Ss1.1-Pig4-TMW8031K06.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| TGCACAGGCAGACTTGACCTTGATCAGAGAGTCTTCAAGATGCCAAACTGGGGCGGAGGA GCGAAATGCGGAGCCTGCGACAAGACCGTCTACCACGCAGAAGAAATCCAGTGCAATGGA AGGAGCTTCCACAAGACCTGTTTCCACTGCATGGCCTGCAGGAAGGCTCTAGACAGCACC ACGGTAGCAGCTCACGAGTCAGAGATCTACTGTAAGGTCTGCTATGGGCGCAGGTACGGC CCCAAGGGGATCGGCTATGGACAAGGTGCCGGCTGCCTCAGCACGGACACAGGCGAACAC CTGGGCCTCCAGTTCCAACAGTCCCCAAAGCCAGCACGCTCAGCCACCACCAGCAACCCT TCCAAGTTCACTGCAAAGTTCGGAGAGTCGGAGAAGTGCCCCCGATGTGGAAAGTCAGTC TATGCTGCTGAGAAGGTGATGGGAGGTGGCAAGCCTTGGCACAAGACCTGTTTTCGCTGT GCCATCTGTGGGAAGAGTCTAGAATCCACAAACGTCACTGACAAAGACGGAGAACTTTAT TGCAAAGTTTGCTACGCCAAAAATTTTGGCCCTACAGGTATTGGGTTTGGGGGCCTTACA CACCAGGTGGAAAAGAAAGAGTGAGAAGTGCACCACCTCTCAGATCTCTCATTGGCCTAA AGCATTAGCTGAGTAATCCTGCCTGAAGGAAACCCCTCCCCACACACCCTCTTGATGGAA GTATTTCGCTTCAGAAGTGATCCCAATCTTTACCTGAAGTTAGAAGAGATCTTTGGAAGA AAATTATTAAAAGTCAGTAACAAATGCTCTACTATTGATGATACCTGGGCTGGGAGAAGC CAAAAATAAAAGCTTTAGTGGTAAAAAAAAAAAAAA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| TGCACAGGCAGACTTGACCTTGATCAGAGAGTCTTCAAGATGCCAAACTGGGGCGGAGGA GCGAAATGCGGAGCCTGCGACAAGACCGTCTACCACGCAGAAGAAATCCAGTGCAATGGA AGGAGCTTCCACAAGACCTGTTTCCACTGCATGGCCTGCAGGAAGGCTCTAGACAGCACC ACGGTAGCAGCTCACGAGTCAGAGATCTACTGTAAGGTCTGCTATGGGCGCAGGTACGGC CCCAAGGGGATCGGCTATGGACAAGGTGCCGGCTGCCTCAGCACGGACACAGGCGAACAC CTGGGCCTCCAGTTCCAACAGTCCCCAAAGCCAGCACGCTCAGCCACCACCAGCAACCCT TCCAAGTTCACTGCAAAGTTCGGAGAGTCGGAGAAGTGCCCCCGATGTGGAAAGTCAGTC TATGCTGCTGAGAAGGTGATGGGAGGTGGCAAGCCTTGGCACAAGACCTGTTTTCGCTGT GCCATCTGTGGGAAGAGTCTAGAATCCACAAACGTCACTGACAAAGACGGAGAACTTTAT TGCAAAGTTTGCTACGCCAAAAATTTTGGCCCTACAGGTATTGGGTTTGGGGGCCTTACA CACCAGGTGGAAAAGAAAGAGTGAGAAGTGCACCACCTCTCAGATCTCTCATTGGCCTAA AGCATTAGCTGAGTAATCCTGCCTGAAGGAAACCCCTCCCCACACACCCTCTTGATGGAA GTATTTCGCTTCAGAAGTGATCCCAATCTTTACCTGAAGTTAGAAGAGATCTTTGGAAGA AAATTATTAAAAGTCAGTAACAAATGCTCTACTATTGATGATACCTGGGCTGGGAGAAGC CAAAAATAAAAGCTTTAGTGGTAAAAAAAAAAAAAA |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 22 entry(ies) | More info |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
| 141-322, gnl|bosTau2|chr29 (19425325-19425507) | |
| 141-322, gnl|canFam2|chr21 (44495310-44495503) | |
| 141-322, gnl|danRer3|chrUn (145823057-145822871) | |
| 141-322, gnl|dasNov1|scaffold_263722 (583-736) | |
| 141-322, gnl|echTel1|scaffold_309717 (175596-175409) | |
| 141-322, gnl|fr1|chrUn (69174289-69174100) | |
| 141-322, gnl|galGal2|chr5 (1760670-1760485) | |
| 141-322, gnl|hg17|chr11 (19166254-19166442) | |
| 141-322, gnl|Hg17|chr11 (19166439-19166257) | |
| 141-322, gnl|loxAfr1|scaffold_4266 (3827-4015) | |
| 141-322, gnl|mm7|chr7 (45056127-45056315) | |
| 141-322, gnl|Mm7|chr7 (45056312-45056130) | |
| 141-322, gnl|monDom2|scaffold_10 (65092652-65092833) | |
| 141-322, gnl|oryCun1|scaffold_207919 (47363-47551) | |
| 141-322, gnl|panTro1|chr9_random (11302527-11302716) | |
| 141-322, gnl|rheMac2|chr14 (52685829-52685641) | |
| 141-322, gnl|rn3|chr1 (98684923-98685111) | |
| 141-322, gnl|tetNig1|chr5 (12124594-12124403) | |
| 141-322, gnl|xenTro1|scaffold_1410 (138615-138802) | |
| 546-860, gnl|bosTau2|chr29 (19430862-19431190) | |
| 546-860, gnl|Hg17|chr11 (19160871-19160539) | |
| 546-860, gnl|Mm7|chr7 (45051373-45051073) |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 141-322, gnl|bosTau2|chr29 (19425325-19425507) | |
| 141-322, gnl|canFam2|chr21 (44495310-44495503) | |
| 141-322, gnl|danRer3|chrUn (145823057-145822871) | |
| 141-322, gnl|dasNov1|scaffold_263722 (583-736) | |
| 141-322, gnl|echTel1|scaffold_309717 (175596-175409) | |
| 141-322, gnl|fr1|chrUn (69174289-69174100) | |
| 141-322, gnl|galGal2|chr5 (1760670-1760485) | |
| 141-322, gnl|hg17|chr11 (19166254-19166442) | |
| 141-322, gnl|Hg17|chr11 (19166439-19166257) | |
| 141-322, gnl|loxAfr1|scaffold_4266 (3827-4015) | |
| 141-322, gnl|mm7|chr7 (45056127-45056315) | |
| 141-322, gnl|Mm7|chr7 (45056312-45056130) | |
| 141-322, gnl|monDom2|scaffold_10 (65092652-65092833) | |
| 141-322, gnl|oryCun1|scaffold_207919 (47363-47551) | |
| 141-322, gnl|panTro1|chr9_random (11302527-11302716) | |
| 141-322, gnl|rheMac2|chr14 (52685829-52685641) | |
| 141-322, gnl|rn3|chr1 (98684923-98685111) | |
| 141-322, gnl|tetNig1|chr5 (12124594-12124403) | |
| 141-322, gnl|xenTro1|scaffold_1410 (138615-138802) | |
| 546-860, gnl|bosTau2|chr29 (19430862-19431190) | |
| 546-860, gnl|Hg17|chr11 (19160871-19160539) | |
| 546-860, gnl|Mm7|chr7 (45051373-45051073) |
| Expressed library(ies): 18 entry(ies) | More info |
| Expressed library(ies): 18 entry(ies) | Help | Less info |
| che (2.99891) | |
| ssp (2.84591) | |
| hlv (2.64587) | |
| nms (2.35244) | |
| hea (1.84049) | |
| tbr (1.69596) | |
| mas (1.26183) | |
| ste (1.21687) | |
| ese (0.632511) | |
| ldo (0.582016) | |
| bfe (0.449573) | |
| nca (0.410621) | |
| ton (0.351) | |
| vin (0.332557) | |
| eye (0.170503) | |
| isp (0.150376) | |
| eru (0.120048) | |
| jca (0.11396) |
| Expressed library(ies): 18 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| che (2.99891) | |
| ssp (2.84591) | |
| hlv (2.64587) | |
| nms (2.35244) | |
| hea (1.84049) | |
| tbr (1.69596) | |
| mas (1.26183) | |
| ste (1.21687) | |
| ese (0.632511) | |
| ldo (0.582016) | |
| bfe (0.449573) | |
| nca (0.410621) | |
| ton (0.351) | |
| vin (0.332557) | |
| eye (0.170503) | |
| isp (0.150376) | |
| eru (0.120048) | |
| jca (0.11396) |