTGTTTCATGCAAGTTGATGGGATACATTTTCTAGAGTTTATAGAGGATTGATCACAA
TAGGAAGATTGGGGAGAAGTTATTTTATAATGAATCACTAGTTGGGTAGTGTTGTTCATG
ATTGAATTCTTCTGTGAAAGGGAAAAGGACCTGAAGAAGCTATATGTCATCAGTGTTGAA
AAGGGTATGTATGTTACCTTTTGGGGAAGAGTTTTCATGATTTTAAAATCATGTTAACAC
ATCACTCAGAAGATGTCCCAGGAGAAGGTTTGTGTTTCTGAACAAGCTGCCCATTACCAC
CCCACCCCAGGCAATACGAACAGATTGAGGTTTGAAGAATCAGACACATTAAAAGCACAC
ATAAGGAAAGCATGTCCAGGTGTGATGTATTAGCCTTTGGTGATATTTTCATTAAACTGC
TCTTATACACTATTTTTGGTACTTCTAAAGTGACCCAGGCCTTAATTTCAGTTAAGCGTC
TAAGAGTCTATAATTTTAATAATGTAATTTTAAATTGAAAACTTACTTTTTAATAAAGTA
TTTTAAATTACC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CAGTCAACGTGGTGGAAACCAGTGGAACACAAGGGCCTTGTCCCCACCCCAGCCTGCACA
TAGAAACCACCCTGATTTTGTCCCTGAGCACAGTGTGAAGAGTGCAGGAGGCCACCATGC
TCGCTTCCCTGGCCCCACAGCCATGACTGAGATATGAGTGTTAAGCCTTTTAGGCATTGG
GACTGTTTCATGCAAGTTGATGGGATACATTTTCTAGAGTTTATAGAGGATTGATCACAA
TAGGAAGATTGGGGAGAAGTTATTTTATAATGAATCACTAGTTGGGTAGTGTTGTTCATG
ATTGAATTCTTCTGTGAAAGGGAAAAGGACCTGAAGAAGCTATATGTCATCAGTGTTGAA
AAGGGTATGTATGTTACCTTTTGGGGAAGAGTTTTCATGATTTTAAAATCATGTTAACAC
ATCACTCAGAAGATGTCCCAGGAGAAGGTTTGTGTTTCTGAACAAGCTGCCCATTACCAC
CCCACCCCAGGCAATACGAACAGATTGAGGTTTGAAGAATCAGACACATTAAAAGCACAC
ATAAGGAAAGCATGTCCAGGTGTGATGTATTAGCCTTTGGTGATATTTTCATTAAACTGC
TCTTATACACTATTTTTGGTACTTCTAAAGTGACCCAGGCCTTAATTTCAGTTAAGCGTC
TAAGAGTCTATAATTTTAATAATGTAATTTTAAATTGAAAACTTACTTTTTAATAAAGTA
TTTTAAATTACC

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

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               4-730, gnl|bosTau2|chr2 (43706320-43705578)
               

               
               4-730, gnl|Hg17|chr2 (120577890-120578625)
               

               
               4-730, gnl|Mm7|chr1 (119456554-119455841)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               4-730, gnl|bosTau2|chr2 (43706320-43705578)
               

               
               4-730, gnl|Hg17|chr2 (120577890-120578625)
               

               
               4-730, gnl|Mm7|chr1 (119456554-119455841)

Expressed library(ies): 4 entry(ies)

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Expressed library(ies): 4 entry(ies)

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               cut (0.169924)
               

               
               hlv (0.139256)
               

               
               kid (0.129735)
               

               
               cty (0.10408)

Expressed library(ies): 4 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cut (0.169924)
               

               
               hlv (0.139256)
               

               
               kid (0.129735)
               

               
               cty (0.10408)

	4-730, gnl\|bosTau2\|chr2 (43706320-43705578)
	4-730, gnl\|Hg17\|chr2 (120577890-120578625)
	4-730, gnl\|Mm7\|chr1 (119456554-119455841)