Non-Coding RNA Search

Ss1.1-Pig4-TMW8031G12.3

Sequence:


               
               TAGAGCAATACTCCATTATCGAAC------------------------------------
------------AACAGACTAGAAATAGTCTTGCATCAGGTCAGTTCAGTTTTTACTGCC
AAATGAGTTAGCCTCAAACTTAAGTAAATTTTTCAGTTTTCAGAGCTTCAAGACAATTAT
ATCTTAACTAACATCTGGGAGTTAAGAACCTGATATACTTTTGGACTCAGAATTAACTCT
GAGAGGAAAGATCACTATCATTCGAAAGTTACACCTCTCATAAACCAGAACAATGTTAGG
TGGGCTTCTTTTCCAAGACTGATGAATGTCCTTTTGCAAAGATATAGAAAGAATATTAAC
ATGTAGATTCTTCATTTAAAGAACTTTACTTAGGTAGATGTCCAGAAAGTCATCAAGAGA
GAAAGCAGAGAGTTAATGCACTCTTGAATGCATTTAAATAGAAACAGATTATTATGGGTT
TTGTTTGATCTGTCTTTTTTGGTTTTGTTTTATTTCAAGATGTCAGCATTGTAGGTCATG
TTAATTTCCATATATTTGGAAGAATGCAATAAGGTACCTTTAGTTATCAAAGGAACTCAG
TTTTTTTAAATAACTTATTATTTTAAGAAGGCAGTGTTTTATTTAAGTTTGTGTTTAACT
CTTTTTCATGTAAATAGAAACCATTTTTACATTTGAGTTAATCTTTGCAGGATGTCAAAA
TCAAACATATATTACCATTTCTTAGAAAAATAACATATTAGTTAACTAAAGCTTAAAGGT
AATGTACATTGTAATACCAATAAACTTTCTAACGTA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TAGAGCAATACTCCATTATCGAAC------------------------------------
------------AACAGACTAGAAATAGTCTTGCATCAGGTCAGTTCAGTTTTTACTGCC
AAATGAGTTAGCCTCAAACTTAAGTAAATTTTTCAGTTTTCAGAGCTTCAAGACAATTAT
ATCTTAACTAACATCTGGGAGTTAAGAACCTGATATACTTTTGGACTCAGAATTAACTCT
GAGAGGAAAGATCACTATCATTCGAAAGTTACACCTCTCATAAACCAGAACAATGTTAGG
TGGGCTTCTTTTCCAAGACTGATGAATGTCCTTTTGCAAAGATATAGAAAGAATATTAAC
ATGTAGATTCTTCATTTAAAGAACTTTACTTAGGTAGATGTCCAGAAAGTCATCAAGAGA
GAAAGCAGAGAGTTAATGCACTCTTGAATGCATTTAAATAGAAACAGATTATTATGGGTT
TTGTTTGATCTGTCTTTTTTGGTTTTGTTTTATTTCAAGATGTCAGCATTGTAGGTCATG
TTAATTTCCATATATTTGGAAGAATGCAATAAGGTACCTTTAGTTATCAAAGGAACTCAG
TTTTTTTAAATAACTTATTATTTTAAGAAGGCAGTGTTTTATTTAAGTTTGTGTTTAACT
CTTTTTCATGTAAATAGAAACCATTTTTACATTTGAGTTAATCTTTGCAGGATGTCAAAA
TCAAACATATATTACCATTTCTTAGAAAAATAACATATTAGTTAACTAAAGCTTAAAGGT
AATGTACATTGTAATACCAATAAACTTTCTAACGTA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               28-765, gnl|bosTau2|chr16 (43551095-43550388)
               

               
               28-765, gnl|Hg17|chr1 (172643840-172643168)
               

               
               28-765, gnl|Mm7|chr1 (159308582-159309557)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               28-765, gnl|bosTau2|chr16 (43551095-43550388)
               

               
               28-765, gnl|Hg17|chr1 (172643840-172643168)
               

               
               28-765, gnl|Mm7|chr1 (159308582-159309557)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               bfe (0.149858)
               

               
               tra (0.123092)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               bfe (0.149858)
               

               
               tra (0.123092)

	28-765, gnl\|bosTau2\|chr16 (43551095-43550388)
	28-765, gnl\|Hg17\|chr1 (172643840-172643168)
	28-765, gnl\|Mm7\|chr1 (159308582-159309557)