Non-Coding RNA Search

Ss1.1-Pig4-TMW8032L06.3

Sequence:


               
               GCAGCGACGTGCCTGCCGATTACCTCTTGTGTGATGTGGAGGGTGAGGACGATGAGCTGT
ACCTGCTGGACCCTGAACACACGCACTCCGAGGAGCCCGAGTACGTGCTGCCCCAGGAGG
CCTTTCCGCTGCGCCACGAGATCGTGGACACTCCCCCCGGGCCCGAGCACCTGCAGGACA
AGGCCGACTCGCCCCACGTGAGCGGCAGTGAGGCAGACGTGGCCTCCCTGGTGCCCATGG
ACTCTTCCTTCTCCCTCATCTCGGTCTCGCACGCGCTGTATGACAGCCGCCTGCCGCCTG
CGTTCTTCAGCGCTCTGGTGTGTGACATGCTCCACTTCTACGCTGAGCAGGGGGACGTGC
AGATGGCCGTGTCGGTGCTCGTTGTGCTGGGGGAGCGCGTGCGCAAGGACATCGACGAGC
AGACCCAGGAGCACTGGTACACATCCTACATCGACCTGCTGCAGCGCTTCTGCCTGTGGA
ACGTGTCCAACCAGGTGGTCAAGCTCAGCACCAGCCGCGCCATCAGCTGCCTCAACCAGG
CCTCTACCACCCTGCATGTCAACTGCAGCCACTGCAAACGGCCCATGAGCAGCCGGGGCT
GGGTCTGTGACAGGTGCCACCGCTGCGCCAGCATGTGCGCCGTCTGCCACCACGTGGTCA
AGGGTCTGTTCGTGTGGTGCCAGGGGTGCAGTCACGGCGGCCACCTGCAGCACATCATGA
AATGGCTGGAGGGCAGCTCCCACTGTCCCGCCGGCTGCGGCCACCTGTGCGAGTACTCCT
GACCCCCCTGCGGGACCGGGAGGGGAGGGGTGGGCTTTTGAACCAAATAAAGAAAGTGGG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GCAGCGACGTGCCTGCCGATTACCTCTTGTGTGATGTGGAGGGTGAGGACGATGAGCTGT
ACCTGCTGGACCCTGAACACACGCACTCCGAGGAGCCCGAGTACGTGCTGCCCCAGGAGG
CCTTTCCGCTGCGCCACGAGATCGTGGACACTCCCCCCGGGCCCGAGCACCTGCAGGACA
AGGCCGACTCGCCCCACGTGAGCGGCAGTGAGGCAGACGTGGCCTCCCTGGTGCCCATGG
ACTCTTCCTTCTCCCTCATCTCGGTCTCGCACGCGCTGTATGACAGCCGCCTGCCGCCTG
CGTTCTTCAGCGCTCTGGTGTGTGACATGCTCCACTTCTACGCTGAGCAGGGGGACGTGC
AGATGGCCGTGTCGGTGCTCGTTGTGCTGGGGGAGCGCGTGCGCAAGGACATCGACGAGC
AGACCCAGGAGCACTGGTACACATCCTACATCGACCTGCTGCAGCGCTTCTGCCTGTGGA
ACGTGTCCAACCAGGTGGTCAAGCTCAGCACCAGCCGCGCCATCAGCTGCCTCAACCAGG
CCTCTACCACCCTGCATGTCAACTGCAGCCACTGCAAACGGCCCATGAGCAGCCGGGGCT
GGGTCTGTGACAGGTGCCACCGCTGCGCCAGCATGTGCGCCGTCTGCCACCACGTGGTCA
AGGGTCTGTTCGTGTGGTGCCAGGGGTGCAGTCACGGCGGCCACCTGCAGCACATCATGA
AATGGCTGGAGGGCAGCTCCCACTGTCCCGCCGGCTGCGGCCACCTGTGCGAGTACTCCT
GACCCCCCTGCGGGACCGGGAGGGGAGGGGTGGGCTTTTGAACCAAATAAAGAAAGTGGG

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

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               90-429, gnl|bosTau2|chr25 (1212835-1213174)
               

               
               90-429, gnl|Hg17|chr16 (675596-675257)
               

               
               90-429, gnl|Mm7|chr17 (24010895-24011234)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               90-429, gnl|bosTau2|chr25 (1212835-1213174)
               

               
               90-429, gnl|Hg17|chr16 (675596-675257)
               

               
               90-429, gnl|Mm7|chr17 (24010895-24011234)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               ece (0.229305)
               

               
               fty (0.17584)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ece (0.229305)
               

               
               fty (0.17584)

	90-429, gnl\|bosTau2\|chr25 (1212835-1213174)
	90-429, gnl\|Hg17\|chr16 (675596-675257)
	90-429, gnl\|Mm7\|chr17 (24010895-24011234)