Non-Coding RNA Search

Ss1.1-Pig4-TMW8032B10.3

Sequence:


               
               TAGCAACAACAACAACAACAAGACAAAAAAAGACCCCCCCAAAAAAAAAAAGAAGATTTA
TGGCTATGGAAGAAAAAAGTAGAATGGCTATGGAAGAGTAGAATGATATTCCCTATTATA
AGGGGAATCTAAACAGCTTGCCTGCTTCAGTGAAGAATGGATAGAGTTATTAAATAAGGA
CTGGACTTGTGTTTAAGAGCCTCAAAAGAAAGGAATTTTCATTAGAGCCTTTAGAGTTAT
TAAATTGTATTCTTAGCCTTTATATTTATTATGTAATTTTAAGGAAATTTACCCCACTAA
TAATATTTATTAGTAGTAATTAAGGTTAAATTTGGTGTGTGTATTGTCATATTTTAGCCT
TTTATAAGAGGCATGTTGGGGAACCCTTTCCCCCCTGCCATTGAAACATCTGAGTCATCA
GAAGATAACTATCAGACTTTTTACCCACTGCTTGGAAGTGGATTTTGATCCTTGATATGA
GAGCTTCTGACCAAGAAAGAAGTAATAATATAACCAACATTTACTTAACAATTAATAATT
CTTATGGATTACTAGCTAACCATTTTAAAATTTAACTATGTTTTACTAATTAATTGTGTT
AATTCCAGGCTTCTTACCACACAGTTATTTGTGCTCAGAAAGTGTTTGCTGATATTAATA
ATATTGAAGTCACAAAGTATGATTTCCTTTGTAGAC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TAGCAACAACAACAACAACAAGACAAAAAAAGACCCCCCCAAAAAAAAAAAGAAGATTTA
TGGCTATGGAAGAAAAAAGTAGAATGGCTATGGAAGAGTAGAATGATATTCCCTATTATA
AGGGGAATCTAAACAGCTTGCCTGCTTCAGTGAAGAATGGATAGAGTTATTAAATAAGGA
CTGGACTTGTGTTTAAGAGCCTCAAAAGAAAGGAATTTTCATTAGAGCCTTTAGAGTTAT
TAAATTGTATTCTTAGCCTTTATATTTATTATGTAATTTTAAGGAAATTTACCCCACTAA
TAATATTTATTAGTAGTAATTAAGGTTAAATTTGGTGTGTGTATTGTCATATTTTAGCCT
TTTATAAGAGGCATGTTGGGGAACCCTTTCCCCCCTGCCATTGAAACATCTGAGTCATCA
GAAGATAACTATCAGACTTTTTACCCACTGCTTGGAAGTGGATTTTGATCCTTGATATGA
GAGCTTCTGACCAAGAAAGAAGTAATAATATAACCAACATTTACTTAACAATTAATAATT
CTTATGGATTACTAGCTAACCATTTTAAAATTTAACTATGTTTTACTAATTAATTGTGTT
AATTCCAGGCTTCTTACCACACAGTTATTTGTGCTCAGAAAGTGTTTGCTGATATTAATA
ATATTGAAGTCACAAAGTATGATTTCCTTTGTAGAC

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

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               95-696, gnl|bosTau2|chr10 (56319900-56320495)
               

               
               95-696, gnl|Hg17|chr14 (74250511-74251233)
               

               
               95-696, gnl|Mm7|chr12 (82971870-82972689)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               95-696, gnl|bosTau2|chr10 (56319900-56320495)
               

               
               95-696, gnl|Hg17|chr14 (74250511-74251233)
               

               
               95-696, gnl|Mm7|chr12 (82971870-82972689)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               clu (0.837521)
               

               
               spc (0.113366)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               clu (0.837521)
               

               
               spc (0.113366)

	95-696, gnl\|bosTau2\|chr10 (56319900-56320495)
	95-696, gnl\|Hg17\|chr14 (74250511-74251233)
	95-696, gnl\|Mm7\|chr12 (82971870-82972689)