Ss1.1-Pig4-TMW8032F22.3
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CCAAAAAGCCCGTGATGAGAGATCAAGAGAAAGAAGTCGTTTATGAGTTTAGCACAACGA AAAAGCATTTAGCAGAGGGCCTGCTGCACTCTATTCTCTCAGAACTAAAACTTCAGAAGG CGTCCGTGGAGCGCAGCTACATCCACGCCCTGTGCAGGGTGTACGTGGGCGTGTGTCGCC AGCTGGGGGACCTGGAGAGGGCGCGCCTGTTCTGCTACAGCCTGCTGAAGGAAGATTTTC CAGAGTCTGAAAAACTGACGTCGTGCCACATGTTGGTGTGGCACGACGTGTTCATCTCAC CGTCGGCGATTAACCAGGCCATGCAGTTGGTGGCCCGGCAGCGCGCCCGCGGGGAGGTCC TGAACTGCCTGCGAGCGTTCCTCAGCTGGGAGAAGAACGCTCCTCTAGATGTGGGCTTCA TGGTCTCTAAGCTGCTTCTGACCATACAGTTGTGTCCAAACACAGAGTTTCAGTCCAGCG AAAAGTTCGGAGAAGACCTGAGTGACAACACGTGGGAGTACATCAGTG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CCAAAAAGCCCGTGATGAGAGATCAAGAGAAAGAAGTCGTTTATGAGTTTAGCACAACGA AAAAGCATTTAGCAGAGGGCCTGCTGCACTCTATTCTCTCAGAACTAAAACTTCAGAAGG CGTCCGTGGAGCGCAGCTACATCCACGCCCTGTGCAGGGTGTACGTGGGCGTGTGTCGCC AGCTGGGGGACCTGGAGAGGGCGCGCCTGTTCTGCTACAGCCTGCTGAAGGAAGATTTTC CAGAGTCTGAAAAACTGACGTCGTGCCACATGTTGGTGTGGCACGACGTGTTCATCTCAC CGTCGGCGATTAACCAGGCCATGCAGTTGGTGGCCCGGCAGCGCGCCCGCGGGGAGGTCC TGAACTGCCTGCGAGCGTTCCTCAGCTGGGAGAAGAACGCTCCTCTAGATGTGGGCTTCA TGGTCTCTAAGCTGCTTCTGACCATACAGTTGTGTCCAAACACAGAGTTTCAGTCCAGCG AAAAGTTCGGAGAAGACCTGAGTGACAACACGTGGGAGTACATCAGTG |
| Aligned organism(s): 33 entry(ies) | More info |
| Aligned organism(s): 33 entry(ies) | Help | Less info |
| 64-234, gnl|bosTau2|chr20 (40032388-40032218) | |
| 64-234, gnl|canFam2|chr34 (11074949-11074760) | |
| 64-234, gnl|danRer3|chr16 (3982938-3983117) | |
| 64-234, gnl|echTel1|scaffold_272521 (5479-5293) | |
| 64-234, gnl|galGal2|chr2 (55173456-55173268) | |
| 64-234, gnl|hg17|chr5 (5519435-5519624) | |
| 64-234, gnl|Hg17|chr5 (5519445-5519615) | |
| 64-234, gnl|loxAfr1|scaffold_151840 (4638-4830) | |
| 64-234, gnl|mm7|chr13 (67530266-67530080) | |
| 64-234, gnl|Mm7|chr13 (67530254-67530084) | |
| 64-234, gnl|monDom2|scaffold_4 (23200595-23200782) | |
| 64-234, gnl|oryCun1|scaffold_176810 (42377-42568) | |
| 64-234, gnl|panTro1|chr4_random (36682654-36682843) | |
| 64-234, gnl|rheMac2|chr6 (5391813-5392002) | |
| 64-234, gnl|rn3|chr17 (2798928-2799114) | |
| 64-234, gnl|tetNig1|chr8 (4164374-4164185) | |
| 64-234, gnl|xenTro1|scaffold_470 (408973-408793) | |
| 394-528, gnl|bosTau2|chr20 (40023989-40023855) | |
| 394-528, gnl|canFam2|chr34 (11068069-11067972) | |
| 394-528, gnl|danRer3|chr16 (3983574-3983663) | |
| 394-528, gnl|dasNov1|scaffold_36273 (4996-5093) | |
| 394-528, gnl|galGal2|chr2 (55165376-55165279) | |
| 394-528, gnl|hg17|chr5 (5526666-5526763) | |
| 394-528, gnl|Hg17|chr5 (5526669-5526803) | |
| 394-528, gnl|loxAfr1|scaffold_148123 (421-324) | |
| 394-528, gnl|mm7|chr13 (67525368-67525271) | |
| 394-528, gnl|Mm7|chr13 (67525363-67525229) | |
| 394-528, gnl|monDom2|scaffold_4 (23211115-23211212) | |
| 394-528, gnl|oryCun1|scaffold_176810 (49523-49620) | |
| 394-528, gnl|panTro1|chr4_random (36689939-36690036) | |
| 394-528, gnl|rheMac2|chr6 (5400032-5400129) | |
| 394-528, gnl|rn3|chr17 (2803824-2803921) | |
| 394-528, gnl|xenTro1|scaffold_470 (406022-405925) |
| Aligned organism(s): 33 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 64-234, gnl|bosTau2|chr20 (40032388-40032218) | |
| 64-234, gnl|canFam2|chr34 (11074949-11074760) | |
| 64-234, gnl|danRer3|chr16 (3982938-3983117) | |
| 64-234, gnl|echTel1|scaffold_272521 (5479-5293) | |
| 64-234, gnl|galGal2|chr2 (55173456-55173268) | |
| 64-234, gnl|hg17|chr5 (5519435-5519624) | |
| 64-234, gnl|Hg17|chr5 (5519445-5519615) | |
| 64-234, gnl|loxAfr1|scaffold_151840 (4638-4830) | |
| 64-234, gnl|mm7|chr13 (67530266-67530080) | |
| 64-234, gnl|Mm7|chr13 (67530254-67530084) | |
| 64-234, gnl|monDom2|scaffold_4 (23200595-23200782) | |
| 64-234, gnl|oryCun1|scaffold_176810 (42377-42568) | |
| 64-234, gnl|panTro1|chr4_random (36682654-36682843) | |
| 64-234, gnl|rheMac2|chr6 (5391813-5392002) | |
| 64-234, gnl|rn3|chr17 (2798928-2799114) | |
| 64-234, gnl|tetNig1|chr8 (4164374-4164185) | |
| 64-234, gnl|xenTro1|scaffold_470 (408973-408793) | |
| 394-528, gnl|bosTau2|chr20 (40023989-40023855) | |
| 394-528, gnl|canFam2|chr34 (11068069-11067972) | |
| 394-528, gnl|danRer3|chr16 (3983574-3983663) | |
| 394-528, gnl|dasNov1|scaffold_36273 (4996-5093) | |
| 394-528, gnl|galGal2|chr2 (55165376-55165279) | |
| 394-528, gnl|hg17|chr5 (5526666-5526763) | |
| 394-528, gnl|Hg17|chr5 (5526669-5526803) | |
| 394-528, gnl|loxAfr1|scaffold_148123 (421-324) | |
| 394-528, gnl|mm7|chr13 (67525368-67525271) | |
| 394-528, gnl|Mm7|chr13 (67525363-67525229) | |
| 394-528, gnl|monDom2|scaffold_4 (23211115-23211212) | |
| 394-528, gnl|oryCun1|scaffold_176810 (49523-49620) | |
| 394-528, gnl|panTro1|chr4_random (36689939-36690036) | |
| 394-528, gnl|rheMac2|chr6 (5400032-5400129) | |
| 394-528, gnl|rn3|chr17 (2803824-2803921) | |
| 394-528, gnl|xenTro1|scaffold_470 (406022-405925) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| jej (0.0989218) |