Ss1.1-Pig4-TMW8031O08.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CCGCCTCTGCCTGCCTGCCGTCTGGGGCGCCAGCAAGCCCCCCTCGGTTCCTGATGTGAC TGCGCACCCTGGCTGGGCGCCCCCAAGCCATGGCCGACACCATCTTCGGCAGCGGGAGTG ACCAGTGGGTCTGCCCCAATGATCGACAGCTCGCCCTGCGAGCCAACAGCAGCCAGAAGC TATTGTAGCACCTCTTAGAAGAGCAAATGCTTTTATCTTCTCCCCGGGGTGTGCTGCCTT GTACTGCCGGGCTCCTGCAGGTCATCCAGAGGGCCGAGCGGCTCGACGTCCTGGAGCAGC AGAGAATCGGGCGGCTGGTGGAGCGTCTGGAGACCATGAGGCACGGTGTGATGGGGAATG GCCTCTCCCAGTGTCTGCTCTGTGGGGAGGTGCTGGGCTTCCTGGGCAGCTCATCGGTGT TCTGCAAAGACTGCAGGAAGAAAGTCTGCACCAAATGTGGGATCGAGGCCTCCCCCGGCC AGAAGCGGCCCCTGTGGCTGTGTAAGATCTGCAGTGAGCAGAGAGAGGTCTGGAAGAGGT CGGGGGCCTGGTTCTACAAAGGGATCCCCAAGTACATCCTGCCCCTGAAGACCCCCGGCC AGGCCAGTCACCCCCACTTCCAACCGCTGCCTGTGGAGCCGACCGAGCCAGAGCCCAGAA GCACTGAGACCAGCCGCGTCTACACGTGGGCCCGAGGGAGAGTGGTGTCCAGCGACAGTG ACAGTGACTCTGATCTCAGCTCGTCCAGCCTGGAGAACAGACTTCCAGCTCCTGGGACCA GGGACCCAAAAGGAGACAAACCCTGGGGGGAATCAGGTGGCAGCATGGAGTCCCCCAAGA TGGGGCCCTCCCGCCCACCCAGCCACCTCTCAGGGAGCCAGAGCAGCCTGGCCAGTGAGG CCGGGACGGGAGCAGCAGACCCACAGGTGGGGACCCCCCCCTGGCCAGACCCAAAGGGCC CTGGTGAGTACCAAGCCACTCCTCCCACCCACCCCCTGTCTTCTCCCCTCCCTCATCAGT GCTCCTGGACTAGGAGCTAGGTGGCATTTTCAGCCCTATGCCGGGGCTGGGGGAACAGAG GGGAGCCAGACCCCAGCCCTGCCCTCAGTGGACAGAGAGAGGAGCCCAGAAGAAGAACAG TGACCGTCCCTCTCCGTCCTCCGAAACTACCACAGTGGCTGTCACCATCCTCCGCTTTAT GAAACATATAATCTTTCAAAATATTTCCCCATCTCCAGAACAATCACGGTAACTCCATTT TTAGAGCACCTACCCAGCCGCTCACTCAGCCTGACCTTAATTTATTGC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CCGCCTCTGCCTGCCTGCCGTCTGGGGCGCCAGCAAGCCCCCCTCGGTTCCTGATGTGAC TGCGCACCCTGGCTGGGCGCCCCCAAGCCATGGCCGACACCATCTTCGGCAGCGGGAGTG ACCAGTGGGTCTGCCCCAATGATCGACAGCTCGCCCTGCGAGCCAACAGCAGCCAGAAGC TATTGTAGCACCTCTTAGAAGAGCAAATGCTTTTATCTTCTCCCCGGGGTGTGCTGCCTT GTACTGCCGGGCTCCTGCAGGTCATCCAGAGGGCCGAGCGGCTCGACGTCCTGGAGCAGC AGAGAATCGGGCGGCTGGTGGAGCGTCTGGAGACCATGAGGCACGGTGTGATGGGGAATG GCCTCTCCCAGTGTCTGCTCTGTGGGGAGGTGCTGGGCTTCCTGGGCAGCTCATCGGTGT TCTGCAAAGACTGCAGGAAGAAAGTCTGCACCAAATGTGGGATCGAGGCCTCCCCCGGCC AGAAGCGGCCCCTGTGGCTGTGTAAGATCTGCAGTGAGCAGAGAGAGGTCTGGAAGAGGT CGGGGGCCTGGTTCTACAAAGGGATCCCCAAGTACATCCTGCCCCTGAAGACCCCCGGCC AGGCCAGTCACCCCCACTTCCAACCGCTGCCTGTGGAGCCGACCGAGCCAGAGCCCAGAA GCACTGAGACCAGCCGCGTCTACACGTGGGCCCGAGGGAGAGTGGTGTCCAGCGACAGTG ACAGTGACTCTGATCTCAGCTCGTCCAGCCTGGAGAACAGACTTCCAGCTCCTGGGACCA GGGACCCAAAAGGAGACAAACCCTGGGGGGAATCAGGTGGCAGCATGGAGTCCCCCAAGA TGGGGCCCTCCCGCCCACCCAGCCACCTCTCAGGGAGCCAGAGCAGCCTGGCCAGTGAGG CCGGGACGGGAGCAGCAGACCCACAGGTGGGGACCCCCCCCTGGCCAGACCCAAAGGGCC CTGGTGAGTACCAAGCCACTCCTCCCACCCACCCCCTGTCTTCTCCCCTCCCTCATCAGT GCTCCTGGACTAGGAGCTAGGTGGCATTTTCAGCCCTATGCCGGGGCTGGGGGAACAGAG GGGAGCCAGACCCCAGCCCTGCCCTCAGTGGACAGAGAGAGGAGCCCAGAAGAAGAACAG TGACCGTCCCTCTCCGTCCTCCGAAACTACCACAGTGGCTGTCACCATCCTCCGCTTTAT GAAACATATAATCTTTCAAAATATTTCCCCATCTCCAGAACAATCACGGTAACTCCATTT TTAGAGCACCTACCCAGCCGCTCACTCAGCCTGACCTTAATTTATTGC |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 31 entry(ies) | More info |
| Aligned organism(s): 31 entry(ies) | Help | Less info |
| 53-166, gnl|bosTau2|chr19 (16844321-16844433) | |
| 53-166, gnl|canFam2|chr9 (48658397-48658306) | |
| 53-166, gnl|danRer3|chr6 (22795919-22796007) | |
| 53-166, gnl|dasNov1|scaffold_11409 (49943-50034) | |
| 53-166, gnl|echTel1|scaffold_280879 (96358-96267) | |
| 53-166, gnl|galGal2|chr19 (6568908-6568817) | |
| 53-166, gnl|hg17|chr17 (177250-177341) | |
| 53-166, gnl|Hg17|chr17 (177371-177258) | |
| 53-166, gnl|loxAfr1|scaffold_27660 (9349-9440) | |
| 53-166, gnl|mm7|chr11 (75992516-75992607) | |
| 53-166, gnl|Mm7|chr11 (75992634-75992524) | |
| 53-166, gnl|oryCun1|scaffold_205600 (56975-57071) | |
| 53-166, gnl|panTro1|chr19 (266576-266667) | |
| 53-166, gnl|rheMac2|chr16 (184267-184358) | |
| 53-166, gnl|rn3|chr10 (63279073-63279164) | |
| 310-440, gnl|bosTau2|chr19 (16850641-16850771) | |
| 310-440, gnl|canFam2|chr9 (48667389-48667302) | |
| 310-440, gnl|danRer3|chr6 (22790408-22790495) | |
| 310-440, gnl|dasNov1|scaffold_156824 (1377-1290) | |
| 310-440, gnl|echTel1|scaffold_280879 (101489-101402) | |
| 310-440, gnl|galGal2|chr19 (6570897-6570810) | |
| 310-440, gnl|hg17|chr17 (169208-169295) | |
| 310-440, gnl|Hg17|chr17 (169341-169211) | |
| 310-440, gnl|loxAfr1|scaffold_27660 (2095-2182) | |
| 310-440, gnl|mm7|chr11 (75988089-75988176) | |
| 310-440, gnl|Mm7|chr11 (75988222-75988092) | |
| 310-440, gnl|monDom2|scaffold_86 (2153368-2153281) | |
| 310-440, gnl|oryCun1|scaffold_205600 (53074-53161) | |
| 310-440, gnl|panTro1|chr19 (257612-257699) | |
| 310-440, gnl|rn3|chr10 (63274722-63274809) | |
| 310-440, gnl|xenTro1|scaffold_56 (1392717-1392804) |
| Aligned organism(s): 31 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 53-166, gnl|bosTau2|chr19 (16844321-16844433) | |
| 53-166, gnl|canFam2|chr9 (48658397-48658306) | |
| 53-166, gnl|danRer3|chr6 (22795919-22796007) | |
| 53-166, gnl|dasNov1|scaffold_11409 (49943-50034) | |
| 53-166, gnl|echTel1|scaffold_280879 (96358-96267) | |
| 53-166, gnl|galGal2|chr19 (6568908-6568817) | |
| 53-166, gnl|hg17|chr17 (177250-177341) | |
| 53-166, gnl|Hg17|chr17 (177371-177258) | |
| 53-166, gnl|loxAfr1|scaffold_27660 (9349-9440) | |
| 53-166, gnl|mm7|chr11 (75992516-75992607) | |
| 53-166, gnl|Mm7|chr11 (75992634-75992524) | |
| 53-166, gnl|oryCun1|scaffold_205600 (56975-57071) | |
| 53-166, gnl|panTro1|chr19 (266576-266667) | |
| 53-166, gnl|rheMac2|chr16 (184267-184358) | |
| 53-166, gnl|rn3|chr10 (63279073-63279164) | |
| 310-440, gnl|bosTau2|chr19 (16850641-16850771) | |
| 310-440, gnl|canFam2|chr9 (48667389-48667302) | |
| 310-440, gnl|danRer3|chr6 (22790408-22790495) | |
| 310-440, gnl|dasNov1|scaffold_156824 (1377-1290) | |
| 310-440, gnl|echTel1|scaffold_280879 (101489-101402) | |
| 310-440, gnl|galGal2|chr19 (6570897-6570810) | |
| 310-440, gnl|hg17|chr17 (169208-169295) | |
| 310-440, gnl|Hg17|chr17 (169341-169211) | |
| 310-440, gnl|loxAfr1|scaffold_27660 (2095-2182) | |
| 310-440, gnl|mm7|chr11 (75988089-75988176) | |
| 310-440, gnl|Mm7|chr11 (75988222-75988092) | |
| 310-440, gnl|monDom2|scaffold_86 (2153368-2153281) | |
| 310-440, gnl|oryCun1|scaffold_205600 (53074-53161) | |
| 310-440, gnl|panTro1|chr19 (257612-257699) | |
| 310-440, gnl|rn3|chr10 (63274722-63274809) | |
| 310-440, gnl|xenTro1|scaffold_56 (1392717-1392804) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| eep (0.122564) |