Ss1.1-Pig4-TMW8032E18.3
|
AGACCGTGCAAGGAATTCACCTCAAGAACATCCAGAACCTGAAGGTGACATCCCCGGGAC
CCCACTGTGACCAAACGGAAGTCATAGCCACTCTCAAGAATGGTCAGGAAGTTTGTCTCA
ACCCCGCAGCCCCCATGGTGAAGAAAATCATCGAGAAGATGCTAAACAAGGCCAACTCCA
ACTGACCAGGGGAGAAGGAAGTTCCTCCATCACTGTTCCTGAAGTAAGCCCTGCCCTTCC
AGGAATCGAAGAAGGATTGCCAGCTCACGGGGTCACCTGGGTCCGGTTTAATATGTTTGA
ACATCTCTTAGGAGGGCTCTTCCACTTATTTATTTATTTATTTATTTAACCATTGCTTAG
TTTGCAAAGATTCTTTGTTAATATTTACAGGTAAAATAATTAAGGATGTGATTGAATCTC
CTCGCACGCCGTATCATTGTTTTTATTATGTATTTTATGAAAGAAAACAAGTTAATTTAG
TCCTGATTCTTATTTAACTTGAAGTAGAATGTTTCCACATGTTCTCCAGTCATTAAACTA
ATATTCTGAAGCACCTACAGCATGCCAGCCCTGTGACAGAGGCCAGGGGATGCCGGCCAA
ACTTGAGATCCTTGTCAGGGTGGGGGAACGTGTGGGTACATCTCTTTCTGTAAATGTTTA
AAAGAATGTTAGTTGTTCTTTACTGAAATGATTTCATGGTATGTGGGCAACATTTCCCAT
GTTGAAGCTTTAAGAACTGTAATGTTCTAAATATCCTTTAGACATTTTATGTCTTTCTTG
TAAGGCATAATGCCTTGTTTAATGTTACTTACAAAGTGCCTTTCCTTGACTTCGAAAAAA
AGAAATTTCAATACTTGTGGATGTTTTTACATAAAATATGAAAATAAAGTATTTCAAACG
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAGCTTGTA
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
AGACCGTGCAAGGAATTCACCTCAAGAACATCCAGAACCTGAAGGTGACATCCCCGGGAC
CCCACTGTGACCAAACGGAAGTCATAGCCACTCTCAAGAATGGTCAGGAAGTTTGTCTCA
ACCCCGCAGCCCCCATGGTGAAGAAAATCATCGAGAAGATGCTAAACAAGGCCAACTCCA
ACTGACCAGGGGAGAAGGAAGTTCCTCCATCACTGTTCCTGAAGTAAGCCCTGCCCTTCC
AGGAATCGAAGAAGGATTGCCAGCTCACGGGGTCACCTGGGTCCGGTTTAATATGTTTGA
ACATCTCTTAGGAGGGCTCTTCCACTTATTTATTTATTTATTTATTTAACCATTGCTTAG
TTTGCAAAGATTCTTTGTTAATATTTACAGGTAAAATAATTAAGGATGTGATTGAATCTC
CTCGCACGCCGTATCATTGTTTTTATTATGTATTTTATGAAAGAAAACAAGTTAATTTAG
TCCTGATTCTTATTTAACTTGAAGTAGAATGTTTCCACATGTTCTCCAGTCATTAAACTA
ATATTCTGAAGCACCTACAGCATGCCAGCCCTGTGACAGAGGCCAGGGGATGCCGGCCAA
ACTTGAGATCCTTGTCAGGGTGGGGGAACGTGTGGGTACATCTCTTTCTGTAAATGTTTA
AAAGAATGTTAGTTGTTCTTTACTGAAATGATTTCATGGTATGTGGGCAACATTTCCCAT
GTTGAAGCTTTAAGAACTGTAATGTTCTAAATATCCTTTAGACATTTTATGTCTTTCTTG
TAAGGCATAATGCCTTGTTTAATGTTACTTACAAAGTGCCTTTCCTTGACTTCGAAAAAA
AGAAATTTCAATACTTGTGGATGTTTTTACATAAAATATGAAAATAAAGTATTTCAAACG
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAGCTTGTA
|
|
gi|2905630|gb|AAC03540.1| |
Protein identifier
|
gi|2905630|gb|AAC03540.1| |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
167-903, gnl|bosTau2|chr6 (50098698-50099458) |
|
167-903, gnl|canFam2|chr13 (65473497-65474129) |
|
167-903, gnl|dasNov1|scaffold_46771 (10878-11500) |
|
167-903, gnl|echTel1|scaffold_288715 (11965-12524) |
|
167-903, gnl|hg17|chr4 (75101151-75101764) |
|
167-903, gnl|Hg17|chr4 (75101270-75101993) |
|
167-903, gnl|loxAfr1|scaffold_7474 (63206-63801) |
|
167-903, gnl|mm7|chr5 (90758630-90759140) |
|
167-903, gnl|Mm7|chr5 (90758704-90759367) |
|
167-903, gnl|oryCun1|scaffold_210740 (46399-45831) |
|
167-903, gnl|panTro1|chr3 (58597025-58596412) |
|
167-903, gnl|rheMac2|chr5 (55807733-55807122) |
|
167-903, gnl|rn3|chr14 (18786437-18785899) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
167-903, gnl|bosTau2|chr6 (50098698-50099458) |
|
167-903, gnl|canFam2|chr13 (65473497-65474129) |
|
167-903, gnl|dasNov1|scaffold_46771 (10878-11500) |
|
167-903, gnl|echTel1|scaffold_288715 (11965-12524) |
|
167-903, gnl|hg17|chr4 (75101151-75101764) |
|
167-903, gnl|Hg17|chr4 (75101270-75101993) |
|
167-903, gnl|loxAfr1|scaffold_7474 (63206-63801) |
|
167-903, gnl|mm7|chr5 (90758630-90759140) |
|
167-903, gnl|Mm7|chr5 (90758704-90759367) |
|
167-903, gnl|oryCun1|scaffold_210740 (46399-45831) |
|
167-903, gnl|panTro1|chr3 (58597025-58596412) |
|
167-903, gnl|rheMac2|chr5 (55807733-55807122) |
|
167-903, gnl|rn3|chr14 (18786437-18785899) |
|
sto (0.179824) |
|
sin (0.174948) |
|
rec (0.17307) |
|
duo (0.172801) |
|
cje (0.165235) |
|
liv (0.146284) |
|
sto (0.179824) |
|
sin (0.174948) |
|
rec (0.17307) |
|
duo (0.172801) |
|
cje (0.165235) |
|
liv (0.146284) |
