Non-Coding RNA Search

Ss1.1-Pig4-TMW8031F14.3

Sequence:


               
               TGATGGCTGAAC------------------------------------------------
------------------------AATTGGAGCTATAAGCTGCCAACCTGCACCACAGCC
ACAGCAATGTGGGATCTGAGCTGAATCTGTGGTGTAGGTTGCAGGTGCAGCTCCGATCCC
ATGTTGCTGTGGTTGTGGTGCAGGCCAGCAGCTGTAGCTCTGATTCATCCCATAGCCCAG
GAACTTCCATATGCTGTAGGTGTGACCCTAAAAAGACAAAAAAAAAATTTTTTTTAAACT
TAGTTTTATTGGTGTAAAGTTGATTTACAATGTTGTATTAGCTTCAGGTGTACAGCAAAG
TGAATTAGTCATACATAAAAATATATCCATTATTTTTTCCCATGTAGGTTAATTATGAGC
TGTTGGGTAGATTTTCTTGTGCTTTACAGCAGGTTCTTGTTAATCATCTGTTTTATACTG
TAGTGTATGTATTATTTCCACCATCCCAATGCCCCCCTTCCTCTAACTGTTTTACCTATA
TTAACTGTAAGATTGGTTTTAAAATCTGAGTTTGTTTCTCTTTTTTAAATAGGTTCTTTT
GTATCATTTTTATGCTTCCACATGTAAGTGATATACTATGGTACTTGTCTTTCTCTGACT
TATTTCACTGAGTATGATAATCTCTAGGTCCATCCATGTTGCTGATGAACCTATTATGGA
ATAAACTCTAAATAGATTGCTGAG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TGATGGCTGAAC------------------------------------------------
------------------------AATTGGAGCTATAAGCTGCCAACCTGCACCACAGCC
ACAGCAATGTGGGATCTGAGCTGAATCTGTGGTGTAGGTTGCAGGTGCAGCTCCGATCCC
ATGTTGCTGTGGTTGTGGTGCAGGCCAGCAGCTGTAGCTCTGATTCATCCCATAGCCCAG
GAACTTCCATATGCTGTAGGTGTGACCCTAAAAAGACAAAAAAAAAATTTTTTTTAAACT
TAGTTTTATTGGTGTAAAGTTGATTTACAATGTTGTATTAGCTTCAGGTGTACAGCAAAG
TGAATTAGTCATACATAAAAATATATCCATTATTTTTTCCCATGTAGGTTAATTATGAGC
TGTTGGGTAGATTTTCTTGTGCTTTACAGCAGGTTCTTGTTAATCATCTGTTTTATACTG
TAGTGTATGTATTATTTCCACCATCCCAATGCCCCCCTTCCTCTAACTGTTTTACCTATA
TTAACTGTAAGATTGGTTTTAAAATCTGAGTTTGTTTCTCTTTTTTAAATAGGTTCTTTT
GTATCATTTTTATGCTTCCACATGTAAGTGATATACTATGGTACTTGTCTTTCTCTGACT
TATTTCACTGAGTATGATAATCTCTAGGTCCATCCATGTTGCTGATGAACCTATTATGGA
ATAAACTCTAAATAGATTGCTGAG

Aligned organism(s): 1 entry(ies)

More info

Aligned organism(s): 1 entry(ies)

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               195-631, gnl|bosTau2|chr1 (50930732-50931171)

Aligned organism(s): 1 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               195-631, gnl|bosTau2|chr1 (50930732-50931171)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               fat (0.147427)
               

               
               lnt (0.142308)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               fat (0.147427)
               

               
               lnt (0.142308)