Non-Coding RNA Search

Ss1.1-Pig4-TMW8032L22.3

Sequence:


               
               CCCTTTTTTCTTTAAATTTTATACAAAGCACTTTAATGATAGATGCAACTTAATTTTTCA
GATTTTTCTTTCTTTGTTTAAAGACCACACATTTACTAATGTTAATATGAAGGTAGTAAA
TAGCTTACTGATATTTTATGGATGCAGACAATCCCTGCACAACCACTTCTTATAATACTC
ATTTATTTCTTTAAATATTGCTTCAAAAGGAAGATGGGGATATAAACCCTGATTTTTTTT
TTCCTCCCAAGTAAAATCTTAAATGACCACTTTAGACAATATTTGATTCCTACTGTAAAA
TTTAGAAAATAATGAATTTTTGTCCATTTTTGTAATCAAGATTTTAGGGAAAACAGAAGT
ACATCTATCTTTAATGAAATATTGGGCAGGTTTTTATGTATCAATATTTTGTACTTTTTA
GGGAATATTTTATTTTTTAGTGATTTTTGTCAAATTATAATTTTAAAAGGTACAGCAGAG
AATATACCATGTTTTTATATAGGTTCACACCTGTACTTAGGAGGGACCCTGTCCATCTAT
ATACTTTTTGTATGAAATTTTAAAATGCTGAAGATCCACAAAGTCATAATAAAATGCTTT
TATAGCTAGAAAAACATTTACCCTTCCCAGTGCTTTGCACTAAAATATACTGTGAAAGGA
AACTAGAAAGACTGTACTGTTGCTGGAAATGTTCTATATTGAATGTACATGCTCTTGTTG
GAAATGTACTATATGTGATGGAAATAAACCAGACTC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CCCTTTTTTCTTTAAATTTTATACAAAGCACTTTAATGATAGATGCAACTTAATTTTTCA
GATTTTTCTTTCTTTGTTTAAAGACCACACATTTACTAATGTTAATATGAAGGTAGTAAA
TAGCTTACTGATATTTTATGGATGCAGACAATCCCTGCACAACCACTTCTTATAATACTC
ATTTATTTCTTTAAATATTGCTTCAAAAGGAAGATGGGGATATAAACCCTGATTTTTTTT
TTCCTCCCAAGTAAAATCTTAAATGACCACTTTAGACAATATTTGATTCCTACTGTAAAA
TTTAGAAAATAATGAATTTTTGTCCATTTTTGTAATCAAGATTTTAGGGAAAACAGAAGT
ACATCTATCTTTAATGAAATATTGGGCAGGTTTTTATGTATCAATATTTTGTACTTTTTA
GGGAATATTTTATTTTTTAGTGATTTTTGTCAAATTATAATTTTAAAAGGTACAGCAGAG
AATATACCATGTTTTTATATAGGTTCACACCTGTACTTAGGAGGGACCCTGTCCATCTAT
ATACTTTTTGTATGAAATTTTAAAATGCTGAAGATCCACAAAGTCATAATAAAATGCTTT
TATAGCTAGAAAAACATTTACCCTTCCCAGTGCTTTGCACTAAAATATACTGTGAAAGGA
AACTAGAAAGACTGTACTGTTGCTGGAAATGTTCTATATTGAATGTACATGCTCTTGTTG
GAAATGTACTATATGTGATGGAAATAAACCAGACTC

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

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               1-756, gnl|bosTau2|chr4 (48368967-48368203)
               

               
               1-756, gnl|Hg17|chr7 (126605122-126604373)
               

               
               1-756, gnl|Mm7|chr6 (28173128-28172392)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-756, gnl|bosTau2|chr4 (48368967-48368203)
               

               
               1-756, gnl|Hg17|chr7 (126605122-126604373)
               

               
               1-756, gnl|Mm7|chr6 (28173128-28172392)

Expressed library(ies): 3 entry(ies)

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Expressed library(ies): 3 entry(ies)

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               mgm (0.180343)
               

               
               liv (0.146284)
               

               
               lin (0.145603)

Expressed library(ies): 3 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               mgm (0.180343)
               

               
               liv (0.146284)
               

               
               lin (0.145603)

	1-756, gnl\|bosTau2\|chr4 (48368967-48368203)
	1-756, gnl\|Hg17\|chr7 (126605122-126604373)
	1-756, gnl\|Mm7\|chr6 (28173128-28172392)