Ss1.1-Pig4-TMW8032J12.3
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| TGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATTTGGGTTGTGCA AACTATGGTGAAATACTTGAACGCGAACGGTGAGTCCTGCAGCCTCCAGGGTGTCCGCGG GGTGGACGCCCGGCGCACGCCGTTGCTTGGCTTTGACCCGTGGGCCTGCTTCCCGTTGGT TTCAGGACGCGACCCCGCGCAGCGTGAGCCGTGAGGCCGCTGGGGCGCCCGCGGTGCCTC CCCCTAAAGAAGCGAGCCGGGGCGGCGTCCCGTGGGGAAAATGAGCGGCACCAGCGCCAG GTCCAGCCACCTGTCTCAGCCGGTCGTGAAGAGCGTGCTGGTGTACCGCAACGGGGACCC CTTCTTCGCGGGGCGCCGCGTTGTCATCCACGAGAAGAAGGTGTCCAGCTTCGACGTCTT CCTCAAGGAGGTGACAGGCGGCGTTCAAGCTCCCTTTGGGGCCGTCAGGAACATCTACAC CCCGCGGACCGGGCACCGCATCCGGAAGCTAGACCAGCTCGAGAGCGGCGGCAACTACGT GGCTGGGGGCCAGGAAGCCTTCAAGAAACTCAATTACTTGGACATAGGAGAAATGAAGAA AAGACCAATGGATGCTGTGAATACAGAGGTAAAACCAGTTATCCACAGCAAGATCAACGT TTCAGCTCGCTTTAGAAAGCCACTTCTGGAACCCTGCACTATCTTCTTGATTGCAAATGG AGACCTCATAAACCCAGCTTCTCGACTCCTCATTCCTAGAAAAGCCTTGAATCAGTGGGA TCATGTACTACAAATGGTCACGGAAAAAATAACGCTGAGAAGTGGGGCTGTCCACAGACT TTATACTTTAGAAGGAAAACTGGTTGAGAGTGGGGCAGAGTTGGAGAATGGGCAGTTTTA TGTGGCTGTCGGCAGAGATAAGTTTAAGAAATTGCCTTACGGTGAATTACTTTTTGACAA GTCAACAATGAGAAGGTCTTATGGTCAGAAAGCCTCTTCACTACCTCCTATTGTAGGATC CAGAAAGTCTAAAGGGAGTGGAAATGATCGACAGTCTAAGTCAACAGTTGGATCCAGTGA CAACTCATCTCCTCAGCCCCCAAA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| TGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATTTGGGTTGTGCA AACTATGGTGAAATACTTGAACGCGAACGGTGAGTCCTGCAGCCTCCAGGGTGTCCGCGG GGTGGACGCCCGGCGCACGCCGTTGCTTGGCTTTGACCCGTGGGCCTGCTTCCCGTTGGT TTCAGGACGCGACCCCGCGCAGCGTGAGCCGTGAGGCCGCTGGGGCGCCCGCGGTGCCTC CCCCTAAAGAAGCGAGCCGGGGCGGCGTCCCGTGGGGAAAATGAGCGGCACCAGCGCCAG GTCCAGCCACCTGTCTCAGCCGGTCGTGAAGAGCGTGCTGGTGTACCGCAACGGGGACCC CTTCTTCGCGGGGCGCCGCGTTGTCATCCACGAGAAGAAGGTGTCCAGCTTCGACGTCTT CCTCAAGGAGGTGACAGGCGGCGTTCAAGCTCCCTTTGGGGCCGTCAGGAACATCTACAC CCCGCGGACCGGGCACCGCATCCGGAAGCTAGACCAGCTCGAGAGCGGCGGCAACTACGT GGCTGGGGGCCAGGAAGCCTTCAAGAAACTCAATTACTTGGACATAGGAGAAATGAAGAA AAGACCAATGGATGCTGTGAATACAGAGGTAAAACCAGTTATCCACAGCAAGATCAACGT TTCAGCTCGCTTTAGAAAGCCACTTCTGGAACCCTGCACTATCTTCTTGATTGCAAATGG AGACCTCATAAACCCAGCTTCTCGACTCCTCATTCCTAGAAAAGCCTTGAATCAGTGGGA TCATGTACTACAAATGGTCACGGAAAAAATAACGCTGAGAAGTGGGGCTGTCCACAGACT TTATACTTTAGAAGGAAAACTGGTTGAGAGTGGGGCAGAGTTGGAGAATGGGCAGTTTTA TGTGGCTGTCGGCAGAGATAAGTTTAAGAAATTGCCTTACGGTGAATTACTTTTTGACAA GTCAACAATGAGAAGGTCTTATGGTCAGAAAGCCTCTTCACTACCTCCTATTGTAGGATC CAGAAAGTCTAAAGGGAGTGGAAATGATCGACAGTCTAAGTCAACAGTTGGATCCAGTGA CAACTCATCTCCTCAGCCCCCAAA |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 20 entry(ies) | More info |
| Aligned organism(s): 20 entry(ies) | Help | Less info |
| 52-573, gnl|bosTau2|chr23 (26907213-26907741) | |
| 52-573, gnl|Hg17|chr6 (24466195-24465665) | |
| 52-573, gnl|Mm7|chr13 (24421912-24422365) | |
| 835-1002, gnl|bosTau2|chr23 (26962248-26962416) | |
| 835-1002, gnl|canFam2|chr35 (25388768-25388963) | |
| 835-1002, gnl|dasNov1|scaffold_45232 (4089-3938) | |
| 835-1002, gnl|echTel1|scaffold_304239 (6986-6791) | |
| 835-1002, gnl|fr1|chrUn (152046977-152047157) | |
| 835-1002, gnl|galGal2|chr2 (57709651-57709477) | |
| 835-1002, gnl|hg17|chr6 (24399120-24399315) | |
| 835-1002, gnl|Hg17|chr6 (24399288-24399121) | |
| 835-1002, gnl|mm7|chr13 (24473561-24473367) | |
| 835-1002, gnl|Mm7|chr13 (24473390-24473558) | |
| 835-1002, gnl|monDom2|scaffold_3 (114635685-114635881) | |
| 835-1002, gnl|oryCun1|scaffold_200613 (75328-75523) | |
| 835-1002, gnl|panTro1|chr5_random (20532505-20532310) | |
| 835-1002, gnl|rheMac2|chr4 (24301445-24301640) | |
| 835-1002, gnl|rn3|chr17 (47031309-47031504) | |
| 835-1002, gnl|tetNig1|chr8 (4614911-4614745) | |
| 835-1002, gnl|xenTro1|scaffold_500 (173860-173678) |
| Aligned organism(s): 20 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 52-573, gnl|bosTau2|chr23 (26907213-26907741) | |
| 52-573, gnl|Hg17|chr6 (24466195-24465665) | |
| 52-573, gnl|Mm7|chr13 (24421912-24422365) | |
| 835-1002, gnl|bosTau2|chr23 (26962248-26962416) | |
| 835-1002, gnl|canFam2|chr35 (25388768-25388963) | |
| 835-1002, gnl|dasNov1|scaffold_45232 (4089-3938) | |
| 835-1002, gnl|echTel1|scaffold_304239 (6986-6791) | |
| 835-1002, gnl|fr1|chrUn (152046977-152047157) | |
| 835-1002, gnl|galGal2|chr2 (57709651-57709477) | |
| 835-1002, gnl|hg17|chr6 (24399120-24399315) | |
| 835-1002, gnl|Hg17|chr6 (24399288-24399121) | |
| 835-1002, gnl|mm7|chr13 (24473561-24473367) | |
| 835-1002, gnl|Mm7|chr13 (24473390-24473558) | |
| 835-1002, gnl|monDom2|scaffold_3 (114635685-114635881) | |
| 835-1002, gnl|oryCun1|scaffold_200613 (75328-75523) | |
| 835-1002, gnl|panTro1|chr5_random (20532505-20532310) | |
| 835-1002, gnl|rheMac2|chr4 (24301445-24301640) | |
| 835-1002, gnl|rn3|chr17 (47031309-47031504) | |
| 835-1002, gnl|tetNig1|chr8 (4614911-4614745) | |
| 835-1002, gnl|xenTro1|scaffold_500 (173860-173678) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| ova (0.129132) |