Ss1.1-Pig4-TMW8032G10.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GAACATACCGAGATTGATCACTGGTTGGAGTTTAGTGCTACGAAACTGTCTTCAAGTGAT TTGTTTACCTCTGCAGTCAAGGAGCTCAATCATTGCCTGTCTCTGAGAACATACTTAGTT GGGAATTCCTTGAGCTTAGCAGATTTGTGTGTTTGGGCTACCCTAAAAGGAAATGCTGCG TGGCAGGAGCAGTTGCAACAGAACAAAGCGCCAGTTCATGTTAAACGCTGGTTTGGCTTT CTTGAAGCCCAGCGGGCCTTCCAGTCAGTAGGTACCAAGTGGAATGCTTCAACCACCAAG GCTAAAGTGGTACCTGAGAAAAAGCAAGATGTTGGAAAGTTTGTTGAGCTTCCAGGTGCT GAGATGGGAAAGGTTACTGTCAGATTTCCTCCAGAGGCTAGTGGTTACTTACACATTGGG CATGCAAAAGCTGCTCTTCTGAACCAGCACTACCAGGTTAACTTTAAAGGGAAACTGATC ATGAGATTTGATGACACAAATCCTGAGAAAGAAAAGGAAGATTTTGAGAAGGTTATCTTG GAAGATGTCGCAATGTTGCATATCAAACCCGATCAATTTACTTACACCTCGGATCATTTT GAAACTATAATGAAATATGCCGAGAAGCTAATTCAGGAAGGGAAAGCTTATGTGGATGAT ACGCCTGCCGAGCAGATGAAAGCAGAGCGTGAGCAGAGGATAGAATCCAAACACAGAGCA AACTCTGTTGAGAAGAATCTACAAATGTGGGAAGAAATGAAAAAGGGAAGCCAGTTTGGT CAGTCCTGTTGTTTGCGAGCGAAAATTGACATGAGCAGTAATAACGGGTGCATGAGGGAT CCAACGCTTTATCGCTGCAAAATTCAACCCCACCCAAGAACTGGAAATAAATACAATGTT TATCCAACGTAC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GAACATACCGAGATTGATCACTGGTTGGAGTTTAGTGCTACGAAACTGTCTTCAAGTGAT TTGTTTACCTCTGCAGTCAAGGAGCTCAATCATTGCCTGTCTCTGAGAACATACTTAGTT GGGAATTCCTTGAGCTTAGCAGATTTGTGTGTTTGGGCTACCCTAAAAGGAAATGCTGCG TGGCAGGAGCAGTTGCAACAGAACAAAGCGCCAGTTCATGTTAAACGCTGGTTTGGCTTT CTTGAAGCCCAGCGGGCCTTCCAGTCAGTAGGTACCAAGTGGAATGCTTCAACCACCAAG GCTAAAGTGGTACCTGAGAAAAAGCAAGATGTTGGAAAGTTTGTTGAGCTTCCAGGTGCT GAGATGGGAAAGGTTACTGTCAGATTTCCTCCAGAGGCTAGTGGTTACTTACACATTGGG CATGCAAAAGCTGCTCTTCTGAACCAGCACTACCAGGTTAACTTTAAAGGGAAACTGATC ATGAGATTTGATGACACAAATCCTGAGAAAGAAAAGGAAGATTTTGAGAAGGTTATCTTG GAAGATGTCGCAATGTTGCATATCAAACCCGATCAATTTACTTACACCTCGGATCATTTT GAAACTATAATGAAATATGCCGAGAAGCTAATTCAGGAAGGGAAAGCTTATGTGGATGAT ACGCCTGCCGAGCAGATGAAAGCAGAGCGTGAGCAGAGGATAGAATCCAAACACAGAGCA AACTCTGTTGAGAAGAATCTACAAATGTGGGAAGAAATGAAAAAGGGAAGCCAGTTTGGT CAGTCCTGTTGTTTGCGAGCGAAAATTGACATGAGCAGTAATAACGGGTGCATGAGGGAT CCAACGCTTTATCGCTGCAAAATTCAACCCCACCCAAGAACTGGAAATAAATACAATGTT TATCCAACGTAC |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 21 entry(ies) | More info |
| Aligned organism(s): 21 entry(ies) | Help | Less info |
| 11-170, gnl|bosTau2|chr16 (11504984-11505143) | |
| 11-170, gnl|Hg17|chr1 (216595397-216595238) | |
| 11-170, gnl|Mm7|chr1 (184896466-184896625) | |
| 530-724, gnl|bosTau2|chr16 (11512439-11512633) | |
| 530-724, gnl|canFam2|chr38 (17805901-17806105) | |
| 530-724, gnl|danRer3|chr17 (42147593-42147800) | |
| 530-724, gnl|dasNov1|scaffold_2795 (98857-98653) | |
| 530-724, gnl|echTel1|scaffold_319634 (35707-35503) | |
| 530-724, gnl|fr1|chrUn (163969165-163968958) | |
| 530-724, gnl|galGal2|chr3 (15168881-15168677) | |
| 530-724, gnl|hg17|chr1 (216585996-216586200) | |
| 530-724, gnl|Hg17|chr1 (216586195-216586001) | |
| 530-724, gnl|loxAfr1|scaffold_2655 (88616-88820) | |
| 530-724, gnl|mm7|chr1 (184905323-184905119) | |
| 530-724, gnl|Mm7|chr1 (184905122-184905316) | |
| 530-724, gnl|monDom2|scaffold_13 (26143896-26144100) | |
| 530-724, gnl|panTro1|chr1 (200311098-200311302) | |
| 530-724, gnl|rheMac2|chr1 (150362603-150362399) | |
| 530-724, gnl|rn3|chr13 (101582813-101582609) | |
| 530-724, gnl|tetNig1|chrUn_random (136427459-136427659) | |
| 530-724, gnl|xenTro1|scaffold_39 (2601407-2601611) |
| Aligned organism(s): 21 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 11-170, gnl|bosTau2|chr16 (11504984-11505143) | |
| 11-170, gnl|Hg17|chr1 (216595397-216595238) | |
| 11-170, gnl|Mm7|chr1 (184896466-184896625) | |
| 530-724, gnl|bosTau2|chr16 (11512439-11512633) | |
| 530-724, gnl|canFam2|chr38 (17805901-17806105) | |
| 530-724, gnl|danRer3|chr17 (42147593-42147800) | |
| 530-724, gnl|dasNov1|scaffold_2795 (98857-98653) | |
| 530-724, gnl|echTel1|scaffold_319634 (35707-35503) | |
| 530-724, gnl|fr1|chrUn (163969165-163968958) | |
| 530-724, gnl|galGal2|chr3 (15168881-15168677) | |
| 530-724, gnl|hg17|chr1 (216585996-216586200) | |
| 530-724, gnl|Hg17|chr1 (216586195-216586001) | |
| 530-724, gnl|loxAfr1|scaffold_2655 (88616-88820) | |
| 530-724, gnl|mm7|chr1 (184905323-184905119) | |
| 530-724, gnl|Mm7|chr1 (184905122-184905316) | |
| 530-724, gnl|monDom2|scaffold_13 (26143896-26144100) | |
| 530-724, gnl|panTro1|chr1 (200311098-200311302) | |
| 530-724, gnl|rheMac2|chr1 (150362603-150362399) | |
| 530-724, gnl|rn3|chr13 (101582813-101582609) | |
| 530-724, gnl|tetNig1|chrUn_random (136427459-136427659) | |
| 530-724, gnl|xenTro1|scaffold_39 (2601407-2601611) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| cje (0.165235) |