Non-Coding RNA Search

Ss1.1-Pig4-TMW8031E23.3

Sequence:


               
               TATGCACCCAAAATGTCTAAAGTTGGAACCAAGATTACTTTCTATGAAGACAAAAACTTT
CAAGGCCGCCACTATGACAGTGATTGCGACTGCACGGATTTCCACATGTACCTGAGTCGC
TGCAACTCCATCAGAGTAGAAGGAGGCACCTGGGCTGTGTATGAAAGGCCCAACTTTGCC
GGGTACATGTACATCCTACCCCGGGGCGAGTATCCCGAGTACCAGCACTGGATGGGCCTC
AACGACCGCCTCAGCTCCTGCAGGGCTGTGCATCTGTCTAGCGGAGGCCAGTATAAGATT
CAGATCTTTGAGAAAGGGGATTTTACTGGTCAGATGTATGAAACCACTGAAGACTGCCCT
TCCATCATGGAGCAATTCCACATGCGAGAGGTCCACTCCTGTAAGGTGCTGGAGGGCGCC
TGGATTTTCTACGAGCTGCCCAACTACCGTGGCAGGCAGTACCTCCTGGACAAGAAGGAG
TACCGGAAGCCCATCGATTGGGGTGCAGCCTCCCCAGCCATTCAGTCTTTCCGTCGCATT
GTGGAGTGACGATGTGGATGGGGCCACAAGCTTCTTCCTGGGGGCCAAATGCTGGCTGGC
CTTGTCGTCCAAATAATCATCATAAATAAAACAATTGGCATGCAAAAAAAAAAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TATGCACCCAAAATGTCTAAAGTTGGAACCAAGATTACTTTCTATGAAGACAAAAACTTT
CAAGGCCGCCACTATGACAGTGATTGCGACTGCACGGATTTCCACATGTACCTGAGTCGC
TGCAACTCCATCAGAGTAGAAGGAGGCACCTGGGCTGTGTATGAAAGGCCCAACTTTGCC
GGGTACATGTACATCCTACCCCGGGGCGAGTATCCCGAGTACCAGCACTGGATGGGCCTC
AACGACCGCCTCAGCTCCTGCAGGGCTGTGCATCTGTCTAGCGGAGGCCAGTATAAGATT
CAGATCTTTGAGAAAGGGGATTTTACTGGTCAGATGTATGAAACCACTGAAGACTGCCCT
TCCATCATGGAGCAATTCCACATGCGAGAGGTCCACTCCTGTAAGGTGCTGGAGGGCGCC
TGGATTTTCTACGAGCTGCCCAACTACCGTGGCAGGCAGTACCTCCTGGACAAGAAGGAG
TACCGGAAGCCCATCGATTGGGGTGCAGCCTCCCCAGCCATTCAGTCTTTCCGTCGCATT
GTGGAGTGACGATGTGGATGGGGCCACAAGCTTCTTCCTGGGGGCCAAATGCTGGCTGGC
CTTGTCGTCCAAATAATCATCATAAATAAAACAATTGGCATGCAAAAAAAAAAAAAAAAA

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|27805845|ref|NP_776717.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|27805845|ref|NP_776717.1|

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               273-572, gnl|bosTau2|chr1 (54014341-54014640)
               

               
               273-572, gnl|Hg17|chr3 (187739463-187739146)
               

               
               273-572, gnl|Mm7|chr16 (22466858-22466521)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               273-572, gnl|bosTau2|chr1 (54014341-54014640)
               

               
               273-572, gnl|Hg17|chr3 (187739463-187739146)
               

               
               273-572, gnl|Mm7|chr16 (22466858-22466521)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               eye (0.852515)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               eye (0.852515)

	273-572, gnl\|bosTau2\|chr1 (54014341-54014640)
	273-572, gnl\|Hg17\|chr3 (187739463-187739146)
	273-572, gnl\|Mm7\|chr16 (22466858-22466521)